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HNOSeg-XS: Extremely Small Hartley Neural Operator for Efficient and Resolution-Robust 3D Image Segmentation

Ken C. L. Wong, Hongzhi Wang, Tanveer Syeda-Mahmood

arxiv logopreprintJul 10 2025
In medical image segmentation, convolutional neural networks (CNNs) and transformers are dominant. For CNNs, given the local receptive fields of convolutional layers, long-range spatial correlations are captured through consecutive convolutions and pooling. However, as the computational cost and memory footprint can be prohibitively large, 3D models can only afford fewer layers than 2D models with reduced receptive fields and abstract levels. For transformers, although long-range correlations can be captured by multi-head attention, its quadratic complexity with respect to input size is computationally demanding. Therefore, either model may require input size reduction to allow more filters and layers for better segmentation. Nevertheless, given their discrete nature, models trained with patch-wise training or image downsampling may produce suboptimal results when applied on higher resolutions. To address this issue, here we propose the resolution-robust HNOSeg-XS architecture. We model image segmentation by learnable partial differential equations through the Fourier neural operator which has the zero-shot super-resolution property. By replacing the Fourier transform by the Hartley transform and reformulating the problem in the frequency domain, we created the HNOSeg-XS model, which is resolution robust, fast, memory efficient, and extremely parameter efficient. When tested on the BraTS'23, KiTS'23, and MVSeg'23 datasets with a Tesla V100 GPU, HNOSeg-XS showed its superior resolution robustness with fewer than 34.7k model parameters. It also achieved the overall best inference time (< 0.24 s) and memory efficiency (< 1.8 GiB) compared to the tested CNN and transformer models.

An Enhanced Privacy-preserving Federated Few-shot Learning Framework for Respiratory Disease Diagnosis

Ming Wang, Zhaoyang Duan, Dong Xue, Fangzhou Liu, Zhongheng Zhang

arxiv logopreprintJul 10 2025
The labor-intensive nature of medical data annotation presents a significant challenge for respiratory disease diagnosis, resulting in a scarcity of high-quality labeled datasets in resource-constrained settings. Moreover, patient privacy concerns complicate the direct sharing of local medical data across institutions, and existing centralized data-driven approaches, which rely on amounts of available data, often compromise data privacy. This study proposes a federated few-shot learning framework with privacy-preserving mechanisms to address the issues of limited labeled data and privacy protection in diagnosing respiratory diseases. In particular, a meta-stochastic gradient descent algorithm is proposed to mitigate the overfitting problem that arises from insufficient data when employing traditional gradient descent methods for neural network training. Furthermore, to ensure data privacy against gradient leakage, differential privacy noise from a standard Gaussian distribution is integrated into the gradients during the training of private models with local data, thereby preventing the reconstruction of medical images. Given the impracticality of centralizing respiratory disease data dispersed across various medical institutions, a weighted average algorithm is employed to aggregate local diagnostic models from different clients, enhancing the adaptability of a model across diverse scenarios. Experimental results show that the proposed method yields compelling results with the implementation of differential privacy, while effectively diagnosing respiratory diseases using data from different structures, categories, and distributions.

Understanding Dataset Bias in Medical Imaging: A Case Study on Chest X-rays

Ethan Dack, Chengliang Dai

arxiv logopreprintJul 10 2025
Recent works have revisited the infamous task ``Name That Dataset'', demonstrating that non-medical datasets contain underlying biases and that the dataset origin task can be solved with high accuracy. In this work, we revisit the same task applied to popular open-source chest X-ray datasets. Medical images are naturally more difficult to release for open-source due to their sensitive nature, which has led to certain open-source datasets being extremely popular for research purposes. By performing the same task, we wish to explore whether dataset bias also exists in these datasets. To extend our work, we apply simple transformations to the datasets, repeat the same task, and perform an analysis to identify and explain any detected biases. Given the importance of AI applications in medical imaging, it's vital to establish whether modern methods are taking shortcuts or are focused on the relevant pathology. We implement a range of different network architectures on the datasets: NIH, CheXpert, MIMIC-CXR and PadChest. We hope this work will encourage more explainable research being performed in medical imaging and the creation of more open-source datasets in the medical domain. Our code can be found here: https://github.com/eedack01/x_ray_ds_bias.

