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PWLS-SOM: alternative PWLS reconstruction for limited-view CT by strategic optimization of a deep learning model.

Chen C, Zhang L, Xing Y, Chen Z

pubmed logopapersAug 27 2025
While deep learning (DL) methods have exhibited promising results in mitigating streaking artifacts caused by limited-view computed tomography (CT), their generalization to practical applications remains challenging. To address this challenge, we aim to develop a novel approach that integrates DL priors with targeted-case data consistency for improved artifact suppression and robust reconstruction.
Approach: We propose an alternative Penalized Weighted Least Squares reconstruction framework by Strategic Optimization of a DL Model (PWLS-SOM). This framework combines data-driven DL priors with data consistency constraints in a three-stage process: (1) Group-level embedding: DL network parameters are optimized on a large-scale paired dataset to learn general artifact elimination. (2) Significance evaluation: A novel significance score quantifies the contribution of DL model parameters, guiding the subsequent strategic adaptation. (3) Individual-level consistency adaptation: PWLS-driven strategic optimization further adapts DL parameters for target-specific projection data.
Main Results: Experiments were conducted on sparse-view (90 views) circular trajectory CT data and a multi-segment linear trajectory CT scan with a mixed data missing problem. PWLS-SOM reconstruction demonstrated superior generalization across variations in patients, anatomical structures, and data distributions. It outperformed supervised DL methods in recovering contextual structures and adapting to practical CT scenarios. The method was validated with real experiments on a dead rat, showcasing its applicability to real-world CT scans.
Significance: PWLS-SOM reconstruction advances the field of limited-view CT reconstruction by uniting DL priors with PWLS adaptation. This approach facilitates robust and personalized imaging. The introduction of the significance score provides an efficient metric to evaluate generalization and guide the strategic optimization of DL parameters, enhancing adaptability across diverse data and practical imaging conditions.

Development of Privacy-preserving Deep Learning Model with Homomorphic Encryption: A Technical Feasibility Study in Kidney CT Imaging.

Lee SW, Choi J, Park MJ, Kim H, Eo SH, Lee G, Kim S, Suh J

pubmed logopapersAug 27 2025
<i>"Just Accepted" papers have undergone full peer review and have been accepted for publication in <i>Radiology: Artificial Intelligence</i>. This article will undergo copyediting, layout, and proof review before it is published in its final version. Please note that during production of the final copyedited article, errors may be discovered which could affect the content</i>. Purpose To evaluate the technical feasibility of implementing homomorphic encryption in deep learning models for privacy-preserving CT image analysis of renal masses. Materials and Methods A privacy-preserving deep learning system was developed through three sequential technical phases: a reference CNN model (Ref-CNN) based on ResNet architecture, modification for encryption compatibility (Approx-CNN) by replacing ReLU with polynomial approximation and max-pooling with averagepooling, and implementation of fully homomorphic encryption (HE-CNN). The CKKS encryption scheme was used for its capability to perform arithmetic operations on encrypted real numbers. Using 12,446 CT images from a public dataset (3,709 renal cysts, 5,077 normal kidneys, and 2,283 kidney tumors), we evaluated model performance using area under the receiver operating characteristic curve (AUC) and area under the precision-recall curve (AUPRC). Results All models demonstrated high diagnostic accuracy with AUC ranging from 0.89-0.99 and AUPRC from 0.67-0.99. The diagnostic performance trade-off was minimal from Ref-CNN to Approx-CNN (AUC: 0.99 to 0.97 for normal category), with no evidence of differences between models. However, encryption significantly increased storage and computational demands: a 256 × 256-pixel image expanded from 65KB to 32MB, requiring 50 minutes for CPU inference but only 90 seconds with GPU acceleration. Conclusion This technical development demonstrates that privacy-preserving deep learning inference using homomorphic encryption is feasible for renal mass classification on CT images, achieving comparable diagnostic performance while maintaining data privacy through end-to-end encryption. ©RSNA, 2025.

E-TBI: explainable outcome prediction after traumatic brain injury using machine learning.

