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Development of a No-Reference CT Image Quality Assessment Method Using RadImageNet Pre-trained Deep Learning Models.

Ohashi K, Nagatani Y, Yamazaki A, Yoshigoe M, Iwai K, Uemura R, Shimomura M, Tanimura K, Ishida T

pubmed logopapersMay 27 2025
Accurate assessment of computed tomography (CT) image quality is crucial for ensuring diagnostic accuracy, optimizing imaging protocols, and preventing excessive radiation exposure. In clinical settings, where high-quality reference images are often unavailable, developing no-reference image quality assessment (NR-IQA) methods is essential. Recently, CT-NR-IQA methods using deep learning have been widely studied; however, significant challenges remain in handling multiple degradation factors and accurately reflecting real-world degradations. To address these issues, we propose a novel CT-NR-IQA method. Our approach utilizes a dataset that combines two degradation factors (noise and blur) to train convolutional neural network (CNN) models capable of handling multiple degradation factors. Additionally, we leveraged RadImageNet pre-trained models (ResNet50, DenseNet121, InceptionV3, and InceptionResNetV2), allowing the models to learn deep features from large-scale real clinical images, thus enhancing adaptability to real-world degradations without relying on artificially degraded images. The models' performances were evaluated by measuring the correlation between the subjective scores and predicted image quality scores for both artificially degraded and real clinical image datasets. The results demonstrated positive correlations between the subjective and predicted scores for both datasets. In particular, ResNet50 showed the best performance, with a correlation coefficient of 0.910 for the artificially degraded images and 0.831 for the real clinical images. These findings indicate that the proposed method could serve as a potential surrogate for subjective assessment in CT-NR-IQA.

Multicentre evaluation of deep learning CT autosegmentation of the head and neck region for radiotherapy.

Pang EPP, Tan HQ, Wang F, Niemelä J, Bolard G, Ramadan S, Kiljunen T, Capala M, Petit S, Seppälä J, Vuolukka K, Kiitam I, Zolotuhhin D, Gershkevitsh E, Lehtiö K, Nikkinen J, Keyriläinen J, Mokka M, Chua MLK

pubmed logopapersMay 27 2025
This is a multi-institutional study to evaluate a head-and-neck CT auto-segmentation software across seven institutions globally. 11 lymph node levels and 7 organs-at-risk contours were evaluated in a two-phase study design. Time savings were measured in both phases, and the inter-observer variability across the seven institutions was quantified in phase two. Overall time savings were found to be 42% in phase one and 49% in phase two. Lymph node levels IA, IB, III, IVA, and IVB showed no significant time savings, with some centers reporting longer editing times than manual delineation. All the edited ROIs showed reduced inter-observer variability compared to manual segmentation. Our study shows that auto-segmentation plays a crucial role in harmonizing contouring practices globally. However, the clinical benefits of auto-segmentation software vary significantly across ROIs and between clinics. To maximize its potential, institution-specific commissioning is required to optimize the clinical benefits.

Development of an Open-Source Algorithm for Automated Segmentation in Clinician-Led Paranasal Sinus Radiologic Research.

Darbari Kaul R, Zhong W, Liu S, Azemi G, Liang K, Zou E, Sacks PL, Thiel C, Campbell RG, Kalish L, Sacks R, Di Ieva A, Harvey RJ

