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Harnessing Advanced Machine Learning Techniques for Microscopic Vessel Segmentation in Pulmonary Fibrosis Using Novel Hierarchical Phase-Contrast Tomography Images.

Vasudev P, Azimbagirad M, Aslani S, Xu M, Wang Y, Chapman R, Coleman H, Werlein C, Walsh C, Lee P, Tafforeau P, Jacob J

pubmed logopapersMay 9 2025
 Fibrotic lung disease is a progressive illness that causes scarring and ultimately respiratory failure, with irreversible damage by the time it is diagnosed on computed tomography imaging. Recent research postulates the role of the lung vasculature on the pathogenesis of the disease. With the recent development of high-resolution hierarchical phase-contrast tomography (HiP-CT), we have the potential to understand and detect changes in the lungs long before conventional imaging. However, to gain quantitative insight into vascular changes you first need to be able to segment the vessels before further downstream analysis can be conducted. Aside from this, HiP-CT generates large-volume, high-resolution data which is time-consuming and expensive to label.  This project aims to qualitatively assess the latest machine learning methods for vessel segmentation in HiP-CT data to enable label propagation as the first step for imaging biomarker discovery, with the goal to identify early-stage interstitial lung disease amenable to treatment, before fibrosis begins.  Semisupervised learning (SSL) has become a growing method to tackle sparsely labeled datasets due to its leveraging of unlabeled data. In this study, we will compare two SSL methods; Seg PL, based on pseudo-labeling, and MisMatch, using consistency regularization against state-of-the-art supervised learning method, nnU-Net, on vessel segmentation in sparsely labeled lung HiP-CT data.  On initial experimentation, both MisMatch and SegPL showed promising performance on qualitative review. In comparison with supervised learning, both MisMatch and SegPL showed better out-of-distribution performance within the same sample (different vessel morphology and texture vessels), though supervised learning provided more consistent segmentations for well-represented labels in the limited annotations.  Further quantitative research is required to better assess the generalizability of these findings, though they show promising first steps toward leveraging this novel data to tackle fibrotic lung disease.

DFEN: Dual Feature Equalization Network for Medical Image Segmentation

Jianjian Yin, Yi Chen, Chengyu Li, Zhichao Zheng, Yanhui Gu, Junsheng Zhou

arxiv logopreprintMay 9 2025
Current methods for medical image segmentation primarily focus on extracting contextual feature information from the perspective of the whole image. While these methods have shown effective performance, none of them take into account the fact that pixels at the boundary and regions with a low number of class pixels capture more contextual feature information from other classes, leading to misclassification of pixels by unequal contextual feature information. In this paper, we propose a dual feature equalization network based on the hybrid architecture of Swin Transformer and Convolutional Neural Network, aiming to augment the pixel feature representations by image-level equalization feature information and class-level equalization feature information. Firstly, the image-level feature equalization module is designed to equalize the contextual information of pixels within the image. Secondly, we aggregate regions of the same class to equalize the pixel feature representations of the corresponding class by class-level feature equalization module. Finally, the pixel feature representations are enhanced by learning weights for image-level equalization feature information and class-level equalization feature information. In addition, Swin Transformer is utilized as both the encoder and decoder, thereby bolstering the ability of the model to capture long-range dependencies and spatial correlations. We conducted extensive experiments on Breast Ultrasound Images (BUSI), International Skin Imaging Collaboration (ISIC2017), Automated Cardiac Diagnosis Challenge (ACDC) and PH$^2$ datasets. The experimental results demonstrate that our method have achieved state-of-the-art performance. Our code is publicly available at https://github.com/JianJianYin/DFEN.

Application of Artificial Intelligence in Cardio-Oncology Imaging for Cancer Therapy-Related Cardiovascular Toxicity: Systematic Review.

Mushcab H, Al Ramis M, AlRujaib A, Eskandarani R, Sunbul T, AlOtaibi A, Obaidan M, Al Harbi R, Aljabri D