Ngo TH, Tran MH, Nguyen HB, Hoang VN, Le TL, Vu H, Tran TK, Nguyen HK, Can VM, Nguyen TB, Tran TH

pubmed logopapersAug 27 2025
Traumatic brain injury (TBI) is one of the most prevalent health conditions, with severity assessment serving as an initial step for management, prognosis, and targeted therapy. Existing studies on automated outcome prediction using machine learning (ML) often overlook the importance of TBI features in decision-making and the challenges posed by limited and imbalanced training data. Furthermore, many attempts have focused on quantitatively evaluating ML algorithms without explaining the decisions, making the outcomes difficult to interpret and apply for less-experienced doctors. This study presents a novel supportive tool, named E-TBI (explainable outcome prediction after TBI), designed with a user-friendly web-based interface to assist doctors in outcome prediction after TBI using machine learning. The tool is developed with the capability to visualize rules applied in the decision-making process. At the tool's core is a feature selection and classification module that receives multimodal data from TBI patients (demographic data, clinical data, laboratory test results, and CT findings). It then infers one of four TBI severity levels. This research investigates various machine learning models and feature selection techniques, ultimately identifying the optimal combination of gradient boosting machine and random forest for the task, which we refer to as GBMRF. This method enabled us to identify a small set of essential features, reducing patient testing costs by 35%, while achieving the highest accuracy rates of 88.82% and 89.78% on two datasets (a public TBI dataset and our self-collected dataset, TBI_MH103). Classification modules are available at https://github.com/auverngo110/Traumatic_Brain_Injury_103 .

Benign-Malignant Classification of Pulmonary Nodules in CT Images Based on Fractal Spectrum Analysis

Ma, Y., Lei, S., Wang, B., Qiao, Y., Xing, F., Liang, T.

medrxiv logopreprintAug 26 2025
This study reveals that pulmonary nodules exhibit distinct multifractal characteristics, with malignant nodules demonstrating significantly higher fractal dimensions at larger scales. Based on this fundamental finding, an automatic benign-malignant classification method for pulmonary nodules in CT images was developed using fractal spectrum analysis. By computing continuous three-dimensional fractal dimensions on 121 nodule samples from the LIDC-IDRI database, a 201-dimensional fractal feature spectrum was extracted, and a simplified multilayer perceptron neural network (with only 6x6 minimal neural network nodes in the intermediate layers) was constructed for pulmonary nodule classification. Experimental results demonstrate that this method achieved 96.69% accuracy in distinguishing benign from malignant pulmonary nodules. The discovery of scale-dependent multifractal properties enables fractal spectrum analysis to effectively capture the complexity differences in multi-scale structures of malignant nodules, providing an efficient and interpretable AI-aided diagnostic method for early lung cancer diagnosis.

A Machine Learning Approach to Volumetric Computations of Solid Pulmonary Nodules

Yihan Zhou, Haocheng Huang, Yue Yu, Jianhui Shang

arxiv logopreprintAug 26 2025
Early detection of lung cancer is crucial for effective treatment and relies on accurate volumetric assessment of pulmonary nodules in CT scans. Traditional methods, such as consolidation-to-tumor ratio (CTR) and spherical approximation, are limited by inconsistent estimates due to variability in nodule shape and density. We propose an advanced framework that combines a multi-scale 3D convolutional neural network (CNN) with subtype-specific bias correction for precise volume estimation. The model was trained and evaluated on a dataset of 364 cases from Shanghai Chest Hospital. Our approach achieved a mean absolute deviation of 8.0 percent compared to manual nonlinear regression, with inference times under 20 seconds per scan. This method outperforms existing deep learning and semi-automated pipelines, which typically have errors of 25 to 30 percent and require over 60 seconds for processing. Our results show a reduction in error by over 17 percentage points and a threefold acceleration in processing speed. These advancements offer a highly accurate, efficient, and scalable tool for clinical lung nodule screening and monitoring, with promising potential for improving early lung cancer detection.

Machine learning prediction of effective radiation doses in various computed tomography applications: a virtual human phantom study.

Tanyildizi-Kokkulunk H

pubmed logopapersAug 26 2025
In this work, it was aimed to employ machine learning (ML) algorithms to accurately forecast the radiation doses for phantoms while accounting for the most popular CT protocols. A cloud-based software was utilized to calculate the effective doses from different CT protocols. To simulate a range of adult patients with different weights, eight entire body mesh-based computational phantom sets were used. The head, neck, and chest-abdomen-pelvis CT scan characteristics were combined to create a dataset with 33 rows for each phantom and 792 rows total. At the ML stage, linear (LR), random forest (RF) and support vector regression (SVR) were used. Mean absolute error, mean squared error and accuracy were used to evaluate the performances. The female phantoms received higher doses (7.8 %) than males. Furthermore, an average of 11 % more dose was taken to the normal weight phantom than to the overweight, the overweight in comparison to the obese I, and the obese I in comparison to the obese II. Among the ML algorithms, the LR showed 0 error rate and 100 % accuracy in predicting CT doses. The LR was shown to be the best approach out of those used in the ML estimation of CT-induced doses.

