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Jafari E, Zarei A, Dadgar H, Keshavarz A, Abdollahi H, Samimi R, Manafi-Farid R, Divband G, Nikkholgh B, Fallahi B, Amini H, Ahmadzadehfar H, Rahmim A, Zohrabi F, Assadi M

pubmed logopapersSep 26 2025
Prostate-specific membrane antigen (PSMA) PET/CT plays an increasing role in prostate cancer management. Radiomics analysis of PSMA PET/CT images may provide additional information for risk stratification. This study aimed to evaluate the performance of PSMA PET/CT radiomics analysis in differentiating between Gleason Grade Groups (GGG 1–3 vs. GGG 4–5) and predicting PSA levels (below vs. at or above 20 ng/ml) in patients with newly diagnosed prostate cancer. In this multicenter study, patients with confirmed primary prostate cancer were enrolled who underwent [68Ga]Ga-PSMA PET/CT for staging. Inclusion criteria required intraprostatic lesions on PET and the International Society of Urological Pathology (ISUP) grade information. Three different segments were delineated including intraprostatic PSMA-avid lesions on PET, the whole prostate in PET, and the whole prostate in CT. Radiomic features (RFs) were extracted from all segments. Dimensionality reduction was achieved through principal component analysis (PCA) prior to model training on data from two centers (186 cases) with 10-fold cross-validation. Model performance was validated with external data set (57 cases) using various machine learning models including random forest, nearest centroid, support vector machine (SVM), calibrated classifier CV and logistic regression. In this retrospective study, 243 patients with a median age of 69 (range: 46–89) were enrolled. For distinguishing GGG 1–3 from GGG 4–5, the nearest centroid classifier using radiomic features (RFs) from whole-prostate PET achieved the best performance in the internal test set, while the random forest classifier using RFs from PSMA-avid lesions in PET performed best in the external test set. However, when considering both internal and external test sets, a calibrated classifier CV using RFs from PSMA-avid PET data showed slightly improved overall performance. Regarding PSA level classification (< 20 ng/ml vs. ≥20 ng/ml), the nearest centroid classifier using RFs from the whole prostate in PET achieved the best performance in the internal test set. In the external test set, the highest performance was observed using RFs derived from the concatenation of PET and CT. Notably, when combining both internal and external test sets, the best performance was again achieved with RFs from the concatenated PET/CT data. Our research suggests that [68Ga]Ga-PSMA PET/CT radiomic features, particularly features derived from intraprostatic PSMA-avid lesions, may provide valuable information for pre-biopsy risk stratification in newly diagnosed prostate cancer.

Wang Y, Jia W, Zhang Z, Bai T, Xu Q, Jiang J, Wang Z

pubmed logopapersSep 26 2025
Insomnia disorder is a prevalent condition associated with significant negative impacts on health and daily functioning. Transcranial direct current stimulation (tDCS) has emerged as a potential technique for improving sleep. However, questions remain regarding its clinical efficacy, and there is a lack of standardized individualized stimulation protocols. This study aims to evaluate the efficacy of model-driven, individualized tDCS for treating insomnia disorder through a randomized, double-blind, sham-controlled trial. A total of 40 patients diagnosed with insomnia disorder will be recruited and randomly assigned to either an active tDCS group or a sham stimulation group. Individualized stimulation parameters will be determined through machine learning-based electric field modeling incorporating structural MRI and EEG data. Participants will undergo 10 sessions of tDCS (5 days/week for 2 consecutive weeks), with follow-up assessments conducted at 2 and 4 weeks after treatment. The primary outcome is the reduction in the Insomnia Severity Index (ISI) score at two weeks post-treatment. Secondary outcomes include changes in sleep parameters, anxiety, and depression scores. This study is expected to provide evidence for the effectiveness of individualized tDCS in improving sleep quality and reducing insomnia symptoms. This integrative approach, combining advanced neuroimaging and electrophysiological biomarkers, has the potential to establish an evidence-based framework for individualized brain stimulation, optimizing therapeutic outcomes. This study is registered at ClinicalTrials.gov (Identifier: NCT06671457) and was registered on 4 November 2024. The online version contains supplementary material available at 10.1186/s12888-025-07347-5.

