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ESR Essentials: a step-by-step guide of segmentation for radiologists-practice recommendations by the European Society of Medical Imaging Informatics.

Chupetlovska K, Akinci D'Antonoli T, Bodalal Z, Abdelatty MA, Erenstein H, Santinha J, Huisman M, Visser JJ, Trebeschi S, Groot Lipman KBW

pubmed logopapersMay 22 2025
High-quality segmentation is important for AI-driven radiological research and clinical practice, with the potential to play an even more prominent role in the future. As medical imaging advances, accurately segmenting anatomical and pathological structures is increasingly used to obtain quantitative data and valuable insights. Segmentation and volumetric analysis could enable more precise diagnosis, treatment planning, and patient monitoring. These guidelines aim to improve segmentation accuracy and consistency, allowing for better decision-making in both research and clinical environments. Practical advice on planning and organization is provided, focusing on quality, precision, and communication among clinical teams. Additionally, tips and strategies for improving segmentation practices in radiology and radiation oncology are discussed, as are potential pitfalls to avoid. KEY POINTS: As AI continues to advance, volumetry will become more integrated into clinical practice, making it essential for radiologists to stay informed about its applications in diagnosis and treatment planning. There is a significant lack of practical guidelines and resources tailored specifically for radiologists on technical topics like segmentation and volumetric analysis. Establishing clear rules and best practices for segmentation can streamline volumetric assessment in clinical settings, making it easier to manage and leading to more accurate decision-making for patient care.

An X-ray bone age assessment method for hands and wrists of adolescents in Western China based on feature fusion deep learning models.

Wang YH, Zhou HM, Wan L, Guo YC, Li YZ, Liu TA, Guo JX, Li DY, Chen T

pubmed logopapersMay 22 2025
The epiphyses of the hand and wrist serve as crucial indicators for assessing skeletal maturity in adolescents. This study aimed to develop a deep learning (DL) model for bone age (BA) assessment using hand and wrist X-ray images, addressing the challenge of classifying BA in adolescents. The results of this DL-based classification were then compared and analyzed with those obtained from manual assessment. A retrospective analysis was conducted on 688 hand and wrist X-ray images of adolescents aged 11.00-23.99 years from western China, which were randomly divided into training set, validation set and test set. The BA assessment results were initially analyzed and compared using four DL network models: InceptionV3, InceptionV3 + SE + Sex, InceptionV3 + Bilinear and InceptionV3 + Bilinear. + SE + Sex, to identify the DL model with the best classification performance. Subsequently, the results of the top-performing model were compared with those of manual classification. The study findings revealed that the InceptionV3 + Bilinear + SE + Sex model exhibited the best performance, achieving classification accuracies of 96.15% and 90.48% for the training and test set, respectively. Furthermore, based on the InceptionV3 + Bilinear + SE + Sex model, classification accuracies were calculated for four age groups (< 14.0 years, 14.0 years ≤ age < 16.0 years, 16.0 years ≤ age < 18.0 years, ≥ 18.0 years), with notable accuracies of 100% for the age groups 16.0 years ≤ age < 18.0 years and ≥ 18.0 years. The BA classification, utilizing the feature fusion DL network model, holds significant reference value for determining the age of criminal responsibility of adolescents, particularly at the critical legal age boundaries of 14.0, 16.0, and 18.0 years.

Multimodal MRI radiomics enhances epilepsy prediction in pediatric low-grade glioma patients.

Tang T, Wu Y, Dong X, Zhai X

pubmed logopapersMay 22 2025
Determining whether pediatric patients with low-grade gliomas (pLGGs) have tumor-related epilepsy (GAE) is a crucial aspect of preoperative evaluation. Therefore, we aim to propose an innovative, machine learning- and deep learning-based framework for the rapid and non-invasive preoperative assessment of GAE in pediatric patients using magnetic resonance imaging (MRI). In this study, we propose a novel radiomics-based approach that integrates tumor and peritumoral features extracted from preoperative multiparametric MRI scans to accurately and non-invasively predict the occurrence of tumor-related epilepsy in pediatric patients. Our study developed a multimodal MRI radiomics model to predict epilepsy in pLGGs patients, achieving an AUC of 0.969. The integration of multi-sequence MRI data significantly improved predictive performance, with Stochastic Gradient Descent (SGD) classifier showing robust results (sensitivity: 0.882, specificity: 0.956). Our model can accurately predict whether pLGGs patients have tumor-related epilepsy, which could guide surgical decision-making. Future studies should focus on similarly standardized preoperative evaluations in pediatric epilepsy centers to increase training data and enhance the generalizability of the model.

