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IM- LTS: An Integrated Model for Lung Tumor Segmentation using Neural Networks and IoMT.

J J, Haw SC, Palanichamy N, Ng KW, Thillaigovindhan SK

pubmed logopapersJun 1 2025
In recent days, Internet of Medical Things (IoMT) and Deep Learning (DL) techniques are broadly used in medical data processing in decision-making. A lung tumour, one of the most dangerous medical diseases, requires early diagnosis with a higher precision rate. With that concern, this work aims to develop an Integrated Model (IM- LTS) for Lung Tumor Segmentation using Neural Networks (NN) and the Internet of Medical Things (IoMT). The model integrates two architectures, MobileNetV2 and U-NET, for classifying the input lung data. The input CT lung images are pre-processed using Z-score Normalization. The semantic features of lung images are extracted based on texture, intensity, and shape to provide information to the training network.•In this work, the transfer learning technique is incorporated, and the pre-trained NN was used as an encoder for the U-NET model for segmentation. Furthermore, Support Vector Machine is used here to classify input lung data as benign and malignant.•The results are measured based on the metrics such as, specificity, sensitivity, precision, accuracy and F-Score, using the data from benchmark datasets. Compared to the existing lung tumor segmentation and classification models, the proposed model provides better results and evidence for earlier disease diagnosis.

TTGA U-Net: Two-stage two-stream graph attention U-Net for hepatic vessel connectivity enhancement.

Zhao Z, Li W, Ding X, Sun J, Xu LX

pubmed logopapersJun 1 2025
Accurate segmentation of hepatic vessels is pivotal for guiding preoperative planning in ablation surgery utilizing CT images. While non-contrast CT images often lack observable vessels, we focus on segmenting hepatic vessels within preoperative MR images. However, the vascular structures depicted in MR images are susceptible to noise, leading to challenges in connectivity. To address this issue, we propose a two-stage two-stream graph attention U-Net (i.e., TTGA U-Net) for hepatic vessel segmentation. Specifically, the first-stage network employs a CNN or Transformer-based architecture to preliminarily locate the vessel position, followed by an improved superpixel segmentation method to generate graph structures based on the positioning results. The second-stage network extracts graph node features through two parallel branches of a graph spatial attention network (GAT) and a graph channel attention network (GCT), employing self-attention mechanisms to balance these features. The graph pooling operation is utilized to aggregate node information. Moreover, we introduce a feature fusion module instead of skip connections to merge the two graph attention features, providing additional information to the decoder effectively. We establish a novel well-annotated high-quality MR image dataset for hepatic vessel segmentation and validate the vessel connectivity enhancement network's effectiveness on this dataset and the public dataset 3D IRCADB. Experimental results demonstrate that our TTGA U-Net outperforms state-of-the-art methods, notably enhancing vessel connectivity.

Changes of Pericoronary Adipose Tissue in Stable Heart Transplantation Recipients and Comparison with Controls.

Yang J, Chen L, Yu J, Chen J, Shi J, Dong N, Yu F, Shi H

pubmed logopapersJun 1 2025
Pericoronary adipose tissue (PCAT) is a key cardiovascular risk biomarker, yet its temporal changes after heart transplantation (HT) and comparison with controls remain unclear. This study investigates the temporal changes of PCAT in stable HT recipients and compares it to controls. In this study, we analyzed 159 stable HT recipients alongside two control groups. Both control groups were matched to a subgroup of HT recipients who did not have coronary artery stenosis. Group 1 consisted of 60 individuals matched for age, sex, and body mass index (BMI), with no history of hypertension, diabetes, hyperlipidemia, or smoking. Group 2 included 56 individuals additionally matched for hypertension, diabetes, hyperlipidemia, and smoking history. PCAT volume and fat attenuation index (FAI) were measured using AI-based software. Temporal changes in PCAT were assessed at multiple time points in HT recipients, and PCAT in the subgroup of HT recipients without coronary stenosis was compared to controls. Stable HT recipients exhibited a progressive decrease in FAI and an increase in PCAT volume over time, particularly in the first five years post-HT. Similar trends were observed in the subgroup of HT recipients without coronary stenosis. Compared to controls, PCAT FAI was significantly higher in the HT subgroup during the first five years post-HT (P < 0.001). After five years, differences persisted but diminished, with no statistically significant differences observed in the PCAT of left anterior descending artery (LAD) (P > 0.05). A negative correlation was observed between FAI and PCAT volume post-HT (r = - 0.75 ∼ - 0.53). PCAT volume and FAI undergo temporal changes in stable HT recipients, especially during the first five years post-HT. Even in HT recipients without coronary stenosis, PCAT FAI differs from controls, indicating distinct changes in this cohort.

