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Self-supervised network predicting neoadjuvant chemoradiotherapy response to locally advanced rectal cancer patients.

Chen Q, Dang J, Wang Y, Li L, Gao H, Li Q, Zhang T, Bai X

pubmed logopapersJul 1 2025
Radiographic imaging is a non-invasive technique of considerable importance for evaluating tumor treatment response. However, redundancy in CT data and the lack of labeled data make it challenging to accurately assess the response of locally advanced rectal cancer (LARC) patients to neoadjuvant chemoradiotherapy (nCRT) using current imaging indicators. In this study, we propose a novel learning framework to automatically predict the response of LARC patients to nCRT. Specifically, we develop a deep learning network called the Expand Intensive Attention Network (EIA-Net), which enhances the network's feature extraction capability through cascaded 3D convolutions and coordinate attention. Instance-oriented collaborative self-supervised learning (IOC-SSL) is proposed to leverage unlabeled data for training, reducing the reliance on labeled data. In a dataset consisting of 1,575 volumes, the proposed method achieves an AUC score of 0.8562. The dataset includes two distinct parts: the self-supervised dataset containing 1,394 volumes and the supervised dataset comprising 195 volumes. Analysis of the lifetime predictions reveals that patients with pathological complete response (pCR) predicted by EIA-Net exhibit better overall survival (OS) compared to non-pCR patients with LARC. The retrospective study demonstrates that imaging-based pCR prediction for patients with low rectal cancer can assist clinicians in making informed decisions regarding the need for Miles operation, thereby improving the likelihood of anal preservation, with an AUC of 0.8222. These results underscore the potential of our method to enhance clinical decision-making, offering a promising tool for personalized treatment and improved patient outcomes in LARC management.

Federated Learning in radiomics: A comprehensive meta-survey on medical image analysis.

Raza A, Guzzo A, Ianni M, Lappano R, Zanolini A, Maggiolini M, Fortino G

pubmed logopapersJul 1 2025
Federated Learning (FL) has emerged as a promising approach for collaborative medical image analysis while preserving data privacy, making it particularly suitable for radiomics tasks. This paper presents a systematic meta-analysis of recent surveys on Federated Learning in Medical Imaging (FL-MI), published in reputable venues over the past five years. We adopt the PRISMA methodology, categorizing and analyzing the existing body of research in FL-MI. Our analysis identifies common trends, challenges, and emerging strategies for implementing FL in medical imaging, including handling data heterogeneity, privacy concerns, and model performance in non-IID settings. The paper also highlights the most widely used datasets and a comparison of adopted machine learning models. Moreover, we examine FL frameworks in FL-MI applications, such as tumor detection, organ segmentation, and disease classification. We identify several research gaps, including the need for more robust privacy protection. Our findings provide a comprehensive overview of the current state of FL-MI and offer valuable directions for future research and development in this rapidly evolving field.

EfficientNet-Based Attention Residual U-Net With Guided Loss for Breast Tumor Segmentation in Ultrasound Images.

Jasrotia H, Singh C, Kaur S

pubmed logopapersJul 1 2025
Breast cancer poses a major health concern for women globally. Effective segmentation of breast tumors for ultrasound images is crucial for early diagnosis and treatment. Conventional convolutional neural networks have shown promising results in this domain but face challenges due to image complexities and are computationally expensive, limiting their practical application in real-time clinical settings. We propose Eff-AResUNet-GL, a segmentation model using EfficienetNet-B3 as the encoder. This design integrates attention gates in skip connections to focus on significant features and residual blocks in the decoder to retain details and reduce gradient loss. Additionally, guided loss functions are applied at each decoder layer to generate better features, subsequently improving segmentation accuracy. Experimental results on BUSIS and Dataset B demonstrate that Eff-AResUNet-GL achieves superior performance and computational efficiency compared to state-of-the-art models, showing robustness in handling complex breast ultrasound images. Eff-AResUNet-GL offers a practical, high-performing solution for breast tumor segmentation, demonstrating potential clinical through improved segmentation accuracy and efficiency.

Tailored self-supervised pretraining improves brain MRI diagnostic models.

Huang X, Wang Z, Zhou W, Yang K, Wen K, Liu H, Huang S, Lyu M

pubmed logopapersJul 1 2025
Self-supervised learning has shown potential in enhancing deep learning methods, yet its application in brain magnetic resonance imaging (MRI) analysis remains underexplored. This study seeks to leverage large-scale, unlabeled public brain MRI datasets to improve the performance of deep learning models in various downstream tasks for the development of clinical decision support systems. To enhance training efficiency, data filtering methods based on image entropy and slice positions were developed, condensing a combined dataset of approximately 2 million images from fastMRI-brain, OASIS-3, IXI, and BraTS21 into a more focused set of 250 K images enriched with brain features. The Momentum Contrast (MoCo) v3 algorithm was then employed to learn these image features, resulting in robustly pretrained models specifically tailored to brain MRI. The pretrained models were subsequently evaluated in tumor classification, lesion detection, hippocampal segmentation, and image reconstruction tasks. The results demonstrate that our brain MRI-oriented pretraining outperformed both ImageNet pretraining and pretraining on larger multi-organ, multi-modality medical datasets, achieving a ∼2.8 % increase in 4-class tumor classification accuracy, a ∼0.9 % improvement in tumor detection mean average precision, a ∼3.6 % gain in adult hippocampal segmentation Dice score, and a ∼0.1 PSNR improvement in reconstruction at 2-fold acceleration. This study underscores the potential of self-supervised learning for brain MRI using large-scale, tailored datasets derived from public sources.