Automated Detection of Lacunes in Brain MR Images Using SAM with Robust Prompts via Self-Distillation and Anatomy-Informed Priors

Deepika, P., Shanker, G., Narayanan, R., Sundaresan, V.

medrxiv logopreprintJul 10 2025
Lacunes, which are small fluid-filled cavities in the brain, are signs of cerebral small vessel disease and have been clinically associated with various neurodegenerative and cerebrovascular diseases. Hence, accurate detection of lacunes is crucial and is one of the initial steps for the precise diagnosis of these diseases. However, developing a robust and consistently reliable method for detecting lacunes is challenging because of the heterogeneity in their appearance, contrast, shape, and size. To address the above challenges, in this study, we propose a lacune detection method using the Segment Anything Model (SAM), guided by point prompts from a candidate prompt generator. The prompt generator initially detects potential lacunes with a high sensitivity using a composite loss function. The SAM model selects true lacunes by delineating their characteristics from mimics such as the sulcus and enlarged perivascular spaces, imitating the clinicians strategy of examining the potential lacunes along all three axes. False positives were further reduced by adaptive thresholds based on the region-wise prevalence of lacunes. We evaluated our method on two diverse, multi-centric MRI datasets, VALDO and ISLES, comprising only FLAIR sequences. Despite diverse imaging conditions and significant variations in slice thickness (0.5-6 mm), our method achieved sensitivities of 84% and 92%, with average false positive rates of 0.05 and 0.06 per slice in ISLES and VALDO datasets respectively. The proposed method outperformed the state-of-the-art methods, demonstrating its effectiveness in lacune detection and quantification.

Population-scale cross-sectional observational study for AI-powered TB screening on one million CXRs.

Munjal P, Mahrooqi AA, Rajan R, Jeremijenko A, Ahmad I, Akhtar MI, Pimentel MAF, Khan S

pubmed logopapersJul 9 2025
Traditional tuberculosis (TB) screening involves radiologists manually reviewing chest X-rays (CXR), which is time-consuming, error-prone, and limited by workforce shortages. Our AI model, AIRIS-TB (AI Radiology In Screening TB), aims to address these challenges by automating the reporting of all X-rays without any findings. AIRIS-TB was evaluated on over one million CXRs, achieving an AUC of 98.51% and overall false negative rate (FNR) of 1.57%, outperforming radiologists (1.85%) while maintaining a 0% TB-FNR. By selectively deferring only cases with findings to radiologists, the model has the potential to automate up to 80% of routine CXR reporting. Subgroup analysis revealed insignificant performance disparities across age, sex, HIV status, and region of origin, with sputum tests for suspected TB showing a strong correlation with model predictions. This large-scale validation demonstrates AIRIS-TB's safety and efficiency in high-volume TB screening programs, reducing radiologist workload without compromising diagnostic accuracy.

Development of a deep learning-based MRI diagnostic model for human Brucella spondylitis.

Wang B, Wei J, Wang Z, Niu P, Yang L, Hu Y, Shao D, Zhao W

pubmed logopapersJul 9 2025
Brucella spondylitis (BS) and tuberculous spondylitis (TS) are prevalent spinal infections with distinct treatment protocols. Rapid and accurate differentiation between these two conditions is crucial for effective clinical management; however, current imaging and pathogen-based diagnostic methods fall short of fully meeting clinical requirements. This study explores the feasibility of employing deep learning (DL) models based on conventional magnetic resonance imaging (MRI) to differentiate BS and TS. A total of 310 subjects were enrolled in our hospital, comprising 209 with BS, 101 with TS. The participants were randomly divided into a training set (n = 217) and a test set (n = 93). And 74 with other hospital was external validation set. Integrating Convolutional Block Attention Module (CBAM) into the ResNeXt-50 architecture and training the model using sagittal T2-weighted images (T2WI). Classification performance was evaluated using the area under the receiver operating characteristic (AUC) curve, and diagnostic accuracy was compared against general models such as ResNet50, GoogleNet, EfficientNetV2, and VGG16. The CBAM-ResNeXt model revealed superior performance, with accuracy, precision, recall, F1-score, and AUC from 0.942, 0.940, 0.928, 0.934, 0.953, respectively. These metrics outperformed those of the general models. The proposed model offers promising potential for the diagnosis of BS and TS using conventional MRI. It could serve as an invaluable tool in clinical practice, providing a reliable reference for distinguishing between these two diseases.