Improved pulmonary embolism detection in CT pulmonary angiogram scans with hybrid vision transformers and deep learning techniques.

Abdelhamid A, El-Ghamry A, Abdelhay EH, Abo-Zahhad MM, Moustafa HE

pubmed logopapersAug 26 2025
Pulmonary embolism (PE) represents a severe, life-threatening cardiovascular condition and is notably the third leading cause of cardiovascular mortality, after myocardial infarction and stroke. This pathology occurs when blood clots obstruct the pulmonary arteries, impeding blood flow and oxygen exchange in the lungs. Prompt and accurate detection of PE is critical for appropriate clinical decision-making and patient survival. The complexity involved in interpreting medical images can often results misdiagnosis. However, recent advances in Deep Learning (DL) have substantially improved the capabilities of Computer-Aided Diagnosis (CAD) systems. Despite these advancements, existing single-model DL methods are limited when handling complex, diverse, and imbalanced medical imaging datasets. Addressing this gap, our research proposes an ensemble framework for classifying PE, capitalizing on the unique capabilities of ResNet50, DenseNet121, and Swin Transformer models. This ensemble method harnesses the complementary strengths of convolutional neural networks (CNNs) and vision transformers (ViTs), leading to improved prediction accuracy and model robustness. The proposed methodology includes a sophisticated preprocessing pipeline leveraging autoencoder (AE)-based dimensionality reduction, data augmentation to avoid overfitting, discrete wavelet transform (DWT) for multiscale feature extraction, and Sobel filtering for effective edge detection and noise reduction. The proposed model was rigorously evaluated using the public Radiological Society of North America (RSNA-STR) PE dataset, demonstrating remarkable performance metrics of 97.80% accuracy and a 0.99 for Area Under Receiver Operating Curve (AUROC). Comparative analysis demonstrated superior performance over state-of-the-art pre-trained models and recent ViT-based approaches, highlighting our method's effectiveness in improving early PE detection and providing robust support for clinical decision-making.

Validation of an Automated CT Image Analysis in the Prevention of Urinary Stones with Hydration Trial.

Tasian GE, Maalouf NM, Harper JD, Sivalingam S, Logan J, Al-Khalidi HR, Lieske JC, Selman-Fermin A, Desai AC, Lai H, Kirkali Z, Scales CD, Fan Y

pubmed logopapersAug 26 2025
<b><i>Introduction and Objective:</i></b> Kidney stone growth and new stone formation are common clinical trial endpoints and are associated with future symptomatic events. To date, a manual review of CT scans has been required to assess stone growth and new stone formation, which is laborious. We validated the performance of a software algorithm that automatically identified, registered, and measured stones over longitudinal CT studies. <b><i>Methods:</i></b> We validated the performance of a pretrained machine learning algorithm to classify stone outcomes on longitudinal CT scan images at baseline and at the end of the 2-year follow-up period for 62 participants aged >18 years in the Prevention of Urinary Stones with Hydration (PUSH) randomized controlled trial. Stones were defined as an area of voxels with a minimum linear dimension of 2 mm that was higher in density than the mean plus 4 standard deviations of all nonnegative HU values within the kidney. The four outcomes assessed were: (1) growth of at least one existing stone by ≥2 mm, (2) formation of at least one new ≥2 mm stone, (3) no stone growth or new stone formation, and (4) loss of at least one stone. The accuracy of the algorithm was determined by comparing its outcomes to the gold standard of independent review of the CT images by at least two expert clinicians. <b><i>Results:</i></b> The algorithm correctly classified outcomes for 61 paired scans (98.4%). One pair that the algorithm incorrectly classified as stone growth was a new renal artery calcification on end-of-study CT. <b><i>Conclusions:</i></b> An automated image analysis method validated for the prospective PUSH trial was highly accurate for determining clinical outcomes of new stone formation, stone growth, stable stone size, and stone loss on longitudinal CT images. This method has the potential to improve the accuracy and efficiency of clinical care and endpoint determination for future clinical trials.