Fujioka T, Fujita S, Ueda D, Ito R, Kawamura M, Fushimi Y, Tsuboyama T, Yanagawa M, Yamada A, Tatsugami F, Kamagata K, Nozaki T, Matsui Y, Fujima N, Hirata K, Nakaura T, Tateishi U, Naganawa S

pubmed logopapersSep 26 2025
The integration of deep learning (DL) in breast MRI has revolutionized the field of medical imaging, notably enhancing diagnostic accuracy and efficiency. This review discusses the substantial influence of DL technologies across various facets of breast MRI, including image reconstruction, classification, object detection, segmentation, and prediction of clinical outcomes such as response to neoadjuvant chemotherapy and recurrence of breast cancer. Utilizing sophisticated models such as convolutional neural networks, recurrent neural networks, and generative adversarial networks, DL has improved image quality and precision, enabling more accurate differentiation between benign and malignant lesions and providing deeper insights into disease behavior and treatment responses. DL's predictive capabilities for patient-specific outcomes also suggest potential for more personalized treatment strategies. The advancements in DL are pioneering a new era in breast cancer diagnostics, promising more personalized and effective healthcare solutions. Nonetheless, the integration of this technology into clinical practice faces challenges, necessitating further research, validation, and development of legal and ethical frameworks to fully leverage its potential.

Maruyama S, Takeshima H

pubmed logopapersSep 26 2025
To develop a new method to generate synthetic MR spectroscopic imaging (MRSI) data for training machine learning models. This study targeted routine MRI examination protocols with single voxel spectroscopy (SVS). A novel model derived from pix2pix generative adversarial networks was proposed to generate synthetic MRSI data using MRI and SVS data as inputs. T1- and T2-weighted, SVS, and reference MRSI data were acquired from healthy brains with clinically available sequences. The proposed model was trained to generate synthetic MRSI data. Quantitative evaluation involved the calculation of the mean squared error (MSE) against the reference and metabolite ratio value. The effect of the location of and the number of the SVS data on the quality of the synthetic MRSI data was investigated using the MSE. The synthetic MRSI data generated from the proposed model were visually closer to the reference. The 95% confidence interval (CI) of the metabolite ratio value of synthetic MRSI data overlapped with the reference for seven of eight metabolite ratios. The MSEs tended to be lower in the same location than in different locations. The MSEs among groups of numbers of SVS data were not significantly different. A new method was developed to generate MRSI data by integrating MRI and SVS data. Our method can potentially increase the volume of MRSI data training for other machine learning models by adding SVS acquisition to routine MRI examinations.

Nikita Drozdov, Marat Zinovev, Dmitry Sorokin

arxiv logopreprintSep 26 2025
Deformable image registration (DIR) is a cornerstone of medical image analysis, enabling spatial alignment for tasks like comparative studies and multi-modal fusion. While learning-based methods (e.g., CNNs, transformers) offer fast inference, they often require large training datasets and struggle to match the precision of classical iterative approaches on some organ types and imaging modalities. Implicit neural representations (INRs) have emerged as a promising alternative, parameterizing deformations as continuous mappings from coordinates to displacement vectors. However, this comes at the cost of requiring instance-specific optimization, making computational efficiency and seed-dependent learning stability critical factors for these methods. In this work, we propose KAN-IDIR and RandKAN-IDIR, the first integration of Kolmogorov-Arnold Networks (KANs) into deformable image registration with implicit neural representations (INRs). Our proposed randomized basis sampling strategy reduces the required number of basis functions in KAN while maintaining registration quality, thereby significantly lowering computational costs. We evaluated our approach on three diverse datasets (lung CT, brain MRI, cardiac MRI) and compared it with competing instance-specific learning-based approaches, dataset-trained deep learning models, and classical registration approaches. KAN-IDIR and RandKAN-IDIR achieved the highest accuracy among INR-based methods across all evaluated modalities and anatomies, with minimal computational overhead and superior learning stability across multiple random seeds. Additionally, we discovered that our RandKAN-IDIR model with randomized basis sampling slightly outperforms the model with learnable basis function indices, while eliminating its additional training-time complexity.

