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Automated Detection of Black Hole Sign for Intracerebral Hemorrhage Patients Using Self-Supervised Learning.

Wang H, Schwirtlich T, Houskamp EJ, Hutch MR, Murphy JX, do Nascimento JS, Zini A, Brancaleoni L, Giacomozzi S, Luo Y, Naidech AM

pubmed logopapersMay 7 2025
Intracerebral Hemorrhage (ICH) is a devastating form of stroke. Hematoma expansion (HE), growth of the hematoma on interval scans, predicts death and disability. Accurate prediction of HE is crucial for targeted interventions to improve patient outcomes. The black hole sign (BHS) on non-contrast computed tomography (CT) scans is a predictive marker for HE. An automated method to recognize the BHS and predict HE could speed precise patient selection for treatment. In. this paper, we presented a novel framework leveraging self-supervised learning (SSL) techniques for BHS identification on head CT images. A ResNet-50 encoder model was pre-trained on over 1.7 million unlabeled head CT images. Layers for binary classification were added on top of the pre-trained model. The resulting model was fine-tuned using the training data and evaluated on the held-out test set to collect AUC and F1 scores. The evaluations were performed on scan and slice levels. We ran different panels, one using two multi-center datasets for external validation and one including parts of them in the pre-training RESULTS: Our model demonstrated strong performance in identifying BHS when compared with the baseline model. Specifically, the model achieved scan-level AUC scores between 0.75-0.89 and F1 scores between 0.60-0.70. Furthermore, it exhibited robustness and generalizability across an external dataset, achieving a scan-level AUC score of up to 0.85 and an F1 score of up to 0.60, while it performed less well on another dataset with more heterogeneous samples. The negative effects could be mitigated after including parts of the external datasets in the fine-tuning process. This study introduced a novel framework integrating SSL into medical image classification, particularly on BHS identification from head CT scans. The resulting pre-trained head CT encoder model showed potential to minimize manual annotation, which would significantly reduce labor, time, and costs. After fine-tuning, the framework demonstrated promising performance for a specific downstream task, identifying the BHS to predict HE, upon comprehensive evaluation on diverse datasets. This approach holds promise for enhancing medical image analysis, particularly in scenarios with limited data availability. ICH = Intracerebral Hemorrhage; HE = Hematoma Expansion; BHS = Black Hole Sign; CT = Computed Tomography; SSL = Self-supervised Learning; AUC = Area Under the receiver operator Curve; CNN = Convolutional Neural Network; SimCLR = Simple framework for Contrastive Learning of visual Representation; HU = Hounsfield Unit; CLAIM = Checklist for Artificial Intelligence in Medical Imaging; VNA = Vendor Neutral Archive; DICOM = Digital Imaging and Communications in Medicine; NIfTI = Neuroimaging Informatics Technology Initiative; INR = International Normalized Ratio; GPU= Graphics Processing Unit; NIH= National Institutes of Health.

Prompt Engineering for Large Language Models in Interventional Radiology.

Dietrich N, Bradbury NC, Loh C

pubmed logopapersMay 7 2025
Prompt engineering plays a crucial role in optimizing artificial intelligence (AI) and large language model (LLM) outputs by refining input structure, a key factor in medical applications where precision and reliability are paramount. This Clinical Perspective provides an overview of prompt engineering techniques and their relevance to interventional radiology (IR). It explores key strategies, including zero-shot, one- or few-shot, chain-of-thought, tree-of-thought, self-consistency, and directional stimulus prompting, demonstrating their application in IR-specific contexts. Practical examples illustrate how these techniques can be effectively structured for workplace and clinical use. Additionally, the article discusses best practices for designing effective prompts and addresses challenges in the clinical use of generative AI, including data privacy and regulatory concerns. It concludes with an outlook on the future of generative AI in IR, highlighting advances including retrieval-augmented generation, domain-specific LLMs, and multimodal models.

Multistage Diffusion Model With Phase Error Correction for Fast PET Imaging.

