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Multi-Center 3D CNN for Parkinson's disease diagnosis and prognosis using clinical and T1-weighted MRI data.

Basaia S, Sarasso E, Sciancalepore F, Balestrino R, Musicco S, Pisano S, Stankovic I, Tomic A, Micco R, Tessitore A, Salvi M, Meiburger KM, Kostic VS, Molinari F, Agosta F, Filippi M

pubmed logopapersAug 5 2025
Parkinson's disease (PD) presents challenges in early diagnosis and progression prediction. Recent advancements in machine learning, particularly convolutional-neural-networks (CNNs), show promise in enhancing diagnostic accuracy and prognostic capabilities using neuroimaging data. The aims of this study were: (i) develop a 3D-CNN based on MRI to distinguish controls and PD patients and (ii) employ CNN to predict the progression of PD. Three cohorts were selected: 86 mild, 62 moderate-to-severe PD patients, and 60 controls; 14 mild-PD patients and 14 controls from Parkinson's Progression Markers Initiative database, and 38 de novo mild-PD patients and 38 controls. All participants underwent MRI scans and clinical evaluation at baseline and over 2-years. PD subjects were classified in two clusters of different progression using k-means clustering based on baseline and follow-up UDPRS-III scores. A 3D-CNN was built and tested on PD patients and controls, with binary classifications: controls vs moderate-to-severe PD, controls vs mild-PD, and two clusters of PD progression. The effect of transfer learning was also tested. CNN effectively differentiated moderate-to-severe PD from controls (74% accuracy) using MRI data alone. Transfer learning significantly improved performance in distinguishing mild-PD from controls (64% accuracy). For predicting disease progression, the model achieved over 70% accuracy by combining MRI and clinical data. Brain regions most influential in the CNN's decisions were visualized. CNN, integrating multimodal data and transfer learning, provides encouraging results toward early-stage classification and progression monitoring in PD. Its explainability through activation maps offers potential for clinical application in early diagnosis and personalized monitoring.

Automated ultrasound system ARTHUR V.2.0 with AI analysis DIANA V.2.0 matches expert rheumatologist in hand joint assessment of rheumatoid arthritis patients.

Frederiksen BA, Hammer HB, Terslev L, Ammitzbøll-Danielsen M, Savarimuthu TR, Weber ABH, Just SA

pubmed logopapersAug 5 2025
To evaluate the agreement and repeatability of an automated robotic ultrasound system (ARTHUR V.2.0) combined with an AI model (DIANA V.2.0) in assessing synovial hypertrophy (SH) and Doppler activity in rheumatoid arthritis (RA) patients, using an expert rheumatologist's assessment as the reference standard. 30 RA patients underwent two consecutive ARTHUR V.2.0 scans and rheumatologist assessment of 22 hand joints, with the rheumatologist blinded to the automated system's results. Images were scored for SH and Doppler by DIANA V.2.0 using the EULAR-OMERACT scale (0-3). The agreement was evaluated by weighted Cohen's kappa, percent exact agreement (PEA), percent close agreement (PCA) and binary outcomes using Global OMERACT-EULAR Synovitis Scoring (healthy ≤1 vs diseased ≥2). Comparisons included intra-robot repeatability and agreement with the expert rheumatologist and a blinded independent assessor. ARTHUR successfully scanned 564 out of 660 joints, corresponding to an overall success rate of 85.5%. Intra-robot agreement for SH: PEA 63.0%, PCA 93.0%, binary 90.5% and for Doppler, PEA 74.8%, PCA 93.7%, binary 88.1% and kappa values of 0.54 and 0.49. Agreement between ARTHUR+DIANA and the rheumatologist: SH (PEA 57.9%, PCA 92.9%, binary 87.3%, kappa 0.38); Doppler (PEA 77.3%, PCA 94.2%, binary 91.2%, kappa 0.44) and with the independent assessor: SH (PEA 49.0%, PCA 91.2%, binary 80.0%, kappa 0.39); Doppler (PEA 62.6%, PCA 94.4%, binary 88.1%, kappa 0.48). ARTHUR V.2.0 and DIANA V.2.0 demonstrated repeatability on par with intra-expert agreement reported in the literature and showed encouraging agreement with human assessors, though further refinement is needed to optimise performance across specific joints.

