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Radiomics-based machine learning atherosclerotic carotid artery disease in ultrasound: systematic review with meta-analysis of RQS.

Vacca S, Scicolone R, Pisu F, Cau R, Yang Q, Annoni A, Pontone G, Costa F, Paraskevas KI, Nicolaides A, Suri JS, Saba L

pubmed logopapersJun 9 2025
Stroke, a leading global cause of mortality and neurological disability, is often associated with atherosclerotic carotid artery disease. Distinguishing between symptomatic and asymptomatic carotid artery disease is crucial for appropriate treatment decisions. Radiomics, a quantitative image analysis technique, and machine learning (ML) have emerged as promising tools in Ultrasound (US) imaging, potentially providing a helpful tool in the screening of such lesions. Pubmed, Web of Science and Scopus databases were searched for relevant studies published from January 2005 to May 2023. The Radiomics Quality Score (RQS) was used to assess methodological quality of studies included in the review. The Quality Assessment of Diagnostic Accuracy Studies (QUADAS-2) assessed the risk of bias. Sensitivity, specificity, and logarithmic diagnostic odds ratio (logDOR) meta-analyses have been conducted, alongside an influence analysis. RQS assessed methodological quality, revealing an overall low score and consistent findings with other radiology domains. QUADAS-2 indicated an overall low risk, except for two studies with high bias. The meta-analysis demonstrated that radiomics-based ML models for predicting culprit plaques on US had a satisfactory performance, with a sensitivity of 0.84 and specificity of 0.82. The logDOR analysis confirmed the positive results, yielding a pooled logDOR of 3.54. The summary ROC curve provided an AUC of 0.887. Radiomics combined with ML provide high sensitivity and low false positive rate for carotid plaque vulnerability assessment on US. However, current evidence is not definitive, given the low overall study quality and high inter-study heterogeneity. High quality, prospective studies are needed to confirm the potential of these promising techniques.

Data Driven Models Merging Geometric, Biomechanical, and Clinical Data to Assess the Rupture of Abdominal Aortic Aneurysms.

Alloisio M, Siika A, Roy J, Zerwes S, Hyhlik-Duerr A, Gasser TC

pubmed logopapersJun 6 2025
Despite elective repair of a large portion of stable abdominal aortic aneurysms (AAAs), the diameter criterion cannot prevent all small AAA ruptures. Since rupture depends on many factors, this study explored whether machine learning (ML) models (logistic regression [LogR], linear and non-linear support vector machine [SVM-Lin and SVM-Nlin], and Gaussian Naïve Bayes [GNB]) might improve the diameter based risk assessment by comparing already ruptured (diameter 52.8 - 174.5 mm) with asymptomatic (diameter 40.4 - 95.5 mm) aortas. A retrospective case-control observational study included ruptured AAAs from two centres (2010 - 2012) with computed tomography angiography images for finite element analysis. Clinical patient data and geometric and biomechanical AAA properties were fed into ML models, whose output was compared with the results from intact cases. Classifications were explored for all cases and those having diameters below 70 mm. All data trained and validated the ML models, with a five fold cross-validation. SHapley Additive exPlanations (SHAP) analysis ranked the factors for rupture identification. One hundred and seven ruptured (20% female, mean age 77 years, mean diameter 86.3 mm) and 200 non-ruptured aneurysmal infrarenal aortas (22% female, mean age 74 years, mean diameter 57 mm) were investigated through cross-validation methods. Given the entire dataset, the diameter threshold of 55 mm in men and 50 mm in women provided a 58% accurate rupture classification. It was 99% sensitive (AAA rupture identified correctly) and 36% specific (intact AAAs identified correctly). ML models improved accuracy (LogR 90.2%, SVM-Lin 89.48%, SVM-Nlin 88.7%, and GNB 86.4%); accuracy decreased when trained on the ≤ 70 mm group (55/50 mm diameter threshold 44.2%, LogR 82.5%, SVM-Lin 83.6%, SVM-Nlin 65.9%, and GNB: 84.7%). SHAP ranked biomechanical parameters other than the diameter as the most relevant. A multiparameter estimate enhanced the purely diameter based approach. The proposed predictability method should be further tested in longitudinal studies.

A Fully Automatic Pipeline of Identification, Segmentation, and Subtyping of Aortic Dissection from CT Angiography.

