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Paukovitsch M, Fechner T, Felbel D, Moerike J, Rottbauer W, Klömpken S, Brunner H, Kloth C, Beer M, Sekuboyina A, Buckert D, Kirschke JS, Sollmann N

pubmed logopapersJul 17 2025
CT-based opportunistic screening using artificial intelligence finds a high prevalence (43%) of osteoporosis in CT scans obtained for planning of transcatheter aortic valve replacement. Thus, opportunistic screening may be a cost-effective way to assess osteoporosis in high-risk populations. Osteoporosis is an underdiagnosed condition associated with fractures and frailty, but may be detected in routine computed tomography (CT) scans. Volumetric bone mineral density (vBMD) was measured in clinical routine thoraco-abdominal CT scans of 207 patients for planning of transcatheter aortic valve replacement (TAVR) using an artificial intelligence (AI)-based algorithm. 43% of patients had osteoporosis (vBMD < 80 mg/cm<sup>3</sup> L1-L3) and were elderly (83.0 {interquartile range [IQR]: 78.0-85.5} vs. 79.0 {IQR: 71.8-84.0} years, p < 0.001), more often female (55.1 vs. 28.8%, p < 0.001), and had a higher Society of Thoracic Surgeon's score for mortality (3.0 {IQR:1.8-4.6} vs. 2.1 {IQR: 1.4-3.2}%, p < 0.001). In addition to lumbar vBMD (58.2 ± 14.7 vs. 106 ± 21.4 mg/cm<sup>3</sup>, p < 0.001), thoracic vBMD (79.5 ± 17.9 vs. 127.4 ± 26.0 mg/cm<sup>3</sup>, p < 0.001) was also significantly reduced in these patients and showed high diagnostic accuracy for osteoporosis assessment (area under curve: 0.96, p < 0.001). Osteoporotic patients were significantly more often at risk for falls (40.4 vs. 22.9%, p = 0.007) and required help in activities of daily life (ADL) more frequently (48.3 vs. 33.1%, p = 0.026), while direct-to-home discharges were fewer (88.8 vs. 96.6%, p = 0.026). In-hospital bleeding complications (3.4 vs. 5.1%), stroke (1.1 vs. 2.5%), and death (1.1 vs. 0.8%) were equally low, while in-hospital device success was equally high (94.4 vs. 94.9%, p > 0.05 for all comparisons). However, one-year probability of survival was significantly lower (84.0 vs. 98.2%, log-rank p < 0.01). Applying an AI-based algorithm to TAVR planning CT scans can reveal a high rate of 43% patients having osteoporosis. Osteoporosis may represent a marker related to frailty and worsened outcome in TAVR patients.

Chen J, Ronchetti M, Stehl V, Nguyen V, Kallaa MA, Gedara MT, Lölkes C, Moser S, Seidl M, Wieczorek M

pubmed logopapersJul 17 2025
Recent developments in the registration of histology and micro-computed tomography (µCT) have broadened the perspective of pathological applications such as virtual histology based on µCT. This topic remains challenging because of the low image quality of soft tissue CT. Additionally, soft tissue samples usually deform during the histology slide preparation, making it difficult to correlate the structures between the histology slide and µCT. In this work, we propose a novel 2D-3D multi-modal deformable image registration method. The method utilizes an initial global 2D-3D registration using an ML-based differentiable similarity measure. The registration is then finalized by an analytical out-of-plane deformation refinement. The method is evaluated on datasets acquired from tonsil and tumor tissues. µCTs of both phase-contrast and conventional absorption modalities are investigated. The registration results from the proposed method are compared with those from intensity- and keypoint-based methods. The comparison is conducted using both visual and fiducial-based evaluations. The proposed method demonstrates superior performance compared to the other two methods.

Liu L, Zang Y, Zheng H, Li S, Song Y, Feng X, Zhang X, Li Y, Cao L, Zhou G, Dong T, Huang Q, Pan T, Deng J, Cheng D