pubmed logopapersMay 9 2025
Artificial intelligence (AI) is a revolutionary tool yet to be fully integrated into several health care sectors, including medical imaging. AI can transform how medical imaging is conducted and interpreted, especially in cardio-oncology. This study aims to systematically review the available literature on the use of AI in cardio-oncology imaging to predict cardiotoxicity and describe the possible improvement of different imaging modalities that can be achieved if AI is successfully deployed to routine practice. We conducted a database search in PubMed, Ovid MEDLINE, Cochrane Library, CINAHL, and Google Scholar from inception to 2023 using the AI research assistant tool (Elicit) to search for original studies reporting AI outcomes in adult patients diagnosed with any cancer and undergoing cardiotoxicity assessment. Outcomes included incidence of cardiotoxicity, left ventricular ejection fraction, risk factors associated with cardiotoxicity, heart failure, myocardial dysfunction, signs of cancer therapy-related cardiovascular toxicity, echocardiography, and cardiac magnetic resonance imaging. Descriptive information about each study was recorded, including imaging technique, AI model, outcomes, and limitations. The systematic search resulted in 7 studies conducted between 2018 and 2023, which are included in this review. Most of these studies were conducted in the United States (71%), included patients with breast cancer (86%), and used magnetic resonance imaging as the imaging modality (57%). The quality assessment of the studies had an average of 86% compliance in all of the tool's sections. In conclusion, this systematic review demonstrates the potential of AI to enhance cardio-oncology imaging for predicting cardiotoxicity in patients with cancer. Our findings suggest that AI can enhance the accuracy and efficiency of cardiotoxicity assessments. However, further research through larger, multicenter trials is needed to validate these applications and refine AI technologies for routine use, paving the way for improved patient outcomes in cancer survivors at risk of cardiotoxicity.

Deep learning for Parkinson's disease classification using multimodal and multi-sequences PET/MR images.

Chang Y, Liu J, Sun S, Chen T, Wang R

pubmed logopapersMay 9 2025
We aimed to use deep learning (DL) techniques to accurately differentiate Parkinson's disease (PD) from multiple system atrophy (MSA), which share similar clinical presentations. In this retrospective analysis, 206 patients who underwent PET/MR imaging at the Chinese PLA General Hospital were included, having been clinically diagnosed with either PD or MSA; an additional 38 healthy volunteers served as normal controls (NC). All subjects were randomly assigned to the training and test sets at a ratio of 7:3. The input to the model consists of 10 two-dimensional (2D) slices in axial, coronal, and sagittal planes from multi-modal images. A modified Residual Block Network with 18 layers (ResNet18) was trained with different modal images, to classify PD, MSA, and NC. A four-fold cross-validation method was applied in the training set. Performance evaluations included accuracy, precision, recall, F1 score, Receiver operating characteristic (ROC), and area under the ROC curve (AUC). Six single-modal models and seven multi-modal models were trained and tested. The PET models outperformed MRI models. The <sup>11</sup>C-methyl-N-2β-carbomethoxy-3β-(4-fluorophenyl)-tropanel (<sup>11</sup>C-CFT) -Apparent Diffusion Coefficient (ADC) model showed the best classification, which resulted in 0.97 accuracy, 0.93 precision, 0.95 recall, 0.92 F1, and 0.96 AUC. In the test set, the accuracy, precision, recall, and F1 score of the CFT-ADC model were 0.70, 0.73, 0.93, and 0.82, respectively. The proposed DL method shows potential as a high-performance assisting tool for the accurate diagnosis of PD and MSA. A multi-modal and multi-sequence model could further enhance the ability to classify PD.

Adherence to SVS Abdominal Aortic Aneurysm Guidelines Among Pati ents Detected by AI-Based Algorithm.

Wilson EM, Yao K, Kostiuk V, Bader J, Loh S, Mojibian H, Fischer U, Ochoa Chaar CI, Aboian E

pubmed logopapersMay 9 2025
This study evaluates adherence to the latest Society for Vascular Surgery (SVS) guidelines on imaging surveillance, physician evaluation, and surgical intervention for abdominal aortic aneurysm (AAA). AI-based natural language processing applied retrospectively identified AAA patients from imaging scans at a tertiary care center between January-March 2019 and 2021, excluding the pandemic period. Retrospective chart review assessed demographics, comorbidities, imaging, and follow-up adherence. Statistical significance was set at p<0.05. Among 479 identified patients, 279 remained in the final cohort following exclusion of deceased patients. Imaging surveillance adherence was 67.7% (189/279), with males comprising 72.5% (137/189) (Figure 1). The mean age for adherent patients was 73.9 (SD ±9.5) vs. 75.2 (SD ±10.8) for non-adherent patients (Table 1). Adherent females were significantly younger than non-adherent females (76.7 vs. 81.1 years; p=0.003) with no significant age difference in adherent males. Adherent patients were more likely to be evaluated by a vascular provider within six months (p<0.001), but aneurysm size did not affect imaging adherence: 3.0-4.0cm (p=0.24), 4.0-5.0cm (p=0.88), >5.0cm (p=0.29). Based on SVS surgical criteria, 18 males (AAA >5.5cm) and 17 females (AAA >5.0cm) qualified for intervention and repair rates increased in 2021. 34 males (20 in 2019 v. 14 in 2021) and 7 females (2021 only) received surgical intervention below the threshold for repair. Despite consistent SVS guidelines, adherence remains moderate. AI-based detection and follow-up algorithms may enhance adherence and long-term AAA patient outcomes, however further research is needed to assess the specific impacts of AI.