Zhuang C, Wu Y, Qi Q, Zhao S, Sun Y, Hou J, Qian W, Yang B, Qi S

pubmed logopapersJun 6 2025
Aortic dissection (AD) is a rare condition with a high mortality rate, necessitating accurate and rapid diagnosis. This study develops an automated deep learning pipeline for identifying, segmenting, and Stanford subtyping AD using computed tomography angiography (CTA) images. This pipeline consists of four interconnected modules: aorta segmentation, AD identification, true lumen (TL) and false lumen (FL) segmentation, and Stanford subtyping. In the aorta segmentation module, a 3D full-resolution nnU-Net is trained. The segmented aorta's boundary is extracted using morphological operations and projected from multiple views in the AD identification module. AD identification is then performed using the multi-view projection data. For AD cases, a 3D nnU-Net is further trained for TL/FL segmentation based on the segmented aorta. Finally, a network is trained for Stanford subtyping using multi-view maximum density projections of the segmented TL/FL. A total of 386 CTA scans were collected for training, validation, and testing of the pipeline. For AD identification, the method achieved an accuracy of 0.979. The TL/FL segmentation for TypeA-AD and Type-B-AD achieved average Dice coefficient of 0.968 for TL and 0.971 for FL. For Stanford subtyping, the multi-view method achieved an accuracy of 0.990. The automated pipeline enables rapid and accurate identification, segmentation, and Stanford subtyping of AD using CTA images, potentially accelerating the diagnosis and treatment. The segmented aorta and TL/FL can also serve as references for physicians. The code, models, and pipeline are publicly available at https://github.com/zhuangCJ/A-pipeline-of-AD.git .

Predictive Model for the Detection of Subclinical Atherosclerosis in HIV Patients on Antiretroviral Treatment.

Gálvez-Barrón C, Gamarra-Calvo S, Blanco Ramos JR, Sanjoaquín Conde I, Pérez-López C, Miñarro A, Verdejo-Muñoz G

pubmed logopapersJun 5 2025
Patients living with HIV (PLHIV) have a higher cardiovascular risk than others, which is why the early detection of atherosclerosis in this population is important. The present study reports predictive models of subclinical atherosclerosis for this population of patients, made up of variables that are easily collected in the clinic. The study design is a cross-sectional observational study. PLHIV without established cardiovascular disease were recruited for this study. Predictive models of subclinical atherosclerosis (Doppler ultrasound) were developed by testing sociodemographic variables, pathological history, data related to HIV infection, laboratory parameters, and capillaroscopy as potential predictors. Logistic regression with internal validation (bootstrapping) and machine learning techniques were used to develop the models. Data from 96 HIV patients were analysed, 19 (19.8%) of whom had subclinical atherosclerosis. The predictors that went into both machine learning models and the regression model were hypertension, dyslipidaemia, protease inhibitors, triglycerides, fibrinogen, and alkaline phosphatase. Age and C-reactive protein were also part of the machine learning models. The logistic regression model had an area under the receiver operating characteristic curve (AUC) of 0.91 (95% CI: 0.84-0.99), which became 0.80 after internal validation by bootstrapping. The ma-chine learning techniques produced models with AUCs ranging from 0.73 to 0.86. We report predictive models for subclinical atherosclerosis in PLHIV, demonstrating relevant predictive performance based on easily accessible parameters, making them potentially useful as a screening tool. However, given the study's limitations-primarily the sample size-external validation in larger cohorts is warranted.

Research on ischemic stroke risk assessment based on CTA radiomics and machine learning.

Li ZL, Yang HY, Lv XX, Zhang YK, Zhu XY, Zhang YR, Guo L

pubmed logopapersJun 5 2025
The study explores the value of a model constructed by integrating CTA-based carotid plaque radiomic features, clinical risk factors, and plaque imaging characteristics for prognosticating the risk of ischemic stroke. Data from 123 patients with carotid atherosclerosis were analyzed and divided into stroke and asymptomatic groups based on DWI findings. Clinical information was collected, and plaque imaging characteristics were assessed to construct a traditional model. Radiomic features of carotid plaques were extracted using 3D-Slicer software to build a radiomics model. Logistic regression was applied in the training set to establish the traditional model, the radiomics model, and a combined model, which were then tested in the validation set. The prognostic ability of the three models for ischemic stroke was evaluated using ROC curves, while calibration curves, decision curve analysis, and clinical impact curves were used to assess the clinical utility of the models. Differences in AUC values between models were compared using the DeLong test. Hypertension, diabetes, elevated homocysteine (Hcy) concentrations, and plaque burden are independent risk factors for ischemic stroke and were used to establish the traditional model. Through Lasso regression, nine optimal features were selected to construct the radiomics model. ROC curve analysis showed that the AUC values of the three Logistic regression models were 0.766, 0.766, and 0.878 in the training set, and 0.798, 0.801, and 0.847 in the validation set. Calibration curves and decision curve analysis showed that the radiomics model and the combined model had higher accuracy and better fit in prognosticating the risk of ischemic stroke. The radiomics model is slightly better than the traditional model in evaluating the risk of ischemic stroke, while the combined model has the best prognostic performance.