Kasra Davoodi, Mohammad Hoseyni, Javad Khoramdel, Reza Barati, Reihaneh Mortazavi, Amirhossein Nikoofard, Mahdi Aliyari-Shoorehdeli, Jaber Hatam Parikhan

arxiv logopreprintSep 26 2025
Timely diagnosis of Intracranial hemorrhage (ICH) on Computed Tomography (CT) scans remains a clinical priority, yet the development of robust Artificial Intelligence (AI) solutions is still hindered by fragmented public data. To close this gap, we introduce Hemorica, a publicly available collection of 372 head CT examinations acquired between 2012 and 2024. Each scan has been exhaustively annotated for five ICH subtypes-epidural (EPH), subdural (SDH), subarachnoid (SAH), intraparenchymal (IPH), and intraventricular (IVH)-yielding patient-wise and slice-wise classification labels, subtype-specific bounding boxes, two-dimensional pixel masks and three-dimensional voxel masks. A double-reading workflow, preceded by a pilot consensus phase and supported by neurosurgeon adjudication, maintained low inter-rater variability. Comprehensive statistical analysis confirms the clinical realism of the dataset. To establish reference baselines, standard convolutional and transformer architectures were fine-tuned for binary slice classification and hemorrhage segmentation. With only minimal fine-tuning, lightweight models such as MobileViT-XS achieved an F1 score of 87.8% in binary classification, whereas a U-Net with a DenseNet161 encoder reached a Dice score of 85.5% for binary lesion segmentation that validate both the quality of the annotations and the sufficiency of the sample size. Hemorica therefore offers a unified, fine-grained benchmark that supports multi-task and curriculum learning, facilitates transfer to larger but weakly labelled cohorts, and facilitates the process of designing an AI-based assistant for ICH detection and quantification systems.

Ahta-Shamul Hoque Emran, Hafija Akter, Abdullah Al Shiam, Abu Saleh Musa Miah, Anichur Rahman, Fahmid Al Farid, Hezerul Abdul Karim

arxiv logopreprintSep 26 2025
Brain tumors are abnormal cell growths in the central nervous system (CNS), and their timely detection is critical for improving patient outcomes. This paper proposes an automatic and efficient deep-learning framework for brain tumor detection from magnetic resonance imaging (MRI) scans. The framework employs a pre-trained ResNet50 model for feature extraction, followed by Global Average Pooling (GAP) and linear projection to obtain compact, high-level image representations. These features are then processed by a novel Dense-Dropout sequence, a core contribution of this work, which enhances non-linear feature learning, reduces overfitting, and improves robustness through diverse feature transformations. Another major contribution is the creation of the Mymensingh Medical College Brain Tumor (MMCBT) dataset, designed to address the lack of reliable brain tumor MRI resources. The dataset comprises MRI scans from 209 subjects (ages 9 to 65), including 3671 tumor and 13273 non-tumor images, all clinically verified under expert supervision. To overcome class imbalance, the tumor class was augmented, resulting in a balanced dataset well-suited for deep learning research.

P K Dutta, Anushri Chowdhury, Anouska Bhattacharyya, Shakya Chakraborty, Sujatra Dey

arxiv logopreprintSep 26 2025
Deep learning integration into medical imaging systems has transformed disease detection and diagnosis processes with a focus on pneumonia identification. The study introduces an intricate deep learning system using Convolutional Neural Networks for automated pneumonia detection from chest Xray images which boosts diagnostic precision and speed. The proposed CNN architecture integrates sophisticated methods including separable convolutions along with batch normalization and dropout regularization to enhance feature extraction while reducing overfitting. Through the application of data augmentation techniques and adaptive learning rate strategies the model underwent training on an extensive collection of chest Xray images to enhance its generalization capabilities. A convoluted array of evaluation metrics such as accuracy, precision, recall, and F1 score collectively verify the model exceptional performance by recording an accuracy rate of 91. This study tackles critical clinical implementation obstacles such as data privacy protection, model interpretability, and integration with current healthcare systems beyond just model performance. This approach introduces a critical advancement by integrating medical ontologies with semantic technology to improve diagnostic accuracy. The study enhances AI diagnostic reliability by integrating machine learning outputs with structured medical knowledge frameworks to boost interpretability. The findings demonstrate AI powered healthcare tools as a scalable efficient pneumonia detection solution. This study advances AI integration into clinical settings by developing more precise automated diagnostic methods that deliver consistent medical imaging results.