CASCADE-FSL: Few-shot learning for collateral evaluation in ischemic stroke.

Aktar M, Tampieri D, Xiao Y, Rivaz H, Kersten-Oertel M

pubmed logopapersJul 1 2025
Assessing collateral circulation is essential in determining the best treatment for ischemic stroke patients as good collaterals lead to different treatment options, i.e., thrombectomy, whereas poor collaterals can adversely affect the treatment by leading to excess bleeding and eventually death. To reduce inter- and intra-rater variability and save time in radiologist assessments, computer-aided methods, mainly using deep neural networks, have gained popularity. The current literature demonstrates effectiveness when using balanced and extensive datasets in deep learning; however, such data sets are scarce for stroke, and the number of data samples for poor collateral cases is often limited compared to those for good collaterals. We propose a novel approach called CASCADE-FSL to distinguish poor collaterals effectively. Using a small, unbalanced data set, we employ a few-shot learning approach for training using a 2D ResNet-50 as a backbone and designating good and intermediate cases as two normal classes. We identify poor collaterals as anomalies in comparison to the normal classes. Our novel approach achieves an overall accuracy, sensitivity, and specificity of 0.88, 0.88, and 0.89, respectively, demonstrating its effectiveness in addressing the imbalanced dataset challenge and accurately identifying poor collateral circulation cases.

Quantitative Ischemic Lesions of Portable Low-Field Strength MRI Using Deep Learning-Based Super-Resolution.

Bian Y, Wang L, Li J, Yang X, Wang E, Li Y, Liu Y, Xiang L, Yang Q

pubmed logopapersJul 1 2025
Deep learning-based synthetic super-resolution magnetic resonance imaging (SynthMRI) may improve the quantitative lesion performance of portable low-field strength magnetic resonance imaging (LF-MRI). The aim of this study is to evaluate whether SynthMRI improves the diagnostic performance of LF-MRI in assessing ischemic lesions. We retrospectively included 178 stroke patients and 104 healthy controls with both LF-MRI and high-field strength magnetic resonance imaging (HF-MRI) examinations. Using HF-MRI as the ground truth, the deep learning-based super-resolution framework (SCUNet [Swin-Conv-UNet]) was pretrained using large-scale open-source data sets to generate SynthMRI images from LF-MRI images. Participants were split into a training set (64.2%) to fine-tune the pretrained SCUNet, and a testing set (35.8%) to evaluate the performance of SynthMRI. Sensitivity and specificity of LF-MRI and SynthMRI were assessed. Agreement with HF-MRI for Alberta Stroke Program Early CT Score in the anterior and posterior circulation (diffusion-weighted imaging-Alberta Stroke Program Early CT Score and diffusion-weighted imaging-posterior circulation Alberta Stroke Program Early CT Score) was evaluated using intraclass correlation coefficients (ICCs). Agreement with HF-MRI for lesion volume and mean apparent diffusion coefficient (ADC) within lesions was assessed using both ICCs and Pearson correlation coefficients. SynthMRI demonstrated significantly higher sensitivity and specificity than LF-MRI (89.0% [83.3%-94.6%] versus 77.1% [69.5%-84.7%]; <i>P</i><0.001 and 91.3% [84.7%-98.0%] versus 71.0% [60.3%-81.7%]; <i>P</i><0.001, respectively). The ICCs of diffusion-weighted imaging-Alberta Stroke Program Early CT Score between SynthMRI and HF-MRI were also better than that between LF-MRI and HF-MRI (0.952 [0.920-0.972] versus 0.797 [0.678-0.876], <i>P</i><0.001). For lesion volume and mean apparent diffusion coefficient within lesions, SynthMRI showed significantly higher agreement (<i>P</i><0.001) with HF-MRI (ICC>0.85, <i>r</i>>0.78) than LF-MRI (ICC>0.45, <i>r</i>>0.35). Furthermore, for lesions during various poststroke phases, SynthMRI exhibited significantly higher agreement with HF-MRI than LF-MRI during the early hyperacute and subacute phases. SynthMRI demonstrates high agreement with HF-MRI in detecting and quantifying ischemic lesions and is better than LF-MRI, particularly for lesions during the early hyperacute and subacute phases.

Development and Validation an AI Model to Improve the Diagnosis of Deep Infiltrating Endometriosis for Junior Sonologists.