A Dual-Energy Computed Tomography Guided Intelligent Radiation Therapy Platform.

Wen N, Zhang Y, Zhang H, Zhang M, Zhou J, Liu Y, Liao C, Jia L, Zhang K, Chen J

pubmed logopapersJun 1 2025
The integration of advanced imaging and artificial intelligence technologies in radiation therapy has revolutionized cancer treatment by enhancing precision and adaptability. This study introduces a novel dual-energy computed tomography (DECT) guided intelligent radiation therapy (DEIT) platform designed to streamline and optimize the radiation therapy process. The DEIT system combines DECT, a newly designed dual-layer multileaf collimator, deep learning algorithms for auto-segmentation, and automated planning and quality assurance capabilities. The DEIT system integrates an 80-slice computed tomography (CT) scanner with an 87 cm bore size, a linear accelerator delivering 4 photon and 5 electron energies, and a flat panel imager optimized for megavoltage (MV) cone beam CT acquisition. A comprehensive evaluation of the system's accuracy was conducted using end-to-end tests. Virtual monoenergetic CT images and electron density images of the DECT were generated and compared on both phantom and patient. The system's auto-segmentation algorithms were tested on 5 cases for each of the 99 organs at risk, and the automated optimization and planning capabilities were evaluated on clinical cases. The DEIT system demonstrated systematic errors of less than 1 mm for target localization. DECT reconstruction showed electron density mapping deviations ranging from -0.052 to 0.001, with stable Hounsfield unit consistency across monoenergetic levels above 60 keV, except for high-Z materials at lower energies. Auto-segmentation achieved dice similarity coefficients above 0.9 for most organs with an inference time of less than 2 seconds. Dose-volume histogram comparisons showed improved dose conformity indices and reduced doses to critical structures in auto-plans compared to manual plans across various clinical cases. In addition, high gamma passing rates at 2%/2 mm in both 2-dimensional (above 97%) and 3-dimensional (above 99%) in vivo analyses further validate the accuracy and reliability of treatment plans. The DEIT platform represents a viable solution for radiation treatment. The DEIT system uses artificial intelligence-driven automation, real-time adjustments, and CT imaging to enhance the radiation therapy process, improving efficiency and flexibility.

Automated contouring for breast cancer radiotherapy in the isocentric lateral decubitus position: a neural network-based solution for enhanced precision and efficiency.

Loap P, Monteil R, Kirova Y, Vu-Bezin J

pubmed logopapersJun 1 2025
Adjuvant radiotherapy is essential for reducing local recurrence and improving survival in breast cancer patients, but it carries a risk of ischemic cardiac toxicity, which increases with heart exposure. The isocentric lateral decubitus position, where the breast rests flat on a support, reduces heart exposure and leads to delivery of a more uniform dose. This position is particularly beneficial for patients with unique anatomies, such as those with pectus excavatum or larger breast sizes. While artificial intelligence (AI) algorithms for autocontouring have shown promise, they have not been tailored to this specific position. This study aimed to develop and evaluate a neural network-based autocontouring algorithm for patients treated in the isocentric lateral decubitus position. In this single-center study, 1189 breast cancer patients treated after breast-conserving surgery were included. Their simulation CT scans (1209 scans) were used to train and validate a neural network-based autocontouring algorithm (nnU-Net). Of these, 1087 scans were used for training, and 122 scans were reserved for validation. The algorithm's performance was assessed using the Dice similarity coefficient (DSC) to compare the automatically delineated volumes with manual contours. A clinical evaluation of the algorithm was performed on 30 additional patients, with contours rated by two expert radiation oncologists. The neural network-based algorithm achieved a segmentation time of approximately 4 min, compared to 20 min for manual segmentation. The DSC values for the validation cohort were 0.88 for the treated breast, 0.90 for the heart, 0.98 for the right lung, and 0.97 for the left lung. In the clinical evaluation, 90% of the automatically contoured breast volumes were rated as acceptable without corrections, while the remaining 10% required minor adjustments. All lung contours were accepted without corrections, and heart contours were rated as acceptable in 93.3% of cases, with minor corrections needed in 6.6% of cases. This neural network-based autocontouring algorithm offers a practical, time-saving solution for breast cancer radiotherapy planning in the isocentric lateral decubitus position. Its strong geometric performance, clinical acceptability, and significant time efficiency make it a valuable tool for modern radiotherapy practices, particularly in high-volume centers.

A continuous-action deep reinforcement learning-based agent for coronary artery centerline extraction in coronary CT angiography images.