DP-MDM: detail-preserving MR reconstruction via multiple diffusion models.

Geng M, Zhu J, Hong R, Liu Q, Liang D, Liu Q

pubmed logopapersMay 22 2025
<i>Objective.</i>Magnetic resonance imaging (MRI) is critical in medical diagnosis and treatment by capturing detailed features, such as subtle tissue changes, which help clinicians make precise diagnoses. However, the widely used single diffusion model has limitations in accurately capturing more complex details. This study aims to address these limitations by proposing an efficient method to enhance the reconstruction of detailed features in MRI.<i>Approach.</i>We present a detail-preserving reconstruction method that leverages multiple diffusion models (DP-MDM) to extract structural and detailed features in the k-space domain, which complements the image domain. Since high-frequency information in k-space is more systematically distributed around the periphery compared to the irregular distribution of detailed features in the image domain, this systematic distribution allows for more efficient extraction of detailed features. To further reduce redundancy and enhance model performance, we introduce virtual binary masks with adjustable circular center windows that selectively focus on high-frequency regions. These masks align with the frequency distribution of k-space data, enabling the model to focus more efficiently on high-frequency information. The proposed method employs a cascaded architecture, where the first diffusion model recovers low-frequency structural components, with subsequent models enhancing high-frequency details during the iterative reconstruction stage.<i>Main results.</i>Experimental results demonstrate that DP-MDM achieves superior performance across multiple datasets. On the<i>T1-GE brain</i>dataset with 2D random sampling at<i>R</i>= 15, DP-MDM achieved 35.14 dB peak signal-to-noise ratio (PSNR) and 0.8891 structural similarity (SSIM), outperforming other methods. The proposed method also showed robust performance on the<i>Fast-MRI</i>and<i>Cardiac MR</i>datasets, achieving the highest PSNR and SSIM values.<i>Significance.</i>DP-MDM significantly advances MRI reconstruction by balancing structural integrity and detail preservation. It not only enhances diagnostic accuracy through improved image quality but also offers a versatile framework that can potentially be extended to other imaging modalities, thereby broadening its clinical applicability.

On factors that influence deep learning-based dose prediction of head and neck tumors.

Gao R, Mody P, Rao C, Dankers F, Staring M

pubmed logopapersMay 22 2025
<i>Objective.</i>This study investigates key factors influencing deep learning-based dose prediction models for head and neck cancer radiation therapy. The goal is to evaluate model accuracy, robustness, and computational efficiency, and to identify key components necessary for optimal performance.<i>Approach.</i>We systematically analyze the impact of input and dose grid resolution, input type, loss function, model architecture, and noise on model performance. Two datasets are used: a public dataset (OpenKBP) and an in-house clinical dataset. Model performance is primarily evaluated using two metrics: dose score and dose-volume histogram (DVH) score.<i>Main results.</i>High-resolution inputs improve prediction accuracy (dose score and DVH score) by 8.6%-13.5% compared to low resolution. Using a combination of CT, planning target volumes, and organs-at-risk as input significantly enhances accuracy, with improvements of 57.4%-86.8% over using CT alone. Integrating mean absolute error (MAE) loss with value-based and criteria-based DVH loss functions further boosts DVH score by 7.2%-7.5% compared to MAE loss alone. In the robustness analysis, most models show minimal degradation under Poisson noise (0-0.3 Gy) but are more susceptible to adversarial noise (0.2-7.8 Gy). Notably, certain models, such as SwinUNETR, demonstrate superior robustness against adversarial perturbations.<i>Significance.</i>These findings highlight the importance of optimizing deep learning models and provide valuable guidance for achieving more accurate and reliable radiotherapy dose prediction.

