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Polygenic risk scores for rheumatoid arthritis and idiopathic pulmonary fibrosis and associations with RA, interstitial lung abnormalities, and quantitative interstitial abnormalities among smokers.

McDermott GC, Moll M, Cho MH, Hayashi K, Juge PA, Doyle TJ, Paudel ML, Kinney GL, Kronzer VL, Kim JS, O'Keeffe LA, Davis NA, Bernstein EJ, Dellaripa PF, Regan EA, Hunninghake GM, Silverman EK, Ash SY, San Jose Estepar R, Washko GR, Sparks JA

pubmed logopapersJun 1 2025
Genome-wide association studies (GWAS) facilitate construction of polygenic risk scores (PRSs) for rheumatoid arthritis (RA) and idiopathic pulmonary fibrosis (IPF). We investigated associations of RA and IPF PRSs with RA and high-resolution chest computed tomography (HRCT) parenchymal lung abnormalities. Participants in COPDGene, a prospective multicenter cohort of current/former smokers, had chest HRCT at study enrollment. Using genome-wide genotyping, RA and IPF PRSs were constructed using GWAS summary statistics. HRCT imaging underwent visual inspection for interstitial lung abnormalities (ILA) and quantitative CT (QCT) analysis using a machine-learning algorithm that quantified percentage of normal lung, interstitial abnormalities, and emphysema. RA was identified through self-report and DMARD use. We investigated associations of RA and IPF PRSs with RA, ILA, and QCT features using multivariable logistic and linear regression. We analyzed 9,230 COPDGene participants (mean age 59.6 years, 46.4 % female, 67.2 % non-Hispanic White, 32.8 % Black/African American). In non-Hispanic White participants, RA PRS was associated with RA diagnosis (OR 1.32 per unit, 95 %CI 1.18-1.49) but not ILA or QCT features. Among non-Hispanic White participants, IPF PRS was associated with ILA (OR 1.88 per unit, 95 %CI 1.52-2.32) and quantitative interstitial abnormalities (adjusted β=+0.50 % per unit, p = 7.3 × 10<sup>-8</sup>) but not RA. There were no statistically significant associations among Black/African American participants. RA and IPF PRSs were associated with their intended phenotypes among non-Hispanic White participants but performed poorly among Black/African American participants. PRS may have future application to risk stratify for RA diagnosis among patients with ILD or for ILD among patients with RA.

A scoping review on the integration of artificial intelligence in point-of-care ultrasound: Current clinical applications.

Kim J, Maranna S, Watson C, Parange N

pubmed logopapersJun 1 2025
Artificial intelligence (AI) is used increasingly in point-of-care ultrasound (POCUS). However, the true role, utility, advantages, and limitations of AI tools in POCUS have been poorly understood. to conduct a scoping review on the current literature of AI in POCUS to identify (1) how AI is being applied in POCUS, and (2) how AI in POCUS could be utilized in clinical settings. The review followed the JBI scoping review methodology. A search strategy was conducted in Medline, Embase, Emcare, Scopus, Web of Science, Google Scholar, and AI POCUS manufacturer websites. Selection criteria, evidence screening, and selection were performed in Covidence. Data extraction and analysis were performed on Microsoft Excel by the primary investigator and confirmed by the secondary investigators. Thirty-three papers were included. AI POCUS on the cardiopulmonary region was the most prominent in the literature. AI was most frequently used to automatically measure biometry using POCUS images. AI POCUS was most used in acute settings. However, novel applications in non-acute and low-resource settings were also explored. AI had the potential to increase POCUS accessibility and usability, expedited care and management, and had a reasonably high diagnostic accuracy in limited applications such as measurement of Left Ventricular Ejection Fraction, Inferior Vena Cava Collapsibility Index, Left-Ventricular Outflow Tract Velocity Time Integral and identifying B-lines of the lung. However, AI could not interpret poor images, underperformed compared to standard-of-care diagnostic methods, and was less effective in patients with specific disease states, such as severe illnesses that limit POCUS image acquisition. This review uncovered the applications of AI in POCUS and the advantages and limitations of AI POCUS in different clinical settings. Future research in the field must first establish the diagnostic accuracy of AI POCUS tools and explore their clinical utility through clinical trials.

EMI-LTI: An enhanced integrated model for lung tumor identification using Gabor filter and ROI.