Zhang Y, Luo G, Wang W, Cao S, Dong S, Yu D, Wang X, Wang K

pubmed logopapersJun 1 2025
The lumen centerline of the coronary artery allows vessel reconstruction used to detect stenoses and plaques. Discrete-action-based centerline extraction methods suffer from artifacts and plaques. This study aimed to develop a continuous-action-based method which performs more effectively in cases involving artifacts or plaques. A continuous-action deep reinforcement learning-based model was trained to predict the artery's direction and radius value. The model is based on an Actor-Critic architecture. The Actor learns a deterministic policy to output the actions made by an agent. These actions indicate the centerline's direction and radius value consecutively. The Critic learns a value function to evaluate the quality of the agent's actions. A novel DDR reward was introduced to measure the agent's action (both centerline extraction and radius estimate) at each step. The method achieved an average OV of 95.7%, OF of 93.6%, OT of 97.3%, and AI of 0.22 mm in 80 test data. In 53 cases with artifacts or plaques, it achieved an average OV of 95.0%, OF of 91.5%, OT of 96.7%, and AI of 0.23 mm. The 95% limits of agreement between the reference and estimated radius values were <math xmlns="http://www.w3.org/1998/Math/MathML"><mo>-</mo></math> 0.46 mm and 0.43 mm in the 80 test data. Experiments demonstrate that the Actor-Critic architecture can achieve efficient centerline extraction and radius estimate. Compared with discrete-action-based methods, our method performs more effectively in cases involving artifacts or plaques. The extracted centerlines and radius values allow accurate coronary artery reconstruction that facilitates the detection of stenoses and plaques.

BCT-Net: semantic-guided breast cancer segmentation on BUS.

Xin J, Yu Y, Shen Q, Zhang S, Su N, Wang Z

pubmed logopapersJun 1 2025
Accurately and swiftly segmenting breast tumors is significant for cancer diagnosis and treatment. Ultrasound imaging stands as one of the widely employed methods in clinical practice. However, due to challenges such as low contrast, blurred boundaries, and prevalent shadows in ultrasound images, tumor segmentation remains a daunting task. In this study, we propose BCT-Net, a network amalgamating CNN and transformer components for breast tumor segmentation. BCT-Net integrates a dual-level attention mechanism to capture more features and redefines the skip connection module. We introduce the utilization of a classification task as an auxiliary task to impart additional semantic information to the segmentation network, employing supervised contrastive learning. A hybrid objective loss function is proposed, which combines pixel-wise cross-entropy, binary cross-entropy, and supervised contrastive learning loss. Experimental results demonstrate that BCT-Net achieves high precision, with Pre and DSC indices of 86.12% and 88.70%, respectively. Experiments conducted on the BUSI dataset of breast ultrasound images manifest that this approach exhibits high accuracy in breast tumor segmentation.

Combining Multifrequency Magnetic Resonance Elastography With Automatic Segmentation to Assess Renal Function in Patients With Chronic Kidney Disease.

Liang Q, Lin H, Li J, Luo P, Qi R, Chen Q, Meng F, Qin H, Qu F, Zeng Y, Wang W, Lu J, Huang B, Chen Y

pubmed logopapersJun 1 2025
Multifrequency MR elastography (mMRE) enables noninvasive quantification of renal stiffness in patients with chronic kidney disease (CKD). Manual segmentation of the kidneys on mMRE is time-consuming and prone to increased interobserver variability. To evaluate the performance of mMRE combined with automatic segmentation in assessing CKD severity. Prospective. A total of 179 participants consisting of 95 healthy volunteers and 84 participants with CKD. 3 T, single shot spin echo planar imaging sequence. Participants were randomly assigned into training (n = 58), validation (n = 15), and test (n = 106) sets. Test set included 47 healthy volunteers and 58 CKD participants with different stages (21 stage 1-2, 22 stage 3, and 16 stage 4-5) based on estimated glomerular filtration rate (eGFR). Shear wave speed (SWS) values from mMRE was measured using automatic segmentation constructed through the nnU-Net deep-learning network. Standard manual segmentation was created by a radiologist. In the test set, the automatically segmented renal SWS were compared between healthy volunteers and CKD subgroups, with age as a covariate. The association between SWS and eGFR was investigated in participants with CKD. Dice similarity coefficient (DSC), analysis of covariance, Pearson and Spearman correlation analyses. P < 0.05 was considered statistically significant. Mean DSCs between standard manual and automatic segmentation were 0.943, 0.901, and 0.970 for the renal cortex, medulla, and parenchyma, respectively. The automatically quantified cortical, medullary, and parenchymal SWS were significantly correlated with eGFR (r = 0.620, 0.605, and 0.640, respectively). Participants with CKD stage 1-2 exhibited significantly lower cortical SWS values compared to healthy volunteers (2.44 ± 0.16 m/second vs. 2.56 ± 0.17 m/second), after adjusting age. mMRE combined with automatic segmentation revealed abnormal renal stiffness in patients with CKD, even with mild renal impairment. The renal stiffness of patients with chronic kidney disease varies according to the function and structure of the kidney. This study integrates multifrequency magnetic resonance elastography with automated segmentation technique to assess renal stiffness in patients with chronic kidney disease. The findings indicate that this method is capable of distinguishing between patients with chronic kidney disease, including those with mild renal impairment, while simultaneously reducing the subjectivity and time required for radiologists to analyze images. This research enhances the efficiency of image processing for radiologists and assists nephrologists in detecting early-stage damage in patients with chronic kidney disease. 2 TECHNICAL EFFICACY: Stage 2.