SD-MAD: Sign-Driven Few-shot Multi-Anomaly Detection in Medical Images

Kaiyu Guo, Tan Pan, Chen Jiang, Zijian Wang, Brian C. Lovell, Limei Han, Yuan Cheng, Mahsa Baktashmotlagh

arxiv logopreprintMay 22 2025
Medical anomaly detection (AD) is crucial for early clinical intervention, yet it faces challenges due to limited access to high-quality medical imaging data, caused by privacy concerns and data silos. Few-shot learning has emerged as a promising approach to alleviate these limitations by leveraging the large-scale prior knowledge embedded in vision-language models (VLMs). Recent advancements in few-shot medical AD have treated normal and abnormal cases as a one-class classification problem, often overlooking the distinction among multiple anomaly categories. Thus, in this paper, we propose a framework tailored for few-shot medical anomaly detection in the scenario where the identification of multiple anomaly categories is required. To capture the detailed radiological signs of medical anomaly categories, our framework incorporates diverse textual descriptions for each category generated by a Large-Language model, under the assumption that different anomalies in medical images may share common radiological signs in each category. Specifically, we introduce SD-MAD, a two-stage Sign-Driven few-shot Multi-Anomaly Detection framework: (i) Radiological signs are aligned with anomaly categories by amplifying inter-anomaly discrepancy; (ii) Aligned signs are selected further to mitigate the effect of the under-fitting and uncertain-sample issue caused by limited medical data, employing an automatic sign selection strategy at inference. Moreover, we propose three protocols to comprehensively quantify the performance of multi-anomaly detection. Extensive experiments illustrate the effectiveness of our method.

CMRINet: Joint Groupwise Registration and Segmentation for Cardiac Function Quantification from Cine-MRI

Mohamed S. Elmahdy, Marius Staring, Patrick J. H. de Koning, Samer Alabed, Mahan Salehi, Faisal Alandejani, Michael Sharkey, Ziad Aldabbagh, Andrew J. Swift, Rob J. van der Geest

arxiv logopreprintMay 22 2025
Accurate and efficient quantification of cardiac function is essential for the estimation of prognosis of cardiovascular diseases (CVDs). One of the most commonly used metrics for evaluating cardiac pumping performance is left ventricular ejection fraction (LVEF). However, LVEF can be affected by factors such as inter-observer variability and varying pre-load and after-load conditions, which can reduce its reproducibility. Additionally, cardiac dysfunction may not always manifest as alterations in LVEF, such as in heart failure and cardiotoxicity diseases. An alternative measure that can provide a relatively load-independent quantitative assessment of myocardial contractility is myocardial strain and strain rate. By using LVEF in combination with myocardial strain, it is possible to obtain a thorough description of cardiac function. Automated estimation of LVEF and other volumetric measures from cine-MRI sequences can be achieved through segmentation models, while strain calculation requires the estimation of tissue displacement between sequential frames, which can be accomplished using registration models. These tasks are often performed separately, potentially limiting the assessment of cardiac function. To address this issue, in this study we propose an end-to-end deep learning (DL) model that jointly estimates groupwise (GW) registration and segmentation for cardiac cine-MRI images. The proposed anatomically-guided Deep GW network was trained and validated on a large dataset of 4-chamber view cine-MRI image series of 374 subjects. A quantitative comparison with conventional GW registration using elastix and two DL-based methods showed that the proposed model improved performance and substantially reduced computation time.