J J, Haw SC, Palanichamy N, Ng KW, Aneja M, Taiyab A

pubmed logopapersJun 1 2025
In this work, the CT scans images of lung cancer patients are analysed to diagnose the disease at its early stage. The images are pre-processed using a series of steps such as the Gabor filter, contours to label the region of interest (ROI), increasing the sharpening and cropping of the image. Data augmentation is employed on the pre-processed images using two proposed architectures, namely (1) Convolutional Neural Network (CNN) and (2) Enhanced Integrated model for Lung Tumor Identification (EIM-LTI).•In this study, comparisons are made on non-pre-processed data, Haar and Gabor filters in CNN and the EIM-LTI models. The performance of the CNN and EIM-LTI models is evaluated through metrics such as precision, sensitivity, F1-score, specificity, training and validation accuracy.•The EIM-LTI model's training accuracy is 2.67 % higher than CNN, while its validation accuracy is 2.7 % higher. Additionally, the EIM-LTI model's validation loss is 0.0333 higher than CNN's.•In this study, a comparative analysis of model accuracies for lung cancer detection is performed. Cross-validation with 5 folds achieves an accuracy of 98.27 %, and the model was evaluated on unseen data and resulted in 92 % accuracy.

Does the deep learning-based iterative reconstruction affect the measuring accuracy of bone mineral density in low-dose chest CT?

Hao H, Tong J, Xu S, Wang J, Ding N, Liu Z, Zhao W, Huang X, Li Y, Jin C, Yang J

pubmed logopapersJun 1 2025
To investigate the impacts of a deep learning-based iterative reconstruction algorithm on image quality and measuring accuracy of bone mineral density (BMD) in low-dose chest CT. Phantom and patient studies were separately conducted in this study. The same low-dose protocol was used for phantoms and patients. All images were reconstructed with filtered back projection, hybrid iterative reconstruction (HIR) (KARL®, level of 3,5,7), and deep learning-based iterative reconstruction (artificial intelligence iterative reconstruction [AIIR], low, medium, and high strength). The noise power spectrum (NPS) and the task-based transfer function (TTF) were evaluated using phantom. The accuracy and the relative error (RE) of BMD were evaluated using a European spine phantom. The subjective evaluation was performed by 2 experienced radiologists. BMD was measured using quantitative CT (QCT). Image noise, signal-to-noise ratio (SNR), contrast-to-noise ratio (CNR), BMD values, and subjective scores were compared with Wilcoxon signed-rank test. The Cohen's kappa test was used to evaluate the inter-reader and inter-group agreement. AIIR reduced noise and improved resolution on phantom images significantly. There were no significant differences among BMD values in all groups of images (all P > 0.05). RE of BMD measured using AIIR images was smaller. In objective evaluation, all strengths of AIIR achieved less image noise and higher SNR and CNR (all P < 0.05). AIIR-H showed the lowest noise and highest SNR and CNR (P < 0.05). The increase in AIIR algorithm strengths did not affect BMD values significantly (all P > 0.05). The deep learning-based iterative reconstruction did not affect the accuracy of BMD measurement in low-dose chest CT while reducing image noise and improving spatial resolution. The BMD values could be measured accurately in low-dose chest CT with deep learning-based iterative reconstruction while reducing image noise and improving spatial resolution.

Accuracy of a deep neural network for automated pulmonary embolism detection on dedicated CT pulmonary angiograms.

Zsarnoczay E, Rapaka S, Schoepf UJ, Gnasso C, Vecsey-Nagy M, Todoran TM, Hagar MT, Kravchenko D, Tremamunno G, Griffith JP, Fink N, Derrick S, Bowman M, Sam H, Tiller M, Godoy K, Condrea F, Sharma P, O'Doherty J, Maurovich-Horvat P, Emrich T, Varga-Szemes A

pubmed logopapersJun 1 2025
To assess the performance of a Deep Neural Network (DNN)-based prototype algorithm for automated PE detection on CTPA scans. Patients who had previously undergone CTPA with three different systems (SOMATOM Force, go.Top, and Definition AS; Siemens Healthineers, Forchheim, Germany) because of suspected PE from September 2022 to January 2023 were retrospectively enrolled in this study (n = 1,000, 58.8 % women). For detailed evaluation, all PE were divided into three location-based subgroups: central arteries, lobar branches, and peripheral regions. Clinical reports served as ground truth. Sensitivity, specificity, positive predictive value (PPV), negative predictive value (NPV), and accuracy were determined to evaluate the performance of DNN-based PE detection. Cases were excluded due to incomplete data (n = 32), inconclusive report (n = 17), insufficient contrast detected in the pulmonary trunk (n = 40), or failure of the preprocessing algorithms (n = 8). Therefore, the final cohort included 903 cases with a PE prevalence of 12 % (n = 110). The model achieved a sensitivity, specificity, PPV, and NPV of 84.6, 95.1, 70.5, and 97.8 %, respectively, and delivered an overall accuracy of 93.8 %. Among the false positive cases (n = 39), common sources of error included lung masses, pneumonia, and contrast flow artifacts. Common sources of false negatives (n = 17) included chronic and subsegmental PEs. The proposed DNN-based algorithm provides excellent performance for the detection of PE, suggesting its potential utility to support radiologists in clinical reading and exam prioritization.