Evaluating the Predictive Value of Preoperative MRI for Erectile Dysfunction Following Radical Prostatectomy

Gideon N. L. Rouwendaal, Daniël Boeke, Inge L. Cox, Henk G. van der Poel, Margriet C. van Dijk-de Haan, Regina G. H. Beets-Tan, Thierry N. Boellaard, Wilson Silva

arxiv logopreprintAug 5 2025
Accurate preoperative prediction of erectile dysfunction (ED) is important for counseling patients undergoing radical prostatectomy. While clinical features are established predictors, the added value of preoperative MRI remains underexplored. We investigate whether MRI provides additional predictive value for ED at 12 months post-surgery, evaluating four modeling strategies: (1) a clinical-only baseline, representing current state-of-the-art; (2) classical models using handcrafted anatomical features derived from MRI; (3) deep learning models trained directly on MRI slices; and (4) multimodal fusion of imaging and clinical inputs. Imaging-based models (maximum AUC 0.569) slightly outperformed handcrafted anatomical approaches (AUC 0.554) but fell short of the clinical baseline (AUC 0.663). Fusion models offered marginal gains (AUC 0.586) but did not exceed clinical-only performance. SHAP analysis confirmed that clinical features contributed most to predictive performance. Saliency maps from the best-performing imaging model suggested a predominant focus on anatomically plausible regions, such as the prostate and neurovascular bundles. While MRI-based models did not improve predictive performance over clinical features, our findings suggest that they try to capture patterns in relevant anatomical structures and may complement clinical predictors in future multimodal approaches.

Augmenting Continual Learning of Diseases with LLM-Generated Visual Concepts

Jiantao Tan, Peixian Ma, Kanghao Chen, Zhiming Dai, Ruixuan Wang

arxiv logopreprintAug 5 2025
Continual learning is essential for medical image classification systems to adapt to dynamically evolving clinical environments. The integration of multimodal information can significantly enhance continual learning of image classes. However, while existing approaches do utilize textual modality information, they solely rely on simplistic templates with a class name, thereby neglecting richer semantic information. To address these limitations, we propose a novel framework that harnesses visual concepts generated by large language models (LLMs) as discriminative semantic guidance. Our method dynamically constructs a visual concept pool with a similarity-based filtering mechanism to prevent redundancy. Then, to integrate the concepts into the continual learning process, we employ a cross-modal image-concept attention module, coupled with an attention loss. Through attention, the module can leverage the semantic knowledge from relevant visual concepts and produce class-representative fused features for classification. Experiments on medical and natural image datasets show our method achieves state-of-the-art performance, demonstrating the effectiveness and superiority of our method. We will release the code publicly.

Innovative machine learning approach for liver fibrosis and disease severity evaluation in MAFLD patients using MRI fat content analysis.

Hou M, Zhu Y, Zhou H, Zhou S, Zhang J, Zhang Y, Liu X

pubmed logopapersAug 5 2025
This study employed machine learning models to quantitatively analyze liver fat content from MRI images for the evaluation of liver fibrosis and disease severity in patients with metabolic dysfunction-associated fatty liver disease (MAFLD). A total of 26 confirmed MAFLD cases, along with MRI image sequences obtained from public repositories, were included to perform a comprehensive assessment. Radiomics features-such as contrast, correlation, homogeneity, energy, and entropy-were extracted and used to construct a random forest classification model with optimized hyperparameters. The model achieved outstanding performance, with an accuracy of 96.8%, sensitivity of 95.7%, specificity of 97.8%, and an F1-score of 96.8%, demonstrating its strong capability in accurately evaluating the degree of liver fibrosis and overall disease severity in MAFLD patients. The integration of machine learning with MRI-based analysis offers a promising approach to enhancing clinical decision-making and guiding treatment strategies, underscoring the potential of advanced technologies to improve diagnostic precision and disease management in MAFLD.

Sex differences in white matter amplitude of low-frequency fluctuation associated with cognitive performance across the Alzheimer's disease continuum.