SAMba-UNet: Synergizing SAM2 and Mamba in UNet with Heterogeneous Aggregation for Cardiac MRI Segmentation

Guohao Huo, Ruiting Dai, Hao Tang

arxiv logopreprintMay 22 2025
To address the challenge of complex pathological feature extraction in automated cardiac MRI segmentation, this study proposes an innovative dual-encoder architecture named SAMba-UNet. The framework achieves cross-modal feature collaborative learning by integrating the vision foundation model SAM2, the state-space model Mamba, and the classical UNet. To mitigate domain discrepancies between medical and natural images, a Dynamic Feature Fusion Refiner is designed, which enhances small lesion feature extraction through multi-scale pooling and a dual-path calibration mechanism across channel and spatial dimensions. Furthermore, a Heterogeneous Omni-Attention Convergence Module (HOACM) is introduced, combining global contextual attention with branch-selective emphasis mechanisms to effectively fuse SAM2's local positional semantics and Mamba's long-range dependency modeling capabilities. Experiments on the ACDC cardiac MRI dataset demonstrate that the proposed model achieves a Dice coefficient of 0.9103 and an HD95 boundary error of 1.0859 mm, significantly outperforming existing methods, particularly in boundary localization for complex pathological structures such as right ventricular anomalies. This work provides an efficient and reliable solution for automated cardiac disease diagnosis, and the code will be open-sourced.

CT-Agent: A Multimodal-LLM Agent for 3D CT Radiology Question Answering

Yuren Mao, Wenyi Xu, Yuyang Qin, Yunjun Gao

arxiv logopreprintMay 22 2025
Computed Tomography (CT) scan, which produces 3D volumetric medical data that can be viewed as hundreds of cross-sectional images (a.k.a. slices), provides detailed anatomical information for diagnosis. For radiologists, creating CT radiology reports is time-consuming and error-prone. A visual question answering (VQA) system that can answer radiologists' questions about some anatomical regions on the CT scan and even automatically generate a radiology report is urgently needed. However, existing VQA systems cannot adequately handle the CT radiology question answering (CTQA) task for: (1) anatomic complexity makes CT images difficult to understand; (2) spatial relationship across hundreds slices is difficult to capture. To address these issues, this paper proposes CT-Agent, a multimodal agentic framework for CTQA. CT-Agent adopts anatomically independent tools to break down the anatomic complexity; furthermore, it efficiently captures the across-slice spatial relationship with a global-local token compression strategy. Experimental results on two 3D chest CT datasets, CT-RATE and RadGenome-ChestCT, verify the superior performance of CT-Agent.

Predictive value of machine learning for PD-L1 expression in NSCLC: a systematic review and meta-analysis.

Zheng T, Li X, Zhou L, Jin J

pubmed logopapersMay 22 2025
As machine learning (ML) continuously develops in cancer diagnosis and treatment, some researchers have attempted to predict the expression of programmed death ligand-1 (PD-L1) in non-small cell lung cancer (NSCLC) by ML. However, there is a lack of systematic evidence on the effectiveness of ML. We conducted a thorough search across Embase, PubMed, the Cochrane Library, and Web of Science from inception to December 14th, 2023.A systematic review and meta-analysis was conducted to assess the value of ML for predicting PD-L1 expression in NSCLC. Totally 30 studies with 12,898 NSCLC patients were included. The thresholds of PD-L1 expression level were < 1%, 1-49%, and ≥ 50%. In the validation set, in the binary classification for PD-L1 ≥ 1%, the pooled C-index was 0.646 (95%CI: 0.587-0.705), 0.799 (95%CI: 0.782-0.817), 0.806 (95%CI: 0.753-0.858), and 0.800 (95%CI: 0.717-0.883), respectively, for the clinical feature-, radiomics-, radiomics + clinical feature-, and pathomics-based ML models; in the binary classification for PD-L1 ≥ 50%, the pooled C-index was 0.649 (95%CI: 0.553-0.744), 0.771 (95%CI: 0.728-0.814), and 0.826 (95%CI: 0.783-0.869), respectively, for the clinical feature-, radiomics-, and radiomics + clinical feature-based ML models. At present, radiomics- or pathomics-based ML methods are applied for the prediction of PD-L1 expression in NSCLC, which both achieve satisfactory accuracy. In particular, the radiomics-based ML method seems to have wider clinical applicability as a non-invasive diagnostic tool. Both radiomics and pathomics serve as processing methods for medical images. In the future, we expect to develop medical image-based DL methods for intelligently predicting PD-L1 expression.
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