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Page 37 of 72720 results

Attention-enhanced residual U-Net: lymph node segmentation method with bimodal MRI images.

Qiu J, Chen C, Li M, Hong J, Dong B, Xu S, Lin Y

pubmed logopapersJun 2 2025
In medical images, lymph nodes (LNs) have fuzzy boundaries, diverse shapes and sizes, and structures similar to surrounding tissues. To automatically segment uterine LNs from sagittal magnetic resonance (MRI) scans, we combined T2-weighted imaging (T2WI) and diffusion-weighted imaging (DWI) images and tested the final results in our proposed model. This study used a data set of 158 MRI images of patients with FIGO staged LN confirmed by pathology. To improve the robustness of the model, data augmentation was applied to expand the data set. The training data was manually annotated by two experienced radiologists. The DWI and T2 images were fused and inputted into U-Net. The efficient channel attention (ECA) module was added to U-Net. A residual network was added to the encoding-decoding stage, named Efficient residual U-Net (ERU-Net), to obtain the final segmentation results and calculate the mean intersection-over-union (mIoU). The experimental results demonstrated that the ERU-Net network showed strong segmentation performance, which was significantly better than other segmentation networks. The mIoU reached 0.83, and the average pixel accuracy was 0.91. In addition, the precision was 0.90, and the corresponding recall was 0.91. In this study, ERU-Net successfully achieved the segmentation of LN in uterine MRI images. Compared with other segmentation networks, our network has the best segmentation effect on uterine LN. This provides a valuable reference for doctors to develop more effective and efficient treatment plans.

MobileTurkerNeXt: investigating the detection of Bankart and SLAP lesions using magnetic resonance images.

Gurger M, Esmez O, Key S, Hafeez-Baig A, Dogan S, Tuncer T

pubmed logopapersJun 2 2025
The landscape of computer vision is predominantly shaped by two groundbreaking methodologies: transformers and convolutional neural networks (CNNs). In this study, we aim to introduce an innovative mobile CNN architecture designed for orthopedic imaging that efficiently identifies both Bankart and SLAP lesions. Our approach involved the collection of two distinct magnetic resonance (MR) image datasets, with the primary goal of automating the detection of Bankart and SLAP lesions. A novel mobile CNN, dubbed MobileTurkerNeXt, forms the cornerstone of this research. This newly developed model, comprising roughly 1 million trainable parameters, unfolds across four principal stages: the stem, main, downsampling, and output phases. The stem phase incorporates three convolutional layers to initiate feature extraction. In the main phase, we introduce an innovative block, drawing inspiration from ConvNeXt, EfficientNet, and ResNet architectures. The downsampling phase utilizes patchify average pooling and pixel-wise convolution to effectively reduce spatial dimensions, while the output phase is meticulously engineered to yield classification outcomes. Our experimentation with MobileTurkerNeXt spanned three comparative scenarios: Bankart versus normal, SLAP versus normal, and a tripartite comparison of Bankart, SLAP, and normal cases. The model demonstrated exemplary performance, achieving test classification accuracies exceeding 96% across these scenarios. The empirical results underscore the MobileTurkerNeXt's superior classification process in differentiating among Bankart, SLAP, and normal conditions in orthopedic imaging. This underscores the potential of our proposed mobile CNN in advancing diagnostic capabilities and contributing significantly to the field of medical image analysis.

Current trends in glioma tumor segmentation: A survey of deep learning modules.

Shoushtari FK, Elahi R, Valizadeh G, Moodi F, Salari HM, Rad HS

pubmed logopapersJun 2 2025
Multiparametric Magnetic Resonance Imaging (mpMRI) is the gold standard for diagnosing brain tumors, especially gliomas, which are difficult to segment due to their heterogeneity and varied sub-regions. While manual segmentation is time-consuming and error-prone, Deep Learning (DL) automates the process with greater accuracy and speed. We conducted ablation studies on surveyed articles to evaluate the impact of "add-on" modules-addressing challenges like spatial information loss, class imbalance, and overfitting-on glioma segmentation performance. Advanced modules-such as atrous (dilated) convolutions, inception, attention, transformer, and hybrid modules-significantly enhance segmentation accuracy, efficiency, multiscale feature extraction, and boundary delineation, while lightweight modules reduce computational complexity. Experiments on the Brain Tumor Segmentation (BraTS) dataset (comprising low- and high-grade gliomas) confirm their robustness, with top-performing models achieving high Dice score for tumor sub-regions. This survey underscores the need for optimal module selection and placement to balance speed, accuracy, and interpretability in glioma segmentation. Future work should focus on improving model interpretability, lowering computational costs, and boosting generalizability. Tools like NeuroQuant® and Raidionics demonstrate potential for clinical translation. Further refinement could enable regulatory approval, advancing precision in brain tumor diagnosis and treatment planning.