Feasibility study of "double-low" scanning protocol combined with artificial intelligence iterative reconstruction algorithm for abdominal computed tomography enhancement in patients with obesity.

Ji MT, Wang RR, Wang Q, Li HS, Zhao YX

pubmed logopapersJul 9 2025
To evaluate the efficacy of the "double-low" scanning protocol combined with the artificial intelligence iterative reconstruction (AIIR) algorithm for abdominal computed tomography (CT) enhancement in obese patients and to identify the optimal AIIR algorithm level. Patients with a body mass index ≥ 30.00 kg/m<sup>2</sup> who underwent abdominal CT enhancement were randomly assigned to groups A or B. Group A underwent conventional protocol with the Karl 3D iterative reconstruction algorithm at levels 3-5. Group B underwent the "double-low" protocol with AIIR algorithm at levels 1-5. Radiation dose, total iodine intake, along with subjective and objective image quality were recorded. The optimal reconstruction levels for arterial-phase and portal-venous-phase images were identified. Comparisons were made in terms of radiation dose, iodine intake, and image quality. Overall, 150 patients with obesity were collected, and each group consisted of 75 cases. Karl 3D level 5 was the optimal algorithm level for group A, while AIIR level 4 was the optimal algorithm level for group B. AIIR level 4 images in group B exhibited significantly superior subjective and objective image quality than those in Karl 3D level 5 images in group A (P < 0.001). Group B showed reductions in mean CT dose index values, dose-length product, size-specific dose estimate based on water-equivalent diameter, and total iodine intake, compared with group A (P < 0.001). The "double-low" scanning protocol combined with the AIIR algorithm significantly reduces radiation dose and iodine intake during abdominal CT enhancement in obese patients. AIIR level 4 is the optimal reconstruction level for arterial-phase and portal-venous-phase in this patient population.

A machine learning model reveals invisible microscopic variation in acute ischaemic stroke (≤ 6 h) with non-contrast computed tomography.

Tan J, Xiao M, Wang Z, Wu S, Han K, Wang H, Huang Y

pubmed logopapersJul 9 2025
In most medical centers, particularly in primary hospitals, non-contrast computed tomography (NCCT) serves as the primary imaging modality for diagnosing acute ischemic stroke. However, due to the small density difference between the infarct and the surrounding normal brain tissue on NCCT images within the initial 6 h post-onset, it poses significant challenges in promptly and accurately positioning and quantifying the infarct at the early stage. To investigate whether a radiomics-based model using NCCT could effectively assess the risk of acute ischemic stroke (AIS). This study proposed a machine learning (ML) for infarct detection, enabling automated quantitative assessment of AIS lesions on NCCT images. In this retrospective study, NCCT images from 228 patients with AIS (< 6 h from onset) were included, and paired with MRI-diffusion-weighted imaging (DWI) images (attained within 1 to 7 days of onset). NCCT and DWI images were co-registered using the Elastix toolbox. The internal dataset (153 AIS patients) included 179 AIS VOIs and 153 non-AIS VOIs as the training and validation groups. Subsequent cases (75 patients) after 2021 served as the independent test set, comprising 94 AIS VOIs and 75 non-AIS VOIs. The random forest (RF) model demonstrated robust diagnostic performance across the training, validation, and independent test sets. The areas under the receiver operating characteristic (ROC) curves were 0.858 (95% CI: 0.808-0.908), 0.829 (95% CI: 0.748-0.910), and 0.789 (95% CI: 0.717-0.860), respectively. Accuracies were 79.399%, 77.778%, and 73.965%, while sensitivities were 81.679%, 77.083%, and 68.085%. Specificities were 76.471%, 78.431%, and 81.333%, respectively. NCCT-based radiomics combined with a machine learning model could discriminate between AIS and non-AIS patients within less than 6 h of onset. This approach holds promise for improving early stroke diagnosis and patient outcomes. Not applicable.