Xu J, Zhang A, Zheng Z, Cao J, Zhang X

pubmed logopapersJul 1 2025
This study aims to develop and validate an artificial intelligence (AI) model based on ultrasound (US) videos and images to improve the performance of junior sonologists in detecting deep infiltrating endometriosis (DE). In this retrospective study, data were collected from female patients who underwent US examinations and had DE. The US image records were divided into two parts. First, during the model development phase, an AI-DE model was trained employing YOLOv8 to detect pelvic DE nodules. Subsequently, its clinical applicability was evaluated by comparing the diagnostic performance of junior sonologists with and without AI-model assistance. The AI-DE model was trained using 248 images, which demonstrated high performance, with a mAP50 (mean Average Precision at IoU threshold 0.5) of 0.9779 on the test set. Total 147 images were used for evaluate the diagnostic performance. The diagnostic performance of junior sonologists improved with the assistance of the AI-DE model. The area under the receiver operating characteristic (AUROC) curve improved from 0.748 (95% CI, 0.624-0.867) to 0.878 (95% CI, 0.792-0.964; p < 0.0001) for junior sonologist A, and from 0.713 (95% CI, 0.592-0.835) to 0.798 (95% CI, 0.677-0.919; p < 0.0001) for junior sonologist B. Notably, the sensitivity of both sonologists increased significantly, with the largest increase from 77.42% to 94.35%. The AI-DE model based on US images showed good performance in DE detection and significantly improved the diagnostic performance of junior sonologists.

A comparison of an integrated and image-only deep learning model for predicting the disappearance of indeterminate pulmonary nodules.

Wang J, Cai J, Tang W, Dudurych I, van Tuinen M, Vliegenthart R, van Ooijen P

pubmed logopapersJul 1 2025
Indeterminate pulmonary nodules (IPNs) require follow-up CT to assess potential growth; however, benign nodules may disappear. Accurately predicting whether IPNs will resolve is a challenge for radiologists. Therefore, we aim to utilize deep-learning (DL) methods to predict the disappearance of IPNs. This retrospective study utilized data from the Dutch-Belgian Randomized Lung Cancer Screening Trial (NELSON) and Imaging in Lifelines (ImaLife) cohort. Participants underwent follow-up CT to determine the evolution of baseline IPNs. The NELSON data was used for model training. External validation was performed in ImaLife. We developed integrated DL-based models that incorporated CT images and demographic data (age, sex, smoking status, and pack years). We compared the performance of integrated methods with those limited to CT images only and calculated sensitivity, specificity, and area under the receiver operating characteristic curve (AUC). From a clinical perspective, ensuring high specificity is critical, as it minimizes false predictions of non-resolving nodules that should be monitored for evolution on follow-up CTs. Feature importance was calculated using SHapley Additive exPlanations (SHAP) values. The training dataset included 840 IPNs (134 resolving) in 672 participants. The external validation dataset included 111 IPNs (46 resolving) in 65 participants. On the external validation set, the performance of the integrated model (sensitivity, 0.50; 95 % CI, 0.35-0.65; specificity, 0.91; 95 % CI, 0.80-0.96; AUC, 0.82; 95 % CI, 0.74-0.90) was comparable to that solely trained on CT image (sensitivity, 0.41; 95 % CI, 0.27-0.57; specificity, 0.89; 95 % CI, 0.78-0.95; AUC, 0.78; 95 % CI, 0.69-0.86; P = 0.39). The top 10 most important features were all image related. Deep learning-based models can predict the disappearance of IPNs with high specificity. Integrated models using CT scans and clinical data had comparable performance to those using only CT images.

Comparison of CNNs and Transformer Models in Diagnosing Bone Metastases in Bone Scans Using Grad-CAM.

Pak S, Son HJ, Kim D, Woo JY, Yang I, Hwang HS, Rim D, Choi MS, Lee SH

pubmed logopapersJul 1 2025
Convolutional neural networks (CNNs) have been studied for detecting bone metastases on bone scans; however, the application of ConvNeXt and transformer models has not yet been explored. This study aims to evaluate the performance of various deep learning models, including the ConvNeXt and transformer models, in diagnosing metastatic lesions from bone scans. We retrospectively analyzed bone scans from patients with cancer obtained at 2 institutions: the training and validation sets (n=4626) were from Hospital 1 and the test set (n=1428) was from Hospital 2. The deep learning models evaluated included ResNet18, the Data-Efficient Image Transformer (DeiT), the Vision Transformer (ViT Large 16), the Swin Transformer (Swin Base), and ConvNeXt Large. Gradient-weighted class activation mapping (Grad-CAM) was used for visualization. Both the validation set and the test set demonstrated that the ConvNeXt large model (0.969 and 0.885, respectively) exhibited the best performance, followed by the Swin Base model (0.965 and 0.840, respectively), both of which significantly outperformed ResNet (0.892 and 0.725, respectively). Subgroup analyses revealed that all the models demonstrated greater diagnostic accuracy for patients with polymetastasis compared with those with oligometastasis. Grad-CAM visualization revealed that the ConvNeXt Large model focused more on identifying local lesions, whereas the Swin Base model focused on global areas such as the axial skeleton and pelvis. Compared with traditional CNN and transformer models, the ConvNeXt model demonstrated superior diagnostic performance in detecting bone metastases from bone scans, especially in cases of polymetastasis, suggesting its potential in medical image analysis.
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