Chen X, Zhou S, Wang W, Gao Z, Ye W, Zhu W, Lu Y, Ma J, Li X, Yu Y, Li X

pubmed logopapersAug 5 2025
BackgroundSex differences in Alzheimer's disease (AD) progression offer insights into pathogenesis and clinical management. White matter (WM) amplitude of low-frequency fluctuation (ALFF), reflecting neural activity, represents a potential disease biomarker.ObjectiveTo explore whether there are sex differences in regional WM ALFF among AD patients, amnestic mild cognitive impairment (aMCI) patients, and healthy controls (HCs), how it is related to cognitive performance, and whether it can be used for disease classification.MethodsResting-state functional magnetic resonance images and cognitive assessments were obtained from 85 AD (36 female), 52 aMCI (23 female), and 78 HCs (43 female). Two-way ANOVA examined group × sex interactions for regional WM ALFF and cognitive scores. WM ALFF-cognition correlations and support vector machine diagnostic accuracy were evaluated.ResultsSex × group interaction effects on WM ALFF were detected in the right superior longitudinal fasciculus (<i>F</i> = 20.08, <i>p</i><sub>FDR_corrected</sub> < 0.001), left superior longitudinal fasciculus (<i>F</i> = 5.45, <i>p</i><sub>GRF_corrected</sub> < 0.001) and right inferior longitudinal fasciculus (<i>F</i> = 6.00, <i>p</i><sub>GRF_corrected</sub> = 0.001). These WM ALFF values positively correlated with different cognitive performance between sexes. The support vector machine learning best differentiated aMCI from AD in the full cohort and males (accuracy = 75%), and HCs from aMCI in females (accuracy = 93%).ConclusionsSex differences in regional WM ALFF during AD progression are associated with cognitive performance and can be utilized for disease classification.

Integration of Spatiotemporal Dynamics and Structural Connectivity for Automated Epileptogenic Zone Localization in Temporal Lobe Epilepsy.

Xiao L, Zheng Q, Li S, Wei Y, Si W, Pan Y

pubmed logopapersAug 5 2025
Accurate localization of the epileptogenic zone (EZ) is essential for surgical success in temporal lobe epilepsy. While stereoelectroencephalography (SEEG) and structural magnetic resonance imaging (MRI) provide complementary insights, existing unimodal methods fail to fully capture epileptogenic brain activity, and multimodal fusion remains challenging due to data complexity and surgeon-dependent interpretations. To address these issues, we proposed a novel multimodal framework to improve EZ localization with SEEG-drived electrophysiology with structural connectivity in temporal lobe epilepsy. By retrospectively analyzing SEEG, post-implant Computed Tomography (CT) and MRI (T1 & Diffusion Tensor Imaging (DTI)) data from 15 patients, we reconstructed SEEG electrode positions and obtained the SEEG and structural connectivity fusion features. We then proposed a spatiotemporal co-attention deep neural network (ST-CANet) to identify the fusion features, categorizing electrodes into seizure onset zone (SOZ), propagation zone (PZ), and non-involved zone (NIZ). Anatomical EZ boundaries were delineated by fusing the electrode position and classification information on brain atlas. The proposed method was evaluated based on the identification and localization performance of three epilepsy-related zones. The experiment results demonstrate that our method achieves 98.08% average accuracy and outperforms other identification methods, and improves the localization with Dice similarity coefficients (DSC) of 95.65% (SOZ), 92.13% (PZ), and 99.61% (NIZ), aligning with clinically validated surgical resection areas. This multimodal fusion strategy based on electrophysiological and structural connectivity information promises to assist neurosurgeons in accurately localizing EZ and may find broader applications in preoperative planning for epilepsy surgeries.

CAPoxy: a feasibility study to investigate multispectral imaging in nailfold capillaroscopy

Taylor-Williams, M., Khalil, I., Manning, J., Dinsdale, G., Berks, M., Porcu, L., Wilkinson, S., Bohndiek, S., Murray, A.