Validation study comparing Artificial intelligence for fully automatic aortic aneurysms Segmentation and diameter Measurements On contrast and non-contrast enhanced computed Tomography (ASMOT).

Gatinot A, Caradu C, Stephan L, Foret T, Rinckenbach S

pubmed logopapersJun 4 2025
Accurate aortic diameter measurements are essential for diagnosis, surveillance, and procedural planning in aortic disease. Semi-automatic methods remain widely used but require manual corrections, which can be time-consuming and operator-dependent. Artificial intelligence (AI)-driven fully automatic methods may offer improved efficiency and measurement accuracy. This study aims to validate a fully automatic method against a semi-automatic approach using computed tomography angiography (CTA) and non-contrast CT scans. A monocentric retrospective comparative study was conducted on patients who underwent endovascular aortic repair (EVAR) for infrarenal, juxta-renal or thoracic aneurysms and a control group. Maximum aortic wall-to-wall diameters were measured before and after repair using a fully automatic software (PRAEVAorta2®, Nurea, Bordeaux, France) and compared to measurements performed by two vascular surgeons using a semi-automatic approach on CTA and non-contrast CT scans. Correlation coefficients (Pearson's R) and absolute differences were calculated to assess agreement. A total of 120 CT scans (60 CTA and 60 non-contrast CT) were included, comprising 23 EVAR, 4 thoracic EVAR, 1 fenestrated EVAR, and 4 control cases. Strong correlations were observed between the fully automatic and semi-automatic measurements in both CTA and non-contrast CT. For CTA, correlation coefficients ranged from 0.94 to 0.96 (R<sup>2</sup> = 0.88-0.92), while for non-contrast CT, they ranged from 0.87 to 0.89 (R<sup>2</sup> = 0.76-0.79). Median absolute differences in aortic diameter measurements varied between 1.1 mm and 4.2 mm across the different anatomical locations. The fully automatic method demonstrated a significantly faster processing time, with a median execution time of 73 seconds (IQR: 57-91) compared to 700 (IQR: 613-800) for the semi-automatic method (p < 0.001). The fully automatic method demonstrated strong agreement with semi-automatic measurements for both CTA and non-contrast CT, before and after endovascular repair in different aortic locations, with significantly reduced analysis time. This method could improve workflow efficiency in clinical practice and research applications.

Deep learning-based automatic segmentation of arterial vessel walls and plaques in MR vessel wall images for quantitative assessment.

Yang L, Yang X, Gong Z, Mao Y, Lu SS, Zhu C, Wan L, Huang J, Mohd Noor MH, Wu K, Li C, Cheng G, Li Y, Liang D, Liu X, Zheng H, Hu Z, Zhang N

pubmed logopapersJun 3 2025
To develop and validate a deep-learning-based automatic method for vessel walls and atherosclerotic plaques segmentation for quantitative evaluation in MR vessel wall images. A total of 193 patients (107 patients for training and validation, 39 patients for internal test, 47 patients for external test) with atherosclerotic plaque from five centers underwent T1-weighted MRI scans and were included in the dataset. The first step of the proposed method was constructing a purely learning-based convolutional neural network (CNN) named Vessel-SegNet to segment the lumen and the vessel wall. The second step is using the vessel wall priors (including manual prior and Tversky-loss-based automatic prior) to improve the plaque segmentation, which utilizes the morphological similarity between the vessel wall and the plaque. The Dice similarity coefficient (DSC), intraclass correlation coefficient (ICC), etc., were used to evaluate the similarity, agreement, and correlations. Most of the DSCs for lumen and vessel wall segmentation were above 90%. The introduction of vessel wall priors can increase the DSC for plaque segmentation by over 10%, reaching 88.45%. Compared to dice-loss-based vessel wall priors, the Tversky-loss-based priors can further improve DSC by nearly 3%, reaching 82.84%. Most of the ICC values between the Vessel-SegNet and manual methods in the 6 quantitative measurements are greater than 85% (p-value < 0.001). The proposed CNN-based segmentation model can quickly and accurately segment vessel walls and plaques for quantitative evaluation. Due to the lack of testing with other equipment, populations, and anatomical studies, the reliability of the research results still requires further exploration. Question How can the accuracy and efficiency of vessel component segmentation for quantification, including the lumen, vessel wall, and plaque, be improved? Findings Improved CNN models, manual/automatic vessel wall priors, and Tversky loss can improve the performance of semi-automatic/automatic vessel components segmentation for quantification. Clinical relevance Manual segmentation of vessel components is a time-consuming yet important process. Rapid and accurate segmentation of the lumen, vessel walls, and plaques for quantification assessment helps patients obtain more accurate, efficient, and timely stroke risk assessments and clinical recommendations.