Referenceless 4D Flow Cardiovascular Magnetic Resonance with deep learning.

Trenti C, Ylipää E, Ebbers T, Carlhäll CJ, Engvall J, Dyverfeldt P

pubmed logopapersJun 2 2025
Despite its potential to improve the assessment of cardiovascular diseases, 4D Flow CMR is hampered by long scan times. 4D Flow CMR is conventionally acquired with three motion encodings and one reference encoding, as the 3-dimensional velocity data are obtained by subtracting the phase of the reference from the phase of the motion encodings. In this study, we aim to use deep learning to predict the reference encoding from the three motion encodings for cardiovascular 4D Flow. A U-Net was trained with adversarial learning (U-Net<sub>ADV</sub>) and with a velocity frequency-weighted loss function (U-Net<sub>VEL</sub>) to predict the reference encoding from the three motion encodings obtained with a non-symmetric velocity-encoding scheme. Whole-heart 4D Flow datasets from 126 patients with different types of cardiomyopathies were retrospectively included. The models were trained on 113 patients with a 5-fold cross-validation, and tested on 13 patients. Flow volumes in the aorta and pulmonary artery, mean and maximum velocity, total and maximum turbulent kinetic energy at peak systole in the cardiac chambers and main vessels were assessed. 3-dimensional velocity data reconstructed with the reference encoding predicted by deep learning agreed well with the velocities obtained with the reference encoding acquired at the scanner for both models. U-Net<sub>ADV</sub> performed more consistently throughout the cardiac cycle and across the test subjects, while U-Net<sub>VEL</sub> performed better for systolic velocities. Comprehensively, the largest error for flow volumes, maximum and mean velocities was -6.031% for maximum velocities in the right ventricle for the U-Net<sub>ADV</sub>, and -6.92% for mean velocities in the right ventricle for U-Net<sub>VEL</sub>. For total turbulent kinetic energy, the highest errors were in the left ventricle (-77.17%) for the U-Net<sub>ADV</sub>, and in the right ventricle (24.96%) for the U-Net<sub>VEL</sub>, while for maximum turbulent kinetic energy were in the pulmonary artery for both models, with a value of -15.5% for U-Net<sub>ADV</sub> and 15.38% for the U-Net<sub>VEL</sub>. Deep learning-enabled referenceless 4D Flow CMR permits velocities and flow volumes quantification comparable to conventional 4D Flow. Omitting the reference encoding reduces the amount of acquired data by 25%, thus allowing shorter scan times or improved resolution, which is valuable for utilization in the clinical routine.

Evolution of Cortical Lesions and Function-Specific Cognitive Decline in People With Multiple Sclerosis.

Krijnen EA, Jelgerhuis J, Van Dam M, Bouman PM, Barkhof F, Klawiter EC, Hulst HE, Strijbis EMM, Schoonheim MM

pubmed logopapersJun 1 2025
Cortical lesions in multiple sclerosis (MS) severely affect cognition, but their longitudinal evolution and impact on specific cognitive functions remain understudied. This study investigates the evolution of function-specific cognitive functioning over 10 years in people with MS and assesses the influence of cortical lesion load and formation on these trajectories. In this prospectively collected study, people with MS underwent 3T MRI (T1 and fluid-attenuated inversion recovery) at 3 study visits between 2008 and 2022. Cognitive functioning was evaluated based on neuropsychological assessment reflecting 7 cognitive functions: attention; executive functioning (EF); information processing speed (IPS); verbal fluency; and verbal, visuospatial, and working memory. Cortical lesions were manually identified on artificial intelligence-generated double-inversion recovery images. Linear mixed models were constructed to assess the temporal evolution between cortical lesion load and function-specific cognitive decline. In addition, analyses were stratified by MS disease stage: early and late relapsing-remitting MS (cutoff disease duration at 15 years) and progressive MS. The study included 223 people with MS (mean age, 47.8 ± 11.1 years; 153 women) and 62 healthy controls. All completed 5-year follow-up, and 37 healthy controls and 94 with MS completed 10-year follow-up. At baseline, people with MS exhibited worse functioning of IPS and working memory. Over 10 years, cognitive decline was most severe in attention, verbal memory, and EF. At baseline, people with MS had a median cortical lesion count of 7 (range 0-73), which was related to subsequent decline in attention (B[95% CI] = -0.22 [-0.40 to -0.03]) and verbal fluency (B[95% CI] = -0.23[-0.37 to -0.09]). Over time, cortical lesions increased by a median count of 4 (range -2 to 71), particularly in late and progressive disease, and was related to decline in verbal fluency (B [95% CI] = -0.33 [-0.51 to -0.15]). The associations between (change in) cortical lesion load and cognitive decline were not modified by MS disease stage. Cognition worsened over 10 years, particularly affecting attention, verbal memory, and EF, while preexisting impairments were worst in other functions such as IPS. Worse baseline cognitive functioning was related to baseline cortical lesions, whereas baseline cortical lesions and cortical lesion formation were related to cognitive decline in functions less affected at baseline. Accumulating cortical damage leads to spreading of cognitive impairments toward additional functions.