Detection of COVID-19, lung opacity, and viral pneumonia via X-ray using machine learning and deep learning.

Lamouadene H, El Kassaoui M, El Yadari M, El Kenz A, Benyoussef A, El Moutaouakil A, Mounkachi O

pubmed logopapersJun 1 2025
The COVID-19 pandemic has significantly strained healthcare systems, highlighting the need for early diagnosis to isolate positive cases and prevent the spread. This study combines machine learning, deep learning, and transfer learning techniques to automatically diagnose COVID-19 and other pulmonary conditions from radiographic images. First, we used Convolutional Neural Networks (CNNs) and a Support Vector Machine (SVM) classifier on a dataset of 21,165 chest X-ray images. Our model achieved an accuracy of 86.18 %. This approach aids medical experts in rapidly and accurateky detecting lung diseases. Next, we applied transfer learning using ResNet18 combined with SVM on a dataset comprising normal, COVID-19, lung opacity, and viral pneumonia images. This model outperformed traditional methods, with classification rates of 98 % with Stochastic Gradient Descent (SGD), 97 % with Adam, 96 % with RMSProp, and 94 % with Adagrad optimizers. Additionally, we incorporated two additional transfer learning models, EfficientNet-CNN and Xception-CNN, which achieved classification accuracies of 99.20 % and 98.80 %, respectively. However, we observed limitations in dataset diversity and representativeness, which may affect model generalization. Future work will focus on implementing advanced data augmentation techniques and collaborations with medical experts to enhance model performance.This research demonstrates the potential of cutting-edge deep learning techniques to improve diagnostic accuracy and efficiency in medical imaging applications.

A computed tomography-based deep learning radiomics model for predicting the gender-age-physiology stage of patients with connective tissue disease-associated interstitial lung disease.

Long B, Li R, Wang R, Yin A, Zhuang Z, Jing Y, E L

pubmed logopapersJun 1 2025
To explore the feasibility of using a diagnostic model constructed with deep learning-radiomics (DLR) features extracted from chest computed tomography (CT) images to predict the gender-age-physiology (GAP) stage of patients with connective tissue disease-associated interstitial lung disease (CTD-ILD). The data of 264 CTD-ILD patients were retrospectively collected. GAP Stage I, II, III patients are 195, 56, 13 cases respectively. The latter two stages were combined into one group. The patients were randomized into a training set and a validation set. Single-input models were separately constructed using the selected radiomics and DL features, while DLR model was constructed from both sets of features. For all models, the support vector machine (SVM) and logistic regression (LR) algorithms were used for construction. The nomogram models were generated by integrating age, gender, and DLR features. The DLR model outperformed the radiomics and DL models in both the training set and the validation set. The predictive performance of the DLR model based on the LR algorithm was the best among all the feature-based models (AUC = 0.923). The comprehensive models had even greater performance in predicting the GAP stage of CTD-ILD patients. The comprehensive model using the SVM algorithm had the best performance of the two models (AUC = 0.951). The DLR model extracted from CT images can assist in the clinical prediction of the GAP stage of CTD-ILD patients. A nomogram showed even greater performance in predicting the GAP stage of CTD-ILD patients.

Early-stage lung cancer detection via thin-section low-dose CT reconstruction combined with AI in non-high risk populations: a large-scale real-world retrospective cohort study.