Gao Y, Huang Z, Xie X, Zhao W, Yang Q, Yang X, Yang Y, Zheng H, Liang D, Liu J, Chen R, Hu Z

pubmed logopapersMay 7 2025
Fast PET imaging is clinically important for reducing motion artifacts and improving patient comfort. While recent diffusion-based deep learning methods have shown promise, they often fail to capture the true PET degradation process, suffer from accumulated inference errors, introduce artifacts, and require extensive reconstruction iterations. To address these challenges, we propose a novel multistage diffusion framework tailored for fast PET imaging. At the coarse level, we design a multistage structure to approximate the temporal non-linear PET degradation process in a data-driven manner, using paired PET images collected under different acquisition duration. A Phase Error Correction Network (PECNet) ensures consistency across stages by correcting accumulated deviations. At the fine level, we introduce a deterministic cold diffusion mechanism, which simulates intra-stage degradation through interpolation between known acquisition durations-significantly reducing reconstruction iterations to as few as 10. Evaluations on [<sup>68</sup>Ga]FAPI and [<sup>18</sup>F]FDG PET datasets demonstrate the superiority of our approach, achieving peak PSNRs of 36.2 dB and 39.0 dB, respectively, with average SSIMs over 0.97. Our framework offers high-fidelity PET imaging with fewer iterations, making it practical for accelerated clinical imaging.

The added value of artificial intelligence using Quantib Prostate for the detection of prostate cancer at multiparametric magnetic resonance imaging.

Russo T, Quarta L, Pellegrino F, Cosenza M, Camisassa E, Lavalle S, Apostolo G, Zaurito P, Scuderi S, Barletta F, Marzorati C, Stabile A, Montorsi F, De Cobelli F, Brembilla G, Gandaglia G, Briganti A

pubmed logopapersMay 7 2025
Artificial intelligence (AI) has been proposed to assist radiologists in reporting multiparametric magnetic resonance imaging (mpMRI) of the prostate. We evaluate the diagnostic performance of radiologists with different levels of experience when reporting mpMRI with the support of available AI-based software (Quantib Prostate). This is a single-center study (NCT06298305) involving 110 patients. Those with a positive mpMRI (PI-RADS ≥ 3) underwent targeted plus systematic biopsy (TBx plus SBx), while those with a negative mpMRI but a high clinical suspicion of prostate cancer (PCa) underwent SBx. Three readers with different levels of experience, identified as R1, R2, and R3 reviewed all mpMRI. Inter-reader agreement among the three readers with or without the assistance of Quantib Prostate as well as sensitivity, specificity, positive predictive value (PPV), negative predictive value (NPV), and diagnostic accuracy for the detection of clinically significant PCa (csPCa) were assessed. 102 patients underwent prostate biopsy and the csPCa detection rate was 47%. Using Quantib Prostate resulted in an increased number of lesions identified for R3 (101 vs. 127). Inter-reader agreement slightly increased when using Quantib Prostate from 0.37 to 0.41 without vs. with Quantib Prostate, respectively. PPV, NPV and diagnostic accuracy (measured by the area under the curve [AUC]) of R3 improved (0.51 vs. 0.55, 0.65 vs.0.82 and 0.56 vs. 0.62, respectively). Conversely, no changes were observed for R1 and R2. Using Quantib Prostate did not enhance the detection rate of csPCa for readers with some experience in prostate imaging. However, for an inexperienced reader, this AI-based software is demonstrated to improve the performance. Name of registry: clinicaltrials.gov. NCT06298305. Date of registration: 2022-09.

ChatOCT: Embedded Clinical Decision Support Systems for Optical Coherence Tomography in Offline and Resource-Limited Settings.