Adaptive ensemble loss and multi-scale attention in breast ultrasound segmentation with UMA-Net.

Dar MF, Ganivada A

pubmed logopapersJun 1 2025
The generalization of deep learning (DL) models is critical for accurate lesion segmentation in breast ultrasound (BUS) images. Traditional DL models often struggle to generalize well due to the high frequency and scale variations inherent in BUS images. Moreover, conventional loss functions used in these models frequently result in imbalanced optimization, either prioritizing region overlap or boundary accuracy, which leads to suboptimal segmentation performance. To address these issues, we propose UMA-Net, an enhanced UNet architecture specifically designed for BUS image segmentation. UMA-Net integrates residual connections, attention mechanisms, and a bottleneck with atrous convolutions to effectively capture multi-scale contextual information without compromising spatial resolution. Additionally, we introduce an adaptive ensemble loss function that dynamically balances the contributions of different loss components during training, ensuring optimization across key segmentation metrics. This novel approach mitigates the imbalances found in conventional loss functions. We validate UMA-Net on five diverse BUS datasets-BUET, BUSI, Mendeley, OMI, and UDIAT-demonstrating superior performance. Our findings highlight the importance of addressing frequency and scale variations, confirming UMA-Net as a robust and generalizable solution for BUS image segmentation.

Semi-Supervised Learning Allows for Improved Segmentation With Reduced Annotations of Brain Metastases Using Multicenter MRI Data.

Ottesen JA, Tong E, Emblem KE, Latysheva A, Zaharchuk G, Bjørnerud A, Grøvik E

pubmed logopapersJun 1 2025
Deep learning-based segmentation of brain metastases relies on large amounts of fully annotated data by domain experts. Semi-supervised learning offers potential efficient methods to improve model performance without excessive annotation burden. This work tests the viability of semi-supervision for brain metastases segmentation. Retrospective. There were 156, 65, 324, and 200 labeled scans from four institutions and 519 unlabeled scans from a single institution. All subjects included in the study had diagnosed with brain metastases. 1.5 T and 3 T, 2D and 3D T1-weighted pre- and post-contrast, and fluid-attenuated inversion recovery (FLAIR). Three semi-supervision methods (mean teacher, cross-pseudo supervision, and interpolation consistency training) were adapted with the U-Net architecture. The three semi-supervised methods were compared to their respective supervised baseline on the full and half-sized training. Evaluation was performed on a multinational test set from four different institutions using 5-fold cross-validation. Method performance was evaluated by the following: the number of false-positive predictions, the number of true positive predictions, the 95th Hausdorff distance, and the Dice similarity coefficient (DSC). Significance was tested using a paired samples t test for a single fold, and across all folds within a given cohort. Semi-supervision outperformed the supervised baseline for all sites with the best-performing semi-supervised method achieved an on average DSC improvement of 6.3% ± 1.6%, 8.2% ± 3.8%, 8.6% ± 2.6%, and 15.4% ± 1.4%, when trained on half the dataset and 3.6% ± 0.7%, 2.0% ± 1.5%, 1.8% ± 5.7%, and 4.7% ± 1.7%, compared to the supervised baseline on four test cohorts. In addition, in three of four datasets, the semi-supervised training produced equal or better results than the supervised models trained on twice the labeled data. Semi-supervised learning allows for improved segmentation performance over the supervised baseline, and the improvement was particularly notable for independent external test sets when trained on small amounts of labeled data. Artificial intelligence requires extensive datasets with large amounts of annotated data from medical experts which can be difficult to acquire due to the large workload. To compensate for this, it is possible to utilize large amounts of un-annotated clinical data in addition to annotated data. However, this method has not been widely tested for the most common intracranial brain tumor, brain metastases. This study shows that this approach allows for data efficient deep learning models across multiple institutions with different clinical protocols and scanners. 3 TECHNICAL EFFICACY: Stage 2.
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