pubmed logopapersJul 17 2025
B-ultrasound results are widely used in early pregnancy loss (EPL) prediction, but there are inevitable intra-observer and inter-observer errors in B-ultrasound results especially in early pregnancy, which lead to inconsistent assessment of embryonic status, and thus affect the judgment of EPL. To address this, we need a rapid and accurate model to predict pregnancy loss in the first trimester. This study aimed to construct an artificial intelligence model to automatically extract biometric parameters from ultrasound videos of early embryos and predict pregnancy loss. This can effectively eliminate the measurement error of B-ultrasound results, accurately predict EPL, and provide decision support for doctors with relatively little clinical experience. A total of 630 ultrasound videos from women with early singleton pregnancies of gestational age between 6 and 10 weeks were used for training. A two-stage artificial intelligence model was established. First, some biometric parameters such as gestational sac areas (GSA), yolk sac diameter (YSD), crown rump length (CRL) and fetal heart rate (FHR), were extract from ultrasound videos by a deep neural network named A3F-net, which is a modified neural network based on U-Net designed by ourselves. Then an ensemble learning model predicted pregnancy loss risk based on these features. Dice, IOU and Precision were used to evaluate the measurement results, and sensitivity, AUC etc. were used to evaluate the predict results. The fetal heart rate was compared with those measured by doctors, and the accuracy of results was compared with other AI models. In the biometric features measurement stage, the precision of GSA, YSD and CRL of A3F-net were 98.64%, 96.94% and 92.83%, it was the highest compared to other 2 models. Bland-Altman analysis did not show systematic deviations between doctors and AI. The mean and standard deviation of the mean relative error between doctors and the AI model was 0.060 ± 0.057. In the EPL prediction stage, the ensemble learning models demonstrated excellent performance, with CatBoost being the best-performing model, achieving a precision of 98.0% and an AUC of 0.969 (95% CI: 0.962-0.975). In this study, a hybrid AI model to predict EPL was established. First, a deep neural network automatically measured the biometric parameters from ultrasound video to ensure the consistency and accuracy of the measurements, then a machine learning model predicted EPL risk to support doctors making decisions. The use of our established AI model in EPL prediction has the potential to assist physicians in making more accurate and timely clinical decision in clinical application.

Serino DA, Bell E, Klasky M, Southworth BS, Nadiga B, Wilcox T, Korobkin O

pubmed logopapersJul 17 2025
In high energy density physics (HEDP) and inertial confinement fusion (ICF), predictive modeling is complicated by uncertainty in parameters that characterize various aspects of the modeled system, such as those characterizing material properties, equation of state (EOS), opacities, and initial conditions. Typically, however, these parameters are not directly observable. What is observed instead is a time sequence of radiographic projections using X-rays. In this work, we define a set of sparse hydrodynamic features derived from the outgoing shock profile and outer material edge, which can be obtained from radiographic measurements, to directly infer such parameters. Our machine learning (ML)-based methodology involves a pipeline of two architectures, a radiograph-to-features network (R2FNet) and a features-to-parameters network (F2PNet), that are trained independently and later combined to approximate a posterior distribution for the parameters from radiographs. We show that the machine learning architectures are able to accurately infer initial conditions and EOS parameters, and that the estimated parameters can be used in a hydrodynamics code to obtain density fields, shocks, and material interfaces that satisfy thermodynamic and hydrodynamic consistency. Finally, we demonstrate that features resulting from an unknown EOS model can be successfully mapped onto parameters of a chosen analytical EOS model, implying that network predictions are learning physics, with a degree of invariance to the underlying choice of EOS model. To the best of our knowledge, our framework is the first demonstration of recovering both thermodynamic and hydrodynamic consistent density fields from noisy radiographs.

Zhu L, Li J, Wang X, He Y, Li S, He S, Deng B

pubmed logopapersJul 17 2025
This study aims to explore the role of intra- and peri-tumoral radiomics features in tumor risk prediction, with a particular focus on the impact of peri-tumoral characteristics on the tumor microenvironment. A total of 133 patients, including 128 with thymomas and 5 with thymic carcinomas, were ultimately enrolled in this study. Based on the high- and low-risk classification, the cohort was divided into a training set (n = 93) and a testing set (n = 40) for subsequent analysis.Based on imaging data from these 133 patients, multiple radiomics prediction models integrating intra-tumoral and peritumoral features were developed. The data were sourced from patients treated at the Affiliated Hospital of Guangdong Medical University between 2015 and 2023, with all imaging obtained through preoperative CT scans. Radiomics feature extraction involved three primary categories: first-order features, shape features, and high-order features. Initially, the tumor's region of interest (ROI) was manually delineated using ITK-SNAP software. A custom Python algorithm was then used to automatically expand the peri-tumoral area, extracting features within 1 mm, 2 mm, and 3 mm zones surrounding the tumor. Additionally, considering the multimodal nature of the imaging data, image fusion techniques were incorporated to further enhance the model's ability to capture the tumor microenvironment. To build the radiomics models, selected features were first standardized using z-scores. Initial feature selection was performed using a t-test (p < 0.05), followed by Spearman correlation analysis to remove redundancy by retaining only one feature from each pair with a correlation coefficient ≥ 0.90. Subsequently, hierarchical clustering and the LASSO algorithm were applied to identify the most predictive features. These selected features were then used to train machine learning models, which were optimized on the training dataset and assessed for predictive performance. To further evaluate the effectiveness of these models, various statistical methods were applied, including DeLong's test, NRI, and IDI, to compare predictive differences among models. Decision curve analysis (DCA) was also conducted to assess the clinical applicability of the models. The results indicate that the IntraPeri1mm model performed the best, achieving an AUC of 0.837, with sensitivity and specificity at 0.846 and 0.84, respectively, significantly outperforming other models. SHAP value analysis identified several key features, such as peri_log_sigma_2_0_mm 3D_firstorder RootMeanSquared and intra_wavelet_LLL_firstorder Skewness, which made substantial contributions to the model's predictive accuracy. NRI and IDI analyses further confirmed the model's superior clinical applicability, and the DCA curve demonstrated robust performance across different thresholds. DeLong's test highlighted the statistical significance of the IntraPeri1mm model, underscoring its potential utility in radiomics research. Overall, this study provides a new perspective on tumor risk assessment, highlighting the importance of peri-tumoral features in the analysis of the tumor microenvironment. It aims to offer valuable insights for the development of personalized treatment plans. Not applicable.