Accelerated High-resolution T1- and T2-weighted Breast MRI with Deep Learning Super-resolution Reconstruction.

Mesropyan N, Katemann C, Leutner C, Sommer A, Isaak A, Weber OM, Peeters JM, Dell T, Bischoff L, Kuetting D, Pieper CC, Lakghomi A, Luetkens JA

pubmed logopapersJun 1 2025
To assess the performance of an industry-developed deep learning (DL) algorithm to reconstruct low-resolution Cartesian T1-weighted dynamic contrast-enhanced (T1w) and T2-weighted turbo-spin-echo (T2w) sequences and compare them to standard sequences. Female patients with indications for breast MRI were included in this prospective study. The study protocol at 1.5 Tesla MRI included T1w and T2w. Both sequences were acquired in standard resolution (T1<sub>S</sub> and T2<sub>S</sub>) and in low-resolution with following DL reconstructions (T1<sub>DL</sub> and T2<sub>DL</sub>). For DL reconstruction, two convolutional networks were used: (1) Adaptive-CS-Net for denoising with compressed sensing, and (2) Precise-Image-Net for resolution upscaling of previously downscaled images. Overall image quality was assessed using 5-point-Likert scale (from 1=non-diagnostic to 5=excellent). Apparent signal-to-noise (aSNR) and contrast-to-noise (aCNR) ratios were calculated. Breast Imaging Reporting and Data System (BI-RADS) agreement between different sequence types was assessed. A total of 47 patients were included (mean age, 58±11 years). Acquisition time for T1<sub>DL</sub> and T2<sub>DL</sub> were reduced by 51% (44 vs. 90 s per dynamic phase) and 46% (102 vs. 192 s), respectively. T1<sub>DL</sub> and T2<sub>DL</sub> showed higher overall image quality (e.g., 4 [IQR, 4-4] for T1<sub>S</sub> vs. 5 [IQR, 5-5] for T1<sub>DL</sub>, P<0.001). Both, T1<sub>DL</sub> and T2<sub>DL</sub> revealed higher aSNR and aCNR than T1<sub>S</sub> and T2<sub>S</sub> (e.g., aSNR: 32.35±10.23 for T2<sub>S</sub> vs. 27.88±6.86 for T2<sub>DL</sub>, P=0.014). Cohen k agreement by BI-RADS assessment was excellent (0.962, P<0.001). DL for denoising and resolution upscaling reduces acquisition time and improves image quality for T1w and T2w breast MRI.

Neuroimaging and machine learning in eating disorders: a systematic review.

Monaco F, Vignapiano A, Di Gruttola B, Landi S, Panarello E, Malvone R, Palermo S, Marenna A, Collantoni E, Celia G, Di Stefano V, Meneguzzo P, D'Angelo M, Corrivetti G, Steardo L