Liu C, Zhang H, Zheng Z, Liu W, Gu C, Lan Q, Zhang W, Yang J

pubmed logopapersMay 7 2025
Optical Coherence Tomography (OCT) is a critical imaging modality for diagnosing ocular and systemic conditions, yet its accessibility is hindered by the need for specialized expertise and high computational demands. To address these challenges, we introduce ChatOCT, an offline-capable, domain-adaptive clinical decision support system (CDSS) that integrates structured expert Q&A generation, OCT-specific knowledge injection, and activation-aware model compression. Unlike existing systems, ChatOCT functions without internet access, making it suitable for low-resource environments. ChatOCT is built upon LLaMA-2-7B, incorporating domain-specific knowledge from PubMed and OCT News through a two-stage training process: (1) knowledge injection for OCT-specific expertise and (2) Q&A instruction tuning for structured, interactive diagnostic reasoning. To ensure feasibility in offline environments, we apply activation-aware weight quantization, reducing GPU memory usage to ~ 4.74 GB, enabling deployment on standard OCT hardware. A novel expert answer generation framework mitigates hallucinations by structuring responses in a multi-step process, ensuring accuracy and interpretability. ChatOCT outperforms state-of-the-art baselines such as LLaMA-2, PMC-LLaMA-13B, and ChatDoctor by 10-15 points in coherence, relevance, and clinical utility, while reducing GPU memory requirements by 79%, while maintaining real-time responsiveness (~ 20 ms inference time). Expert ophthalmologists rated ChatOCT's outputs as clinically actionable and aligned with real-world decision-making needs, confirming its potential to assist frontline healthcare providers. ChatOCT represents an innovative offline clinical decision support system for optical coherence tomography (OCT) that runs entirely on local embedded hardware, enabling real-time analysis in resource-limited settings without internet connectivity. By offering a scalable, generalizable pipeline that integrates knowledge injection, instruction tuning, and model compression, ChatOCT provides a blueprint for next-generation, resource-efficient clinical AI solutions across multiple medical domains.

Accelerated inference for thyroid nodule recognition in ultrasound imaging using FPGA.

Ma W, Wu X, Zhang Q, Li X, Wu X, Wang J

pubmed logopapersMay 7 2025
Thyroid cancer is the most prevalent malignant tumour in the endocrine system, with its incidence steadily rising in recent years. Current central processing units (CPUs) and graphics processing units (GPUs) face significant challenges in terms of processing speed, energy consumption, cost, and scalability in the identification of thyroid nodules, making them inadequate for the demands of future green, efficient, and accessible healthcare. To overcome these limitations, this study proposes an efficient quantized inference method using a field-programmable gate array (FPGA). We employ the YOLOv4-tiny neural network model, enhancing software performance with the K-means + + optimization algorithm and improving hardware performance through techniques such as 8-bit weight quantization, batch normalization, and convolutional layer fusion. The study is based on the ZYNQ7020 FPGA platform. Experimental results demonstrate an average accuracy of 81.44% on the Tn3k dataset and 81.20% on the internal test set from a Chinese tertiary hospital. The power consumption of the FPGA platform, CPU (Intel Core i5-10200 H), and GPU (NVIDIA RTX 4090) were 3.119 watts, 45 watts, and 68 watts, respectively, with energy efficiency ratios of 5.45, 0.31, and 5.56. This indicates that the FPGA's energy efficiency is 17.6 times that of the CPU and 0.98 times that of the GPU. These results show that the FPGA not only significantly outperforms the CPU in speed but also consumes far less power than the GPU. Moreover, using mid-to-low-end FPGAs yields performance comparable to that of commercial-grade GPUs. This technology presents a novel solution for medical imaging diagnostics, with the potential to significantly enhance the speed, accuracy, and environmental sustainability of ultrasound image analysis, thereby supporting the future development of medical care.

Alterations in static and dynamic functional network connectivity in chronic low back pain: a resting-state network functional connectivity and machine learning study.

Liu H, Wan X

pubmed logopapersMay 7 2025
Low back pain (LBP) is a prevalent pain condition whose persistence can lead to changes in the brain regions responsible for sensory, cognitive, attentional, and emotional processing. Previous neuroimaging studies have identified various structural and functional abnormalities in patients with LBP; however, how the static and dynamic large-scale functional network connectivity (FNC) of the brain is affected in these patients remains unclear. Forty-one patients with chronic low back pain (cLBP) and 42 healthy controls underwent resting-state functional MRI scanning. The independent component analysis method was employed to extract the resting-state networks. Subsequently, we calculate and compare between groups for static intra- and inter-network functional connectivity. In addition, we investigated the differences between dynamic functional network connectivity and dynamic temporal metrics between cLBP patients and healthy controls. Finally, we tried to distinguish cLBP patients from healthy controls by support vector machine method. The results showed that significant reductions in functional connectivity within the network were found within the DMN,DAN, and ECN in cLBP patients. Significant between-group differences were also found in static FNC and in each state of dynamic FNC. In addition, in terms of dynamic temporal metrics, fraction time and mean dwell time were significantly altered in cLBP patients. In conclusion, our study suggests the existence of static and dynamic large-scale brain network alterations in patients with cLBP. The findings provide insights into the neural mechanisms underlying various brain function abnormalities and altered pain experiences in patients with cLBP.