Predicting long-term patency of radiocephalic arteriovenous fistulas with machine learning and the PREDICT-AVF web app.

Fitzgibbon JJ, Ruan M, Heindel P, Appah-Sampong A, Dey T, Khan A, Hentschel DM, Ozaki CK, Hussain MA

pubmed logopapersJun 1 2025
The goal of this study was to expand our previously created prediction tool (PREDICT-AVF) and web app by estimating long-term primary and secondary patency of radiocephalic AVFs. The data source was 911 patients from PATENCY-1 and PATENCY-2 randomized controlled trials, which enrolled patients undergoing new radiocephalic AVF creation with prospective longitudinal follow up and ultrasound measurements. Models were built using a combination of baseline characteristics and post-operative ultrasound measurements to estimate patency up to 2.5 years. Discrimination performance was assessed, and an interactive web app was created using the most robust model. At 2.5 years, the unadjusted primary and secondary patency (95% CI) was 29% (26-33%) and 68% (65-72%). Models using baseline characteristics generally did not perform as well as those using post-operative ultrasound measurements. Overall, the Cox model (4-6 weeks ultrasound) had the best discrimination performance for primary and secondary patency, with an integrated Brier score of 0.183 (0.167, 0.199) and 0.106 (0.085, 0.126). Expansion of the PREDICT-AVF web app to include prediction of long-term patency can help guide clinicians in developing comprehensive end-stage kidney disease Life-Plans with hemodialysis access patients.

Fully automated image quality assessment based on deep learning for carotid computed tomography angiography: A multicenter study.

Fu W, Ma Z, Yang Z, Yu S, Zhang Y, Zhang X, Mei B, Meng Y, Ma C, Gong X

pubmed logopapersJun 1 2025
To develop and evaluate the performance of fully automated model based on deep learning and multiple logistics regression algorithm for image quality assessment (IQA) of carotid computed tomography angiography (CTA) images. This study retrospectively collected 840 carotid CTA images from four tertiary hospitals. Three radiologists independently assessed the image quality using a 3-point Likert scale, based on the degree of noise, vessel enhancement, arterial vessel contrast, vessel edge sharpness, and overall diagnostic acceptability. An automated assessment model was developed using a training dataset consisting of 600 carotid CTA images. The assessment steps included: (i) selection of objective representative slices; (ii) use of 3D Res U-net approach to extract objective indices from the representative slices and (iii) use of single objective index and multiple indices combinedly to develop logistic regression models for IQA. In the internal and external test datasets (n = 240), the performance of models was evaluated using sensitivity, specificity, precision, F-score, accuracy, the area under the receiver operating characteristic curve (AUC), and the IQA results of models was compared with radiologists' consensus. The representative slices were determined based on the same length model. The performance of multi-index model was excellent in internal and external test datasets with AUCs of 0.98 and 0.97. And the consistency between model and radiologists achieved 91.8% (95% CI: 87.0-96.5) and 92.6% (95 % CI: 86.9-98.4) in internal and external test datasets respectively. The fully automated multi-index model showed equivalent performance to the subjective perceptions of radiologists with greater efficiency for IQA.

tUbe net: a generalisable deep learning tool for 3D vessel segmentation

Holroyd, N. A., Li, Z., Walsh, C., Brown, E. E., Shipley, R. J., Walker-Samuel, S.

biorxiv logopreprintMay 26 2025
Deep learning has become an invaluable tool for bioimage analysis but, while open-source cell annotation software such as cellpose are widely used, an equivalent tool for three-dimensional (3D) vascular annotation does not exist. With the vascular system being directly impacted by a broad range of diseases, there is significant medical interest in quantitative analysis for vascular imaging. However, existing deep learning approaches for this task are specialised to particular tissue types or imaging modalities. We present a new deep learning model for segmentation of vasculature that is generalisable across tissues, modalities, scales and pathologies. To create a generalisable model, a 3D convolutional neural network was trained using data from multiple modalities including optical imaging, computational tomography and photoacoustic imaging. Through this varied training set, the model was forced to learn common features of vessels cross-modality and scale. Following this, the general model was fine-tuned to different applications with a minimal amount of manually labelled ground truth data. It was found that the general model could be specialised to segment new datasets, with a high degree of accuracy, using as little as 0.3% of the volume of that dataset for fine-tuning. As such, this model enables users to produce accurate segmentations of 3D vascular networks without the need to label large amounts of training data.
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