pubmed logopapersJun 1 2025
Eating disorders (EDs), including anorexia nervosa (AN), bulimia nervosa (BN), and binge eating disorder (BED), are complex psychiatric conditions with high morbidity and mortality. Neuroimaging and machine learning (ML) represent promising approaches to improve diagnosis, understand pathophysiological mechanisms, and predict treatment response. This systematic review aimed to evaluate the application of ML techniques to neuroimaging data in EDs. Following PRISMA guidelines (PROSPERO registration: CRD42024628157), we systematically searched PubMed and APA PsycINFO for studies published between 2014 and 2024. Inclusion criteria encompassed human studies using neuroimaging and ML methods applied to AN, BN, or BED. Data extraction focused on study design, imaging modalities, ML techniques, and performance metrics. Quality was assessed using the GRADE framework and the ROBINS-I tool. Out of 185 records screened, 5 studies met the inclusion criteria. Most applied support vector machines (SVMs) or other supervised ML models to structural MRI or diffusion tensor imaging data. Cortical thickness alterations in AN and diffusion-based metrics effectively distinguished ED subtypes. However, all studies were observational, heterogeneous, and at moderate to serious risk of bias. Sample sizes were small, and external validation was lacking. ML applied to neuroimaging shows potential for improving ED characterization and outcome prediction. Nevertheless, methodological limitations restrict generalizability. Future research should focus on larger, multicenter, and multimodal studies to enhance clinical applicability. Level IV, multiple observational studies with methodological heterogeneity and moderate to serious risk of bias.

Deep Learning in Knee MRI: A Prospective Study to Enhance Efficiency, Diagnostic Confidence and Sustainability.

Reschke P, Gotta J, Gruenewald LD, Bachir AA, Strecker R, Nickel D, Booz C, Martin SS, Scholtz JE, D'Angelo T, Dahm D, Solim LA, Konrad P, Mahmoudi S, Bernatz S, Al-Saleh S, Hong QAL, Sommer CM, Eichler K, Vogl TJ, Haberkorn SM, Koch V

pubmed logopapersJun 1 2025
The objective of this study was to evaluate a combination of deep learning (DL)-reconstructed parallel acquisition technique (PAT) and simultaneous multislice (SMS) acceleration imaging in comparison to conventional knee imaging. Adults undergoing knee magnetic resonance imaging (MRI) with DL-enhanced acquisitions were prospectively analyzed from December 2023 to April 2024. The participants received T1 without fat saturation and fat-suppressed PD-weighted TSE pulse sequences using conventional two-fold PAT (P2) and either DL-enhanced four-fold PAT (P4) or a combination of DL-enhanced four-fold PAT with two-fold SMS acceleration (P4S2). Three independent readers assessed image quality, signal-to-noise ratio (SNR), contrast-to-noise ratio (CNR), and radiomics features. 34 participants (mean age 45±17years; 14 women) were included who underwent P4S2, P4, and P2 imaging. Both P4S2 and P4 demonstrated higher CNR and SNR values compared to P2 (P<.001). P4 was diagnostically inferior to P2 only in the visualization of cartilage damage (P<.005), while P4S2 consistently outperformed P2 in anatomical delineation across all evaluated structures and raters (P<.05). Radiomics analysis revealed significant differences in contrast and gray-level characteristics among P2, P4, and P4S2 (P<.05). P4 reduced time by 31% and P4S2 by 41% compared to P2 (P<.05). P4S2 DL acceleration offers significant advancements over P4 and P2 in knee MRI, combining superior image quality and improved anatomical delineation at significant time reduction. Its improvements in anatomical delineation, energy consumption, and workforce optimization make P4S2 a significant step forward.

Habitat Radiomics Based on MRI for Predicting Metachronous Liver Metastasis in Locally Advanced Rectal Cancer: a Two‑center Study.

Shi S, Jiang T, Liu H, Wu Y, Singh A, Wang Y, Xie J, Li X

pubmed logopapersJun 1 2025
This study aimed to explore the feasibility of using habitat radiomics based on magnetic resonance imaging (MRI) to predict metachronous liver metastasis (MLM) in locally advanced rectal cancer (LARC) patients. A nomogram was developed by integrating multiple factors to enhance predictive accuracy. Retrospective data from 385 LARC patients across two centers were gathered. The data from Center 1 were split into a training set of 203 patients and an internal validation set of 87 patients, while Center 2 provided an external test set of 95 patients. K - means clustering was used on T2 - weighted images, and the region of interest was extended at different thicknesses. After feature extraction and selection, four machine - learning algorithms were utilized to build radiomics models. A nomogram was created by combining habitat radiomics, conventional radiomics, and clinical independent predictors. Model performance was evaluated by the AUC, and clinical utility was assessed through calibration curve and DCA. Habitat radiomics outperformed other single models in predicting MLM, with AUCs of 0.926, 0.864, and 0.851 in respective sets. The integrated nomogram achieved even higher AUCs of 0.959, 0.925, and 0.889. DCA and calibration curve analysis showed its high net benefit and good calibration. MRI - based habitat radiomics can effectively predict MLM in LARC patients. The integrated nomogram has optimal predictive performance and improves model accuracy significantly.
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