Shi L, Shi L, Cui Z, Lin C, Zhang R, Zhang J, Zhu Y, Shi W, Wang J, Wang Y, Wang D, Liu H, Gao X

pubmed logopapersJul 17 2025
Attention-deficit/hyperactivity disorder (ADHD) is a common neurodevelopmental disorder that affects behavior, attention, and learning. Current diagnoses rely heavily on subjective assessments, underscoring the need for objective imaging-based methods. This study aims to explore whether structural connectivity networks derived from MRI can reveal alterations associated with ADHD and support data-driven understanding. We collected brain MRI data from 947 individuals (aged 7-26 years; 590 males, 356 females, 1 unspecified) across eight centers, sourced from the Neuro Bureau ADHD-200 preprocessed dataset. Transformer-based deep learning models were used to learn relationships between different brain regions and construct structural connectivity networks. To prepare input for the model, each region was transformed into a standardized data sequence using four different strategies. The strength of connectivity between brain regions was then measured to identify structural differences related to ADHD. Five-fold cross-validation and statistical analyses were used to evaluate model robustness and group differences, respectively. Here we show that the proposed method performs well in distinguishing ADHD individuals from healthy controls, with accuracy reaching 71.9 percent and an area under curve of 0.74. The structural networks also reveal significant differences in connectivity patterns (paired t-test: P = 0.81 × 10<sup>-6</sup>), particularly involving regions responsible for motor and executive function. Notably, the importance rankings of several brain regions, including the thalamus and caudate, differ markedly between groups. This study shows that ADHD may be associated with connectivity alterations in multiple brain regions. Our findings suggest that brain structural connectivity networks built using Transformer-based methods offer a promising tool for both diagnosis and further research into brain structure.

Tivnan M, Kikkert ID, Wu D, Yang K, Wolterink JM, Li Q, Gupta R

pubmed logopapersJul 17 2025
Sparse-view computed tomography (CT) holds promise for reducing radiation exposure and enabling novel system designs. Traditional reconstruction algorithms, including Filtered Backprojection (FBP) and Model-Based Iterative Reconstruction (MBIR), often produce artifacts in sparse-view data. Deep Learning Reconstruction (DLR) offers potential improvements, but task-based evaluations of DLR in sparse-view CT remain limited. This study employs an Artificial Intelligence (AI) observer to evaluate the diagnostic accuracy of FBP, MBIR, and DLR for intracranial hemorrhage detection and classification, offering a cost-effective alternative to human radiologist studies. A public brain CT dataset with labeled intracranial hemorrhages was used to train an AI observer model. Sparse-view CT data were simulated, with reconstructions performed using FBP, MBIR, and DLR. Reconstruction quality was assessed using metrics such as Peak Signal-to-Noise Ratio (PSNR), Structural Similarity Index Measure (SSIM), and Learned Perceptual Image Patch Similarity (LPIPS). Diagnostic utility was evaluated using Receiver Operating Characteristic (ROC) analysis and Area Under the Curve (AUC) values for One-vs-Rest and One-vs-One classification tasks. DLR outperformed FBP and MBIR in all quality metrics, demonstrating reduced noise, improved structural similarity, and fewer artifacts. The AI observer achieved the highest classification accuracy with DLR, while FBP surpassed MBIR in task-based accuracy despite inferior image quality metrics, emphasizing the value of task-based evaluations. DLR provides an effective balance of artifact reduction and anatomical detail in sparse-view CT brain imaging. This proof-of-concept study highlights AI observer models as a viable, cost-effective alternative for evaluating CT reconstruction techniques.

