Non-alcoholic fatty liver disease (NAFLD) is a significant risk factor for liver cancer and cardiovascular diseases, imposing substantial social and economic burdens. Computed tomography (CT) scans are crucial for diagnosing NAFLD and assessing its severity. However, current manual measurement techniques require considerable human effort and resources from radiologists, and there is a lack of standardized methods for classifying the severity of NAFLD in existing research. To address these challenges, we propose a novel method for NAFLD segmentation and automated severity scoring. The method consists of three key modules: (1) The Semi-automatization nnU-Net Module (SNM) constructs a high-quality dataset by combining manual annotations with semi-automated refinement; (2) The Focal Feature Fusion Swin-Unet Module (FSM) enhances liver and spleen segmentation through multi-scale feature fusion and Swin Transformer-based architectures; (3) The Automated Severity Scoring Module (ASSM) integrates segmentation results with radiological features to classify NAFLD severity. These modules are embedded in a Flask-RESTful API-based system, enabling users to upload abdominal CT data for automated preprocessing, segmentation, and scoring. The Focal Feature Fusion Swin-Unet (FF Swin-Unet) method significantly improves segmentation accuracy, achieving a Dice similarity coefficient (DSC) of 95.64% and a 95th percentile Hausdorff distance (HD95) of 15.94. The accuracy of the automated severity scoring is 90%. With model compression and ONNX deployment, the evaluation speed for each case is approximately 5 seconds. Compared to manual diagnosis, the system can process a large volume of data simultaneously, rapidly, and efficiently while maintaining the same level of diagnostic accuracy, significantly reducing the workload of medical professionals. Our research demonstrates that the proposed system has high accuracy in processing large volumes of CT data and providing automated NAFLD severity scores quickly and efficiently. This method has the potential to significantly reduce the workload of medical professionals and holds immense clinical application potential.

Quantifying diagnostic image quality (IQ) is not straightforward but essential for optimizing the balance between IQ and radiation dose, and for ensuring consistent high-quality images in CT imaging. This review provides a comprehensive overview of advanced objective reference-free IQ assessment methods for CT scans, beyond standard approaches. A literature search was performed in PubMed and Web of Science up to June 2024 to identify studies using advanced objective image quality methods on clinical CT scans. Only reference-free methods, which do not require a predefined reference image, were included. Traditional methods relying on the standard deviation of the Hounsfield units, the signal-to-noise ratio or contrast-to-noise ratio, all within a manually selected region-of-interest, were excluded. Eligible results were categorized by IQ metric (i.e., noise, contrast, spatial resolution and other) and assessment method (manual, automated, and artificial intelligence (AI)-based). Thirty-five studies were included that proposed or employed reference-free IQ methods, identifying 12 noise assessment methods, 4 contrast assessment methods, 14 spatial resolution assessment methods and 7 others, based on manual, automated or AI-based approaches. This review emphasizes the transition from manual to fully automated approaches for IQ assessment, including the potential of AI-based methods, and it provides a reference tool for researchers and radiologists who need to make a well-considered choice in how to evaluate IQ in CT imaging. This review examines the challenge of quantifying diagnostic CT image quality, essential for optimization studies and ensuring consistent high-quality images, by providing an overview of objective reference-free diagnostic image quality assessment methods beyond standard methods. Quantifying diagnostic CT image quality remains a key challenge. This review summarizes objective diagnostic image quality assessment techniques beyond standard metrics. A decision tree is provided to help select optimal image quality assessment techniques.

Super-resolution imaging has emerged as a rapidly advancing field in diagnostic ultrasound. Ultrasound Localization Microscopy (ULM) achieves sub-wavelength precision in microvasculature imaging by tracking gas microbubbles (MBs) flowing through blood vessels. However, MB localization faces challenges due to dynamic point spread functions (PSFs) caused by harmonic and sub-harmonic emissions, as well as depth-dependent PSF variations in ultrasound imaging. Additionally, deep learning models often struggle to generalize from simulated to in vivo data due to significant disparities between the two domains. To address these issues, we propose a novel approach using the DEformable DEtection TRansformer (DE-DETR). This object detection network tackles object deformations by utilizing multi-scale feature maps and incorporating a deformable attention module. We further refine the super-resolution map by employing a KDTree algorithm for efficient MB tracking across consecutive frames. We evaluated our method using both simulated and in vivo data, demonstrating improved precision and recall compared to current state-of-the-art methodologies. These results highlight the potential of our approach to enhance ULM performance in clinical applications.

Multiple Sclerosis (MS) is a chronic autoimmune disease that primarily affects the central nervous system and is predominantly diagnosed in adults, making pediatric cases rare and underrepresented in medical research. This paper introduces the first publicly available MRI dataset specifically dedicated to pediatric multiple sclerosis lesion segmentation. The dataset comprises longitudinal MRI scans from 9 pediatric patients, each with between one and six timepoints, with a total of 28 MRI scans. It includes T1-weighted (MPRAGE), T2-weighted, and FLAIR sequences. Additionally, it provides clinical data and initial symptoms for each patient, offering valuable insights into disease progression. Lesion segmentation was performed by senior experts, ensuring high-quality annotations. To demonstrate the dataset's reliability and utility, we evaluated two deep learning models, achieving competitive segmentation performance. This dataset aims to advance research in pediatric MS, improve lesion segmentation models, and contribute to federated learning approaches.