False Promises in Medical Imaging AI? Assessing Validity of Outperformance Claims

Evangelia Christodoulou, Annika Reinke, Pascaline Andrè, Patrick Godau, Piotr Kalinowski, Rola Houhou, Selen Erkan, Carole H. Sudre, Ninon Burgos, Sofiène Boutaj, Sophie Loizillon, Maëlys Solal, Veronika Cheplygina, Charles Heitz, Michal Kozubek, Michela Antonelli, Nicola Rieke, Antoine Gilson, Leon D. Mayer, Minu D. Tizabi, M. Jorge Cardoso, Amber Simpson, Annette Kopp-Schneider, Gaël Varoquaux, Olivier Colliot, Lena Maier-Hein

arxiv logopreprintMay 7 2025
Performance comparisons are fundamental in medical imaging Artificial Intelligence (AI) research, often driving claims of superiority based on relative improvements in common performance metrics. However, such claims frequently rely solely on empirical mean performance. In this paper, we investigate whether newly proposed methods genuinely outperform the state of the art by analyzing a representative cohort of medical imaging papers. We quantify the probability of false claims based on a Bayesian approach that leverages reported results alongside empirically estimated model congruence to estimate whether the relative ranking of methods is likely to have occurred by chance. According to our results, the majority (>80%) of papers claims outperformance when introducing a new method. Our analysis further revealed a high probability (>5%) of false outperformance claims in 86% of classification papers and 53% of segmentation papers. These findings highlight a critical flaw in current benchmarking practices: claims of outperformance in medical imaging AI are frequently unsubstantiated, posing a risk of misdirecting future research efforts.

Convergent Complex Quasi-Newton Proximal Methods for Gradient-Driven Denoisers in Compressed Sensing MRI Reconstruction

Tao Hong, Zhaoyi Xu, Se Young Chun, Luis Hernandez-Garcia, Jeffrey A. Fessler

arxiv logopreprintMay 7 2025
In compressed sensing (CS) MRI, model-based methods are pivotal to achieving accurate reconstruction. One of the main challenges in model-based methods is finding an effective prior to describe the statistical distribution of the target image. Plug-and-Play (PnP) and REgularization by Denoising (RED) are two general frameworks that use denoisers as the prior. While PnP/RED methods with convolutional neural networks (CNNs) based denoisers outperform classical hand-crafted priors in CS MRI, their convergence theory relies on assumptions that do not hold for practical CNNs. The recently developed gradient-driven denoisers offer a framework that bridges the gap between practical performance and theoretical guarantees. However, the numerical solvers for the associated minimization problem remain slow for CS MRI reconstruction. This paper proposes a complex quasi-Newton proximal method that achieves faster convergence than existing approaches. To address the complex domain in CS MRI, we propose a modified Hessian estimation method that guarantees Hermitian positive definiteness. Furthermore, we provide a rigorous convergence analysis of the proposed method for nonconvex settings. Numerical experiments on both Cartesian and non-Cartesian sampling trajectories demonstrate the effectiveness and efficiency of our approach.

An imageless magnetic resonance framework for fast and cost-effective decision-making

Alba González-Cebrián, Pablo García-Cristóbal, Fernando Galve, Efe Ilıcak, Viktor Van Der Valk, Marius Staring, Andrew Webb, Joseba Alonso

arxiv logopreprintMay 7 2025
Magnetic Resonance Imaging (MRI) is the gold standard in countless diagnostic procedures, yet hardware complexity, long scans, and cost preclude rapid screening and point-of-care use. We introduce Imageless Magnetic Resonance Diagnosis (IMRD), a framework that bypasses k-space sampling and image reconstruction by analyzing raw one-dimensional MR signals. We identify potentially impactful embodiments where IMRD requires only optimized pulse sequences for time-domain contrast, minimal low-field hardware, and pattern recognition algorithms to answer clinical closed queries and quantify lesion burden. As a proof of concept, we simulate multiple sclerosis lesions in silico within brain phantoms and deploy two extremely fast protocols (approximately 3 s), with and without spatial information. A 1D convolutional neural network achieves AUC close to 0.95 for lesion detection and R2 close to 0.99 for volume estimation. We also perform robustness tests under reduced signal-to-noise ratio, partial signal omission, and relaxation-time variability. By reframing MR signals as direct diagnostic metrics, IMRD paves the way for fast, low-cost MR screening and monitoring in resource-limited environments.
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