Ji G, Luo W, Zhu Y, Chen B, Wang M, Jiang L, Yang M, Song W, Yao P, Zheng T, Yu H, Zhang R, Wang C, Ding R, Zhuo X, Chen F, Li J, Tang X, Xian J, Song T, Tang J, Feng M, Shao J, Li W

pubmed logopapersJun 1 2025
Current lung cancer screening guidelines recommend annual low-dose computed tomography (LDCT) for high-risk individuals. However, the effectiveness of LDCT in non-high-risk individuals remains inadequately explored. With the incidence of lung cancer steadily increasing among non-high-risk individuals, this study aims to assess the risk of lung cancer in non-high-risk individuals and evaluate the potential of thin-section LDCT reconstruction combined with artificial intelligence (LDCT-TRAI) as a screening tool. A real-world cohort study on lung cancer screening was conducted at the West China Hospital of Sichuan University from January 2010 to July 2021. Participants were screened using either LDCT-TRAI or traditional thick-section LDCT without AI (traditional LDCT) . The AI system employed was the uAI-ChestCare software. Lung cancer diagnoses were confirmed through pathological examination. Among the 259 121 enrolled non-high-risk participants, 87 260 (33.7%) had positive screening results. Within 1 year, 728 (0.3%) participants were diagnosed with lung cancer, of whom 87.1% (634/728) were never-smokers, and 92.7% (675/728) presented with stage I disease. Compared with traditional LDCT, LDCT-TRAI demonstrated a higher lung cancer detection rate (0.3% vs. 0.2%, <i>P</i> < 0.001), particularly for stage I cancers (94.4% vs. 83.2%, <i>P</i> < 0.001), and was associated with improved survival outcomes (5-year overall survival rate: 95.4% vs. 81.3%, <i>P</i> < 0.0001). These findings highlight the importance of expanding lung cancer screening to non-high-risk populations, especially never-smokers. LDCT-TRAI outperformed traditional LDCT in detecting early-stage cancers and improving survival outcomes, underscoring its potential as a more effective screening tool for early lung cancer detection in this population.

Automated engineered-stone silicosis screening and staging using Deep Learning with X-rays.

Priego-Torres B, Sanchez-Morillo D, Khalili E, Conde-Sánchez MÁ, García-Gámez A, León-Jiménez A

pubmed logopapersJun 1 2025
Silicosis, a debilitating occupational lung disease caused by inhaling crystalline silica, continues to be a significant global health issue, especially with the increasing use of engineered stone (ES) surfaces containing high silica content. Traditional diagnostic methods, dependent on radiological interpretation, have low sensitivity, especially, in the early stages of the disease, and present variability between evaluators. This study explores the efficacy of deep learning techniques in automating the screening and staging of silicosis using chest X-ray images. Utilizing a comprehensive dataset, obtained from the medical records of a cohort of workers exposed to artificial quartz conglomerates, we implemented a preprocessing stage for rib-cage segmentation, followed by classification using state-of-the-art deep learning models. The segmentation model exhibited high precision, ensuring accurate identification of thoracic structures. In the screening phase, our models achieved near-perfect accuracy, with ROC AUC values reaching 1.0, effectively distinguishing between healthy individuals and those with silicosis. The models demonstrated remarkable precision in the staging of the disease. Nevertheless, differentiating between simple silicosis and progressive massive fibrosis, the evolved and complicated form of the disease, presented certain difficulties, especially during the transitional period, when assessment can be significantly subjective. Notwithstanding these difficulties, the models achieved an accuracy of around 81% and ROC AUC scores nearing 0.93. This study highlights the potential of deep learning to generate clinical decision support tools to increase the accuracy and effectiveness in the diagnosis and staging of silicosis, whose early detection would allow the patient to be moved away from all sources of occupational exposure, therefore constituting a substantial advancement in occupational health diagnostics.

Pediatric chest X-ray diagnosis using neuromorphic models.

Bokhari SM, Sohaib S, Shafi M

pubmed logopapersJun 1 2025
This research presents an innovative neuromorphic method utilizing Spiking Neural Networks (SNNs) to analyze pediatric chest X-rays (PediCXR) to identify prevalent thoracic illnesses. We incorporate spiking-based machine learning models such as Spiking Convolutional Neural Networks (SCNN), Spiking Residual Networks (S-ResNet), and Hierarchical Spiking Neural Networks (HSNN), for pediatric chest radiographic analysis utilizing the publically available benchmark PediCXR dataset. These models employ spatiotemporal feature extraction, residual connections, and event-driven processing to improve diagnostic precision. The HSNN model surpasses benchmark approaches from the literature, with a classification accuracy of 96% across six thoracic illness categories, with an F1-score of 0.95 and a specificity of 1.0 in pneumonia detection. Our research demonstrates that neuromorphic computing is a feasible and biologically inspired approach to real-time medical imaging diagnostics, significantly improving performance.
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