Jo GD, Jeon KJ, Choi YJ, Lee C, Han SS

pubmed logopapersSep 25 2025
To evaluate the diagnostic interchangeability, image quality, and scan time of deep learning (DL)-reconstructed magnetic resonance imaging (MRI) compared with conventional MRI for the temporomandibular joint (TMJ). Patients with suspected TMJ disorder underwent sagittal proton density-weighted (PDW) and T2-weighted fat-suppressed (T2W FS) MRI using both conventional and DL reconstruction protocols in a single session. Three oral radiologists independently assessed disc shape, disc position, and joint effusion. Diagnostic interchangeability for these findings was evaluated by comparing interobserver agreement, with equivalence defined as a 95% confidence interval (CI) within ±5%. Qualitative image quality (sharpness, noise, artifacts, overall) was rated on a 5-point scale. Quantitative image quality was assessed by measuring the signal-to-noise ratio (SNR) and contrast-to-noise ratio (CNR) in the condyle, disc, and background air. Image quality scores were compared using the Wilcoxon signed-rank test, and SNR/CNR using paired t-tests. Scan times were directly compared. A total of 176 TMJs from 88 patients (mean age, 37 ± 16 years; 43 men) were analyzed. DL-reconstructed MRI demonstrated diagnostic equivalence to conventional MRI for disc shape, position, and effusion (equivalence indices < 3%; 95% CIs within ±5%). DL reconstruction significantly reduced noise in PDW and T2W FS sequences (p < 0.05) while maintaining sharpness and artifact levels. SNR and CNR were significantly improved (p < 0.05), except for disc SNR in PDW (p = 0.189). Scan time was reduced by 49.2%. DL-reconstructed TMJ MRI is diagnostically interchangeable with conventional MRI, offering improved image quality with a shorter scan time. Question Long MRI scan times in patients with temporomandibular disorders can increase pain and motion-related artifacts, often compromising image quality in diagnostic settings. Findings DL reconstruction is diagnostically interchangeable with conventional MRI for assessing disc shape, disc position, and effusion, while improving image quality and reducing scan time. Clinical relevance DL reconstruction enables faster and more tolerable TMJ MRI workflows without compromising diagnostic accuracy, facilitating broader adoption in clinical settings where long scan times and motion artifacts often limit diagnostic efficiency.

Tekin V, Tekinhatun M, Özçelik STA, Fırat H, Üzen H

pubmed logopapersSep 25 2025
Cystic bronchiectasis and pneumonia are respiratory conditions that significantly impact morbidity and mortality worldwide. Diagnosing these diseases accurately is crucial, as early detection can greatly improve patient outcomes. These diseases are respiratory conditions that present with overlapping features on chest X-rays (CXR), making accurate diagnosis challenging. Recent advancements in deep learning (DL) have improved diagnostic accuracy in medical imaging. This study proposes the EffConvNeXt model, a hybrid approach combining EfficientNetB1 and ConvNeXtTiny, designed to enhance classification accuracy for cystic bronchiectasis, pneumonia, and normal cases in CXRs. The model effectively balances EfficientNetB1's efficiency with ConvNeXtTiny's advanced feature extraction, allowing for better identification of complex patterns in CXR images. Additionally, the EffConvNeXt model combines EfficientNetB1 and ConvNeXtTiny, addressing limitations of each model individually: EfficientNetB1's SE blocks improve focus on critical image areas while keeping the model lightweight and fast, and ConvNeXtTiny enhances detection of subtle abnormalities, making the combined model highly effective for rapid and accurate CXR image analysis in clinical settings. For the performance analysis of the EffConvNeXt model, experimental studies were conducted using 5899 CXR images collected from Dicle University Medical Faculty. When used individually, ConvNeXtTiny achieved an accuracy rate of 97.12%, while EfficientNetB1 reached 97.79%. By combining both models, the EffConvNeXt raised the accuracy to 98.25%, showing a 0.46% improvement. With this result, the other tested DL models fell behind. These findings indicate that EffConvNeXt provides a reliable, automated solution for distinguishing cystic bronchiectasis and pneumonia, supporting clinical decision-making with enhanced diagnostic accuracy.
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