Computationally Efficient Diffusion Models in Medical Imaging: A Comprehensive Review

Abdullah, Tao Huang, Ickjai Lee, Euijoon Ahn

arxiv logopreprintMay 9 2025
The diffusion model has recently emerged as a potent approach in computer vision, demonstrating remarkable performances in the field of generative artificial intelligence. Capable of producing high-quality synthetic images, diffusion models have been successfully applied across a range of applications. However, a significant challenge remains with the high computational cost associated with training and generating these models. This study focuses on the efficiency and inference time of diffusion-based generative models, highlighting their applications in both natural and medical imaging. We present the most recent advances in diffusion models by categorizing them into three key models: the Denoising Diffusion Probabilistic Model (DDPM), the Latent Diffusion Model (LDM), and the Wavelet Diffusion Model (WDM). These models play a crucial role in medical imaging, where producing fast, reliable, and high-quality medical images is essential for accurate analysis of abnormalities and disease diagnosis. We first investigate the general framework of DDPM, LDM, and WDM and discuss the computational complexity gap filled by these models in natural and medical imaging. We then discuss the current limitations of these models as well as the opportunities and future research directions in medical imaging.

Computationally enabled polychromatic polarized imaging enables mapping of matrix architectures that promote pancreatic ductal adenocarcinoma dissemination.

Qian G, Zhang H, Liu Y, Shribak M, Eliceiri KW, Provenzano PP

pubmed logopapersMay 9 2025
Pancreatic ductal adenocarcinoma (PDA) is an extremely metastatic and lethal disease. In PDA, extracellular matrix (ECM) architectures known as Tumor-Associated Collagen Signatures (TACS) regulate invasion and metastatic spread in both early dissemination and in late-stage disease. As such, TACS has been suggested as a biomarker to aid in pathologic assessment. However, despite its significance, approaches to quantitatively capture these ECM patterns currently require advanced optical systems with signaling processing analysis. Here we present an expansion of polychromatic polarized microscopy (PPM) with inherent angular information coupled to machine learning and computational pixel-wise analysis of TACS. Using this platform, we are able to accurately capture TACS architectures in H&E stained histology sections directly through PPM contrast. Moreover, PPM facilitated identification of transitions to dissemination architectures, i.e., transitions from sequestration through expansion to dissemination from both PanINs and throughout PDA. Lastly, PPM evaluation of architectures in liver metastases, the most common metastatic site for PDA, demonstrates TACS-mediated focal and local invasion as well as identification of unique patterns anchoring aligned fibers into normal-adjacent tumor, suggesting that these patterns may be precursors to metastasis expansion and local spread from micrometastatic lesions. Combined, these findings demonstrate that PPM coupled to computational platforms is a powerful tool for analyzing ECM architecture that can be employed to advance cancer microenvironment studies and provide clinically relevant diagnostic information.

Comparison between multimodal foundation models and radiologists for the diagnosis of challenging neuroradiology cases with text and images.

Le Guellec B, Bruge C, Chalhoub N, Chaton V, De Sousa E, Gaillandre Y, Hanafi R, Masy M, Vannod-Michel Q, Hamroun A, Kuchcinski G