Applying deep learning techniques to identify tonsilloliths in panoramic radiography.

Katı E, Baybars SC, Danacı Ç, Tuncer SA

pubmed logopapersJul 9 2025
Tonsilloliths can be seen on panoramic radiographs (PRs) as deposits located on the middle portion of the ramus of the mandible. Although tonsilloliths are clinically harmless, the high risk of misdiagnosis leads to unnecessary advanced examinations and interventions, thus jeopardizing patient safety and increasing unnecessary resource use in the healthcare system. Therefore, this study aims to meet an important clinical need by providing accurate and rapid diagnostic support. The dataset consisted of a total of 275 PRs, with 125 PRs lacking tonsillolith and 150 PRs having tonsillolith. ResNet and EfficientNet CNN models were assessed during the model selection process. An evaluation was conducted to analyze the learning capacity, intricacy, and compatibility of each model with the problem at hand. The effectiveness of the models was evaluated using accuracy, recall, precision, and F1 score measures following the training phase. Both the ResNet18 and EfficientNetB0 models were able to differentiate between tonsillolith-present and tonsillolith-absent conditions with an average accuracy of 89%. ResNet101 demonstrated underperformance when contrasted with other models. EfficientNetB1 exhibits satisfactory accuracy in both categories. The EfficientNetB0 model exhibits a 93% precision, 87% recall, 90% F1 score, and 89% accuracy. This study indicates that implementing AI-powered deep learning techniques would significantly improve the clinical diagnosis of tonsilloliths.

Enhancing automated detection and classification of dementia in individuals with cognitive impairment using artificial intelligence techniques.

Alotaibi SD, Alharbi AAK

pubmed logopapersJul 9 2025
Dementia is a degenerative and chronic disorder, increasingly prevalent among older adults, posing significant challenges in providing appropriate care. As the number of dementia cases continues to rise, delivering optimal care becomes more complex. Machine learning (ML) plays a crucial role in addressing this challenge by utilizing medical data to enhance care planning and management for individuals at risk of various types of dementia. Magnetic resonance imaging (MRI) is a commonly used method for analyzing neurological disorders. Recent evidence highlights the benefits of integrating artificial intelligence (AI) techniques with MRI, significantly enhancing the diagnostic accuracy for different forms of dementia. This paper explores the use of AI in the automated detection and classification of dementia, aiming to streamline early diagnosis and improve patient outcomes. Integrating ML models into clinical practice can transform dementia care by enabling early detection, personalized treatment plans, and more effectual monitoring of disease progression. In this study, an Enhancing Automated Detection and Classification of Dementia in Thinking Inability Persons using Artificial Intelligence Techniques (EADCD-TIPAIT) technique is presented. The goal of the EADCD-TIPAIT technique is for the detection and classification of dementia in individuals with cognitive impairment using MRI imaging. The EADCD-TIPAIT method performs preprocessing to scale the input data using z-score normalization to obtain this. Next, the EADCD-TIPAIT technique performs a binary greylag goose optimization (BGGO)-based feature selection approach to efficiently identify relevant features that distinguish between normal and dementia-affected brain regions. In addition, the wavelet neural network (WNN) classifier is employed to detect and classify dementia. Finally, the improved salp swarm algorithm (ISSA) is implemented to choose the WNN technique's hyperparameters optimally. The stimulation of the EADCD-TIPAIT technique is examined under a Dementia prediction dataset. The performance validation of the EADCD-TIPAIT approach portrayed a superior accuracy value of 95.00% under diverse measures.
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