Early prediction of treatment response can facilitate personalized treatment for breast cancer patients. Studies on the I-SPY 2 clinical trial demonstrate that multi-time point dynamic contrast-enhanced magnetic resonance (DCEMR) imaging improves the accuracy of predicting pathological complete response (pCR) to chemotherapy. However, previous image-based prediction models usually rely on mid- or post-treatment images to ensure the accuracy of prediction, which may outweigh the benefit of response-based adaptive treatment strategy. Accurately predicting the pCR at the early time point is desired yet remains challenging. To improve prediction accuracy at the early time point of treatment, we proposed a two-stage dual-task learning strategy to train a deep neural network for early prediction using only early-treatment data. We developed and evaluated our proposed method using the I-SPY 2 dataset, which included DCEMR images acquired at three time points: pretreatment (T0), after 3 weeks (T1) and 12 weeks of treatment (T2). At the first stage, we trained a convolutional long short-term memory (LSTM) model using all the data to predict pCR and extract the latent space image representation at T2. At the second stage, we trained a dual-task model to simultaneously predict pCR and the image representation at T2 using images from T0 and T1. This allowed us to predict pCR earlier without using images from T2. By using the conventional single-stage single-task strategy, the area under the receiver operating characteristic curve (AUROC) was 0.799. By using the proposed two-stage dual-task learning strategy, the AUROC was improved to 0.820. Our proposed two-stage dual-task learning strategy can improve model performance significantly (p=0.0025) for predicting pCR at the early time point (3rd week) of neoadjuvant chemotherapy for high-risk breast cancer patients. The early prediction model can potentially help physicians to intervene early and develop personalized plans at the early stage of chemotherapy.

As increased nuchal translucency (NT) thickness is notably associated with fetal chromosomal abnormalities, structural defects, and genetic syndromes, accurate measurement of NT thickness is crucial for the screening of fetal abnormalities during the first trimester. We aimed to develop a model for quality assessment of ultrasound images for precise measurement of fetal NT thickness. We collected 2140 ultrasound images of midsagittal sections of the fetal face between 11 and 14 weeks of gestation. Several image segmentation models were trained, and the one exhibiting the highest DSC and HD 95 was chosen to automatically segment the ROI. The radiomics features and deep transfer learning (DTL) features were extracted and selected to construct radiomics and DTL models. Feature screening was conducted using the <i>t</i>-test, Mann-Whitney <i>U</i>-test, Spearman’s rank correlation analysis, and LASSO. We also developed early fusion and late fusion models to integrate the advantages of radiomics and DTL models. The optimal model was compared with junior radiologists. We used SHapley Additive exPlanations (SHAP) to investigate the model’s interpretability. The DeepLabV3 ResNet achieved the best segmentation performance (DSC: 98.07 ± 0.02%, HD 95: 0.75 ± 0.15 mm). The feature fusion model demonstrated the optimal performance (AUC: 0.978, 95% CI: 0.965–0.990, accuracy: 93.2%, sensitivity: 93.1%, specificity: 93.4%, PPV: 93.5%, NPV: 93.0%, precision: 93.5%). This model exhibited more reliable performance compared to junior radiologists and significantly improved the capabilities of junior radiologists. The SHAP summary plot showed DTL features were the most important features for feature fusion model. The proposed models innovatively bridge the gaps in previous studies, achieving intelligent quality assessment of ultrasound images for NT measurement and highly accurate automatic segmentation of ROIs. These models are potential tools to enhance quality control for fetal ultrasound examinations, streamline clinical workflows, and improve the professional skills of less-experienced radiologists. The online version contains supplementary material available at 10.1186/s12884-025-07863-y.

To assess the value of a chest CT-based machine learning model in predicting osteoporotic vertebral fractures (OVFs) of the thoracolumbar vertebral bodies. We monitored 8910 patients aged ≥50 who underwent chest CT (2021-2024), identifying 54 incident OVFs cases. Using propensity score matching, 108 controls were selected. The 162 patients were randomly assigned to training (n=113) and testing (n=49) cohorts. Clinical models were developed through logistic regression. Radiomics features were extracted from the thoracolumbar vertebral bodies (T11-L2), with top 10 features selected via minimum-redundancy maximum-relevancy and the least absolute shrinkage and selection operator to construct a Radscore model. Nomogram model was established combining clinical and radiomics features, evaluated using receiver operating characteristic curves, decision curve analysis (DCA) and calibration plots. Volumetric bone mineral density (vBMD) (OR=0.95, 95%CI=0.93-0.97) and hemoglobin (HGB) (OR=0.96, 95%CI=0.94-0.98) were selected as independent risk factors for clinical model. From 2288 radiomics features, 10 were selected for Radscore calculation. The Nomogram model (Radscore + vBMD + HGB) achieved area under the curve (AUC) of 0.938/0.906 in training/testing cohorts, outperforming both Radscore (AUC=0.902/0.871) and clinical (AUC=0.802/0.820) models. DCA and calibration plots confirmed the Nomogram model's superior prediction capability. Nomogram model combined with radiomics and clinical features has high predictive performance, and its predictive results for thoracolumbar OVFs can provide reference for clinical decision making.