Thomas B, Ali MA, Ali FMH, Chung A, Joshi M, Maiguma-Wilson S, Reiff G, Said H, Zalmay P, Berks M, Blackledge MD, O'Connor JPB

pubmed logopapersJul 17 2025
Fat and muscle mass are potential biomarkers of wellbeing and disease in oncology, but clinical measurement methods vary considerably. Here we evaluate the accuracy, precision and ability to track change for multiple deep learning (DL) models that quantify fat and muscle mass from abdominal MRI. Specifically, subcutaneous fat (SF), intra-abdominal fat (VF), external muscle (EM) and psoas muscle (PM) were evaluated using 15 convolutional neural network (CNN)-based and 4 transformer-based deep learning model architectures. There was negligible difference in the accuracy of human observers and all deep learning models in delineating SF or EM. Both of these tissues had excellent repeatability of their delineation. VF was measured most accurately by the human observers, then by CNN-based models, which outperformed transformer-based models. In distinction, PM delineation accuracy and repeatability was poor for all assessments. Repeatability limits of agreement determined when changes measured in individual patients were due to real change rather than test-retest variation. In summary, DL model accuracy and precision of delineating fat and muscle volumes varies between CNN-based and transformer-based models, between different tissues and in some cases with gender. These factors should be considered when investigators deploy deep learning methods to estimate biomarkers of fat and muscle mass.

Maloof T, Karaisz F, Abdelbaki A, Perumal KD, Krishna SG

pubmed logopapersJul 17 2025
Accurate diagnosis of pancreatic cystic lesions (PCLs) is essential to guide appropriate management and reduce unnecessary surgeries. Despite multiple guidelines in PCL management, a substantial proportion of patients still undergo major resections for benign cysts, and a majority of resected intraductal papillary mucinous neoplasms (IPMNs) show only low-grade dysplasia, leading to significant clinical, financial, and psychological burdens. This review highlights emerging endoscopic approaches that enhance diagnostic accuracy and support organ-sparing, minimally invasive management of PCLs. Recent studies suggest that endoscopic ultrasound (EUS) and its accessory techniques, such as contrast-enhanced EUS and needle-based confocal laser endomicroscopy, as well as next-generation sequencing analysis of cyst fluid, not only accurately characterize PCLs but are also well tolerated and cost-effective. Additionally, emerging therapeutics such as EUS-guided radiofrequency ablation (RFA) and EUS-chemoablation are promising as minimally invasive treatments for high-risk mucinous PCLs in patients who are not candidates for surgery. Accurate diagnosis of PCLs remains challenging, leading to many patients undergoing unnecessary surgery. Emerging endoscopic imaging biomarkers, artificial intelligence analysis, and molecular biomarkers enhance diagnostic precision. Additionally, novel endoscopic ablative therapies offer safe, minimally invasive, organ-sparing treatment options, thereby reducing the healthcare resource burdens associated with overtreatment.

Zhang S, Lin Y, Han D, Pan Y, Geng T, Ge H, Zhao J

pubmed logopapersJul 17 2025
Heart failure with preserved ejection fraction (HFpEF) poses significant diagnostic and prognostic challenges due to its clinical heterogeneity. This study proposes a multi-modal, explainable machine learning framework that integrates clinical variables and cardiac magnetic resonance (CMR)-derived features, particularly epicardial adipose tissue (EAT) volume, to improve risk stratification and outcome prediction in patients with HFpEF. A retrospective cohort of 301 participants (171 in the HFpEF group and 130 in the control group) was analyzed. Baseline characteristics, CMR-derived EAT volume, and laboratory biomarkers were integrated into machine learning models. Model performance was evaluated using accuracy, precision, recall, and F1-score. Additionally, receiver operating characteristic area under the curve (ROC-AUC) and precision-recall area under the curve (PR-AUC) were employed to assess discriminative power across varying decision thresholds. Hyperparameter optimization and ensemble techniques were applied to enhance predictive performance. HFpEF patients exhibited significantly higher EAT volume (70.9±27.3 vs. 41.9±18.3 mL, p<0.001) and NT-proBNP levels (1574 [963,2722] vs. 33 [10,100] pg/mL, p<0.001), along with a greater prevalence of comorbidities. The voting classifier demonstrated the highest accuracy for HFpEF diagnosis (0.94), with a precision of 0.96, recall of 0.94, and an F1-score of 0.95. For prognostic tasks, AdaBoost, XGBoost and Random Forest yielded superior performance in predicting adverse clinical outcomes, including rehospitalization and all-cause mortality (accuracy: 0.95). Key predictive features identified included EAT volume, right atrioventricular groove (Right AVG), tricuspid regurgitation velocity (TRV), and metabolic syndrome. Explainable models combining clinical and CMR-derived features, especially EAT volume, improve support for HFpEF diagnosis and outcome prediction. These findings highlight the value of a data-driven, interpretable approach to characterizing HFpEF phenotypes and may facilitate individualized risk assessment in selected populations.
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