pubmed logopapersMay 9 2025
The purpose of this study was to compare the ability of two multimodal models (GPT-4o and Gemini 1.5 Pro) with that of radiologists to generate differential diagnoses from textual context alone, key images alone, or a combination of both using complex neuroradiology cases. This retrospective study included neuroradiology cases from the "Diagnosis Please" series published in the Radiology journal between January 2008 and September 2024. The two multimodal models were asked to provide three differential diagnoses from textual context alone, key images alone, or the complete case. Six board-certified neuroradiologists solved the cases in the same setting, randomly assigned to two groups: context alone first and images alone first. Three radiologists solved the cases without, and then with the assistance of Gemini 1.5 Pro. An independent radiologist evaluated the quality of the image descriptions provided by GPT-4o and Gemini for each case. Differences in correct answers between multimodal models and radiologists were analyzed using McNemar test. GPT-4o and Gemini 1.5 Pro outperformed radiologists using clinical context alone (mean accuracy, 34.0 % [18/53] and 44.7 % [23.7/53] vs. 16.4 % [8.7/53]; both P < 0.01). Radiologists outperformed GPT-4o and Gemini 1.5 Pro using images alone (mean accuracy, 42.0 % [22.3/53] vs. 3.8 % [2/53], and 7.5 % [4/53]; both P < 0.01) and the complete cases (48.0 % [25.6/53] vs. 34.0 % [18/53], and 38.7 % [20.3/53]; both P < 0.001). While radiologists improved their accuracy when combining multimodal information (from 42.1 % [22.3/53] for images alone to 50.3 % [26.7/53] for complete cases; P < 0.01), GPT-4o and Gemini 1.5 Pro did not benefit from the multimodal context (from 34.0 % [18/53] for text alone to 35.2 % [18.7/53] for complete cases for GPT-4o; P = 0.48, and from 44.7 % [23.7/53] to 42.8 % [22.7/53] for Gemini 1.5 Pro; P = 0.54). Radiologists benefited significantly from the suggestion of Gemini 1.5 Pro, increasing their accuracy from 47.2 % [25/53] to 56.0 % [27/53] (P < 0.01). Both GPT-4o and Gemini 1.5 Pro correctly identified the imaging modality in 53/53 (100 %) and 51/53 (96.2 %) cases, respectively, but frequently failed to identify key imaging findings (43/53 cases [81.1 %] with incorrect identification of key imaging findings for GPT-4o and 50/53 [94.3 %] for Gemini 1.5). Radiologists show a specific ability to benefit from the integration of textual and visual information, whereas multimodal models mostly rely on the clinical context to suggest diagnoses.

Noise-Consistent Siamese-Diffusion for Medical Image Synthesis and Segmentation

Kunpeng Qiu, Zhiqiang Gao, Zhiying Zhou, Mingjie Sun, Yongxin Guo

arxiv logopreprintMay 9 2025
Deep learning has revolutionized medical image segmentation, yet its full potential remains constrained by the paucity of annotated datasets. While diffusion models have emerged as a promising approach for generating synthetic image-mask pairs to augment these datasets, they paradoxically suffer from the same data scarcity challenges they aim to mitigate. Traditional mask-only models frequently yield low-fidelity images due to their inability to adequately capture morphological intricacies, which can critically compromise the robustness and reliability of segmentation models. To alleviate this limitation, we introduce Siamese-Diffusion, a novel dual-component model comprising Mask-Diffusion and Image-Diffusion. During training, a Noise Consistency Loss is introduced between these components to enhance the morphological fidelity of Mask-Diffusion in the parameter space. During sampling, only Mask-Diffusion is used, ensuring diversity and scalability. Comprehensive experiments demonstrate the superiority of our method. Siamese-Diffusion boosts SANet's mDice and mIoU by 3.6% and 4.4% on the Polyps, while UNet improves by 1.52% and 1.64% on the ISIC2018. Code is available at GitHub.

A diffusion-stimulated CT-US registration model with self-supervised learning and synthetic-to-real domain adaptation.

Li S, Jia B, Huang W, Zhang X, Zhou W, Wang C, Teng G

pubmed logopapersMay 8 2025
In abdominal interventional procedures, achieving precise registration of 2D ultrasound (US) frames with 3D computed tomography (CT) scans presents a significant challenge. Traditional tracking methods often rely on high-precision sensors, which can be prohibitively expensive. Furthermore, the clinical need for real-time registration with a broad capture range frequently exceeds the performance of standard image-based optimization techniques. Current automatic registration methods that utilize deep learning are either heavily reliant on manual annotations for training or struggle to effectively bridge the gap between different imaging domains. To address these challenges, we propose a novel diffusion-stimulated CT-US registration model. This model harnesses the physical diffusion properties of US to generate synthetic US images from preoperative CT data. Additionally, we introduce a synthetic-to-real domain adaptation strategy using a diffusion model to mitigate the discrepancies between real and synthetic US images. A dual-stream self-supervised regression neural network, trained on these synthetic images, is then used to estimate the pose within the CT space. The effectiveness of our proposed approach is verified through validation using US and CT scans from a dual-modality human abdominal phantom. The results of our experiments confirm that our method can accurately initialize the US image pose within an acceptable range of error and subsequently refine it to achieve precise alignment. This enables real-time, tracker-independent, and robust rigid registration of CT and US images.
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