To develop and evaluate a hierarchical deep learning system that detects orbital fractures on computed tomography (CT) images and classifies them as depressed or trap-door types. A retrospective diagnostic accuracy study analyzing CT images from patients with confirmed orbital fractures. We collected CT images from 686 patients with orbital fractures treated at a single institution (2010-2025), resulting in 46,013 orbital CT slices. After preprocessing, 7809 slices were selected as regions of interest and partitioned into training (6508 slices) and test (1301 slices) datasets. Our hierarchical approach consisted of a first-stage classifier (YOLOv8) for fracture detection and a second-stage classifier (Vision Transformer) for distinguishing depressed from trap-door fractures. Performance was evaluated at both slice and patient levels, focusing on accuracy, sensitivity, specificity, and area under the receiver operating characteristic curve (AUC-ROC) at both slice and patient levels. For fracture detection, YOLOv8 achieved a slice-level sensitivity of 80.4 % and specificity of 79.2 %, with patient-level performance improving to 94.7 % sensitivity and 90.0 % specificity. For fracture classification, Vision Transformer demonstrated a slice-level sensitivity of 91.5 % and specificity of 83.5 % for trap-door and depressed fractures, with patient-level metrics of 100 % sensitivity and 88.9 % specificity. The complete system correctly identified 18/20 no-fracture cases, 35/40 depressed fracture cases, and 15/17 trap-door fracture cases. Our hierarchical deep learning system effectively detects orbital fractures and distinguishes between depressed and trap-door types with high accuracy. This approach could aid in the timely identification of trap-door fractures requiring urgent surgical intervention, particularly in settings lacking specialized expertise.

Neurogenetic disorders (NeD) are a group of neurological conditions resulting from inherited genetic defects. By affecting the normal functioning of the nervous system, these diseases lead to serious problems in movement, cognition, and other body functions. In recent years, machine learning (ML) approaches have proven highly effective, enabling the analysis and processing of vast amounts of medical data. By analyzing genetic data, medical imaging, and other clinical data, these techniques can contribute to early diagnosis and more effective treatment of NeD. However, using these approaches is challenged by issues including data variability, model explainability, and the requirement for interdisciplinary collaboration. This paper investigates the impact of ML on healthcare diagnosis and care of common NeD, such as Alzheimer's disease (AD), Parkinson's disease (PD), Huntington's disease (HD), and Multiple Sclerosis disease (MSD). The purpose of this research is to determine the opportunities and challenges of using these techniques in the field of neurogenetic medicine. Our findings show that using ML can increase the detection accuracy by 85 % and reduce the detection time by 60 %. Additionally, the use of these techniques in predicting patient prognosis has been 70 % more accurate than traditional methods. Ultimately, this research will enable medical professionals and researchers to leverage ML approaches in advancing the diagnostic and therapeutic processes of NeD by identifying the opportunities and challenges.

While total intracranial carotid artery calcification (ICAC) volume is an established stroke biomarker, growing evidence shows this aggregate metric ignores the critical influence of plaque location, since calcification in different segments carries distinct prognostic and procedural risks. However, a finer-grained, segment-specific quantification has remained technically infeasible. Conventional 3D models are forced to process downsampled volumes or isolated patches, sacrificing the global context required to resolve anatomical ambiguity and render reliable landmark localization. To overcome this, we reformulate the 3D challenge as a \textbf{Parallel Probabilistic Landmark Localization} task along the 1D axial dimension. We propose the \textbf{Depth-Sequence Transformer (DST)}, a framework that processes full-resolution CT volumes as sequences of 2D slices, learning to predict $N=6$ independent probability distributions that pinpoint key anatomical landmarks. Our DST framework demonstrates exceptional accuracy and robustness. Evaluated on a 100-patient clinical cohort with rigorous 5-fold cross-validation, it achieves a Mean Absolute Error (MAE) of \textbf{0.1 slices}, with \textbf{96\%} of predictions falling within a $\pm1$ slice tolerance. Furthermore, to validate its architectural power, the DST backbone establishes the best result on the public Clean-CC-CCII classification benchmark under an end-to-end evaluation protocol. Our work delivers the first practical tool for automated segment-specific ICAC analysis. The proposed framework provides a foundation for further studies on the role of location-specific biomarkers in diagnosis, prognosis, and procedural planning. Our code will be made publicly available.