Bronchiectasis in patients with chronic obstructive pulmonary disease: AI-based CT quantification using the bronchial tapering ratio.

Park H, Choe J, Lee SM, Lim S, Lee JS, Oh YM, Lee JB, Hwang HJ, Yun J, Bae S, Yu D, Loh LC, Ong CK, Seo JB

pubmed logopapersAug 26 2025
Although chest CT is the primary tool for evaluating bronchiectasis, accurately measuring its extent poses challenges. This study aimed to automatically quantify bronchiectasis using an artificial intelligence (AI)-based analysis of the bronchial tapering ratio on chest CT and assess its association with clinical outcomes in patients with chronic obstructive pulmonary disease (COPD). COPD patients from two prospective multicenter cohorts were included. AI-based airway quantification was performed on baseline CT, measuring the tapering ratio for each bronchus in the whole lung. The bronchiectasis score accounting for the extent of bronchi with abnormal tapering (inner lumen tapering ratio ≥ 1.1, indicating airway dilatation) in the whole lung was calculated. Associations between the bronchiectasis score and all-cause mortality and acute exacerbation (AE) were assessed using multivariable models. The discovery and validation cohorts included 361 (mean age, 67 years; 97.5% men) and 112 patients (mean age, 67 years; 93.7% men), respectively. In the discovery cohort, 220 (60.9%) had a history of at least one AE and 59 (16.3%) died during follow-up, and 18 (16.1%) died in the validation cohort. Bronchiectasis score was independently associated with increased mortality (discovery: adjusted HR, 1.86 [95% CI: 1.08-3.18]; validation: HR, 5.42 [95% CI: 1.97-14.92]). The score was also associated with risk of any AE, severe AE, and shorter time to first AE (for all, p < 0.05). In patients with COPD, the quantified extent of bronchiectasis using AI-based CT quantification of the bronchial tapering ratio was associated with all-cause mortality and the risk of AE over time. Question Can AI-based CT quantification of bronchial tapering reliably assess bronchiectasis relevant to clinical outcomes in patients with COPD? Findings Scores from this AI-based method of automatically quantifying the extent of whole lung bronchiectasis were independently associated with all-cause mortality and risk of AEs in COPD patients. Clinical relevance AI-based bronchiectasis analysis on CT may shift clinical research toward more objective, quantitative assessment methods and support risk stratification and management in COPD, highlighting its potential to enhance clinically relevant imaging evaluation.

Classifiers Combined with DenseNet Models for Lung Cancer Computed Tomography Image Classification: A Comparative Analysis.

Mahmoud MA, Wu S, Su R, Wen Y, Liu S, Guan Y

pubmed logopapersAug 26 2025
Lung cancer remains a leading cause of cancer-related mortality worldwide. While deep learning approaches show promise in medical imaging, comprehensive comparisons of classifier combinations with DenseNet architectures for lung cancer classification are limited. The study investigates the performance of different classifier combinations, Support Vector Machine (SVM), Artificial Neural Network (ANN), and Multi-Layer Perceptron (MLP), with DenseNet architectures for lung cancer classification using chest CT scan images. A comparative analysis was conducted on 1,000 chest CT scan images comprising Adenocarcinoma, Large Cell Carcinoma, Squamous Cell Carcinoma, and normal tissue samples. Three DenseNet variants (DenseNet-121, DenseNet-169, DenseNet-201) were combined with three classifiers: SVM, ANN, and MLP. Performance was evaluated using accuracy, Area Under the Curve (AUC), precision, recall, specificity, and F1- score with an 80-20 train-test split. The optimal model achieved 92% training accuracy and 83% test accuracy. Performance across models ranged from 81% to 92% for training accuracy and 73% to 83% for test accuracy. The most balanced combination demonstrated robust results (training: 85% accuracy, 0.99 AUC; test: 79% accuracy, 0.95 AUC) with minimal overfitting. Deep learning approaches effectively categorize chest CT scans for lung cancer detection. The MLP-DenseNet-169 combination's 83% test accuracy represents a promising benchmark. Limitations include retrospective design and a limited sample size from a single source. This evaluation demonstrates the effectiveness of combining DenseNet architectures with different classifiers for lung cancer CT classification. The MLP-DenseNet-169 achieved optimal performance, while SVM-DenseNet-169 showed superior stability, providing valuable benchmarks for automated lung cancer detection systems.
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