medrxiv logopreprintAug 5 2025
BackgroundNailfold capillaroscopy enables visualisation of structural abnormalities in the microvasculature of patients with systemic sclerosis (SSc). The objective of this feasibility study was to determine whether multispectral imaging could provide functional assessment (differences in haemoglobin concentration or oxygenation) of capillaries to aid discrimination between healthy controls and patients with SSc. MSI of nailfold capillaries visualizes the smallest blood vessels and the impact of SSc on angiogenesis and their deformation, making it suitable for evaluating oxygenation-sensitive imaging techniques. Imaging of the nailfold capillaries offers tissue-specific oxygenation information, unlike pulse oximetry, which measures arterial blood oxygenation as a single-point measurement. MethodsThe CAPoxy study was a single-centre, cross-sectional, feasibility study of nailfold capillary multispectral imaging, comparing a cohort of patients with SSc to controls. A nine-band multispectral camera was used to image 22 individuals (10 patients with SSc and 12 controls). Linear mixed-effects models and summary statistics were used to compare the different regions of the nailfold (capillaries, surrounding edges, and outside area) between SSc and controls. A machine learning model was used to compare the two groups. ResultsPatients with SSc exhibited higher indicators of haemoglobin concentration in the capillary and adjacent regions compared to controls, which were significant in the regions surrounding the capillaries (p<0.001). There were also spectral differences between the SSc and controls groups that could indicate differences in oxygenation of the capillaries and surrounding tissue. Additionally, a machine learning model distinguished SSc patients from healthy controls with an accuracy of 84%, suggesting potential for multispectral imaging to classify SSc based on structural and functional microvascular changes. ConclusionsData indicates that multispectral imaging differentiates between patients with SSc from controls based on differences in vascular function. Further work to develop a targeted spectral camera would further improve the contrast between patients with SSc and controls, enabling better imaging. Key messagesMultispectral imaging holds promise for providing functional oxygenation measurement in nailfold capillaroscopy. Significant oxygenation differences between individuals with systemic sclerosis and healthy controls can be detected with multispectral imaging in the tissue surrounding capillaries.

Beyond unimodal analysis: Multimodal ensemble learning for enhanced assessment of atherosclerotic disease progression.

Guarrasi V, Bertgren A, Näslund U, Wennberg P, Soda P, Grönlund C

pubmed logopapersAug 5 2025
Atherosclerosis is a leading cardiovascular disease typified by fatty streaks accumulating within arterial walls, culminating in potential plaque ruptures and subsequent strokes. Existing clinical risk scores, such as systematic coronary risk estimation and Framingham risk score, profile cardiovascular risks based on factors like age, cholesterol, and smoking, among others. However, these scores display limited sensitivity in early disease detection. Parallelly, ultrasound-based risk markers, such as the carotid intima media thickness, while informative, only offer limited predictive power. Notably, current models largely focus on either ultrasound image-derived risk markers or clinical risk factor data without combining both for a comprehensive, multimodal assessment. This study introduces a multimodal ensemble learning framework to assess atherosclerosis severity, especially in its early sub-clinical stage. We utilize a multi-objective optimization targeting both performance and diversity, aiming to integrate features from each modality effectively. Our objective is to measure the efficacy of models using multimodal data in assessing vascular aging, i.e., plaque presence and vascular age, over a six-year period. We also delineate a procedure for optimal model selection from a vast pool, focusing on best-suited models for classification tasks. Additionally, through eXplainable Artificial Intelligence techniques, this work delves into understanding key model contributors and discerning unique subject subgroups.

Natural language processing evaluation of trends in cervical cancer incidence in radiology reports: A ten-year survey.

López-Úbeda P, Martín-Noguerol T, Luna A

pubmed logopapersAug 4 2025
Cervical cancer commonly associated with human papillomavirus (HPV) infection, remains the fourth most common cancer in women globally. This study aims to develop and evaluate a Natural Language Processing (NLP) system to identify and analyze cervical cancer incidence trends from 2013 to 2023 at our institution, focusing on age-specific variations and evaluating the possible impact of HPV vaccination. This retrospective cohort study, we analyzed unstructured radiology reports collected between 2013 and 2023, comprising 433,207 studies involving 250,181 women who underwent CT, MRI, or ultrasound scans of the abdominopelvic region. A rule-based NLP system was developed to extract references to cervical cancer from these reports and validated against a set of 200 manually annotated cases reviewed by an experienced radiologist. The NLP system demonstrated excellent performance, achieving an accuracy of over 99.5 %. This high reliability enabled its application in a large-scale population study. Results show that the women under 30 maintain a consistently low cervical cancer incidence, likely reflecting early HPV vaccination impact. The 30-40 cohorts declined until 2020, followed by a slight increase, while the 40-60 groups exhibited an overall downward trend with fluctuations, suggesting long-term vaccine effects. Incidence in patients over 60 also declined, though with greater variability, possibly due to other risk factors. The developed NLP system effectively identified cervical cancer cases from unstructured radiology reports, facilitating an accurate analysis of the impact of HPV vaccination on cervical cancer prevalence and imaging study requirements. This approach demonstrates the potential of AI and NLP tools in enhancing data accuracy and efficiency in medical epidemiology research. NLP-based approaches can significantly improve the collection and analysis of epidemiological data on cervical cancer, supporting the development of more targeted and personalized prevention strategies-particularly in populations with heterogeneous HPV vaccination coverage.
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