pubmed logopapersMay 27 2025
Artificial Intelligence (AI) research needs to be clinician led; however, expertise typically lies outside their skill set. Collaborations exist but are often commercially driven. Free and open-source computational algorithms and software expertise are required for meaningful clinically driven AI medical research. Deep learning algorithms automate segmenting regions of interest for analysis and clinical translation. Numerous studies have automatically segmented paranasal sinus computed tomography (CT) scans; however, openly accessible algorithms capturing the sinonasal cavity remain scarce. The purpose of this study was to validate and provide an open-source segmentation algorithm for paranasal sinus CTs for the otolaryngology research community. A cross-sectional comparative study was conducted with a deep learning algorithm, UNet++, modified for automatic segmentation of paranasal sinuses CTs and "ground-truth" manual segmentations. A dataset of 100 paranasal sinuses scans was manually segmented, with an 80/20 training/testing split. The algorithm is available at https://github.com/rheadkaul/SinusSegment. Primary outcomes included the Dice similarity coefficient (DSC) score, Intersection over Union (IoU), Hausdorff distance (HD), sensitivity, specificity, and visual similarity grading. Twenty scans representing 7300 slices were assessed. The mean DSC was 0.87 and IoU 0.80, with HD 33.61 mm. The mean sensitivity was 83.98% and specificity 99.81%. The median visual similarity grading score was 3 (good). There were no statistically significant differences in outcomes with normal or diseased paranasal sinus CTs. Automatic segmentation of CT paranasal sinuses yields good results when compared with manual segmentation. This study provides an open-source segmentation algorithm as a foundation and gateway for more complex AI-based analysis of large datasets.

Dual-energy CT combined with histogram parameters in the assessment of perineural invasion in colorectal cancer.

Wang Y, Tan H, Li S, Long C, Zhou B, Wang Z, Cao Y

pubmed logopapersMay 27 2025
The purpose is to evaluate the predictive value of dual-energy CT (DECT) combined with histogram parameters and a clinical prediction model for perineural invasion (PNI) in colorectal cancer (CRC). We retrospectively analyzed clinical and imaging data from 173 CRC patients who underwent preoperative DECT-enhanced scanning at two centers. Data from Qinghai University Affiliated Hospital (n = 120) were randomly divided into training and validation sets, while data from Lanzhou University Second Hospital (n = 53) served as the external validation set. Regions of interest (ROIs) were delineated to extract spectral and histogram parameters, and multivariate logistic regression identified optimal predictors. Six machine learning models-support vector machine (SVM), decision tree (DT), random forest (RF), logistic regression (LR), k-nearest neighbors (KNN), and extreme gradient boosting (XGBoost)-were constructed. Model performance and clinical utility were assessed using receiver operating characteristic (ROC) curves, calibration curves, and decision curve analysis (DCA). Four independent predictive factors were identified through multivariate analysis: entropy, CT40<sub>KeV</sub>, CEA, and skewness. Among the six classifier models, RF model demonstrated the best performance in the training set (AUC = 0.918, 95% CI: 0.862-0.969). In the validation set, RF outperformed other models (AUC = 0.885, 95% CI: 0.772-0.972). Notably, in the external validation set, the XGBoost model achieved the highest performance (AUC = 0.823, 95% CI: 0.672-0.945). Dual-energy CT-based combined with histogram parameters and clinical prediction modeling can be effectively used for preoperative noninvasive assessment of perineural invasion in colorectal cancer.

A Left Atrial Positioning System to Enable Follow-Up and Cohort Studies.

Mehringer NJ, McVeigh ER

pubmed logopapersMay 27 2025
We present a new algorithm to automatically convert 3-dimensional left atrium surface meshes into a standard 2-dimensional space: a Left Atrial Positioning System (LAPS). Forty-five contrast-enhanced 4- dimensional computed tomography datasets were collected from 30 subjects. The left atrium volume was segmented using a trained neural network and converted into a surface mesh. LAPS coordinates were calculated on each mesh by computing lines of longitude and latitude on the surface of the mesh with reference to the center of the posterior wall and the mitral valve. LAPS accuracy was evaluated with one-way transfer of coordinates from a template mesh to a synthetic ground truth, which was created by registering the template mesh and pre-calculated LAPS coordinates to a target mesh. The Euclidian distance error was measured between each test node and its ground truth location. The median point transfer error was 2.13 mm between follow-up scans of the same subject (n = 15) and 3.99 mm between different subjects (n = 30). The left atrium was divided into 24 anatomic regions and represented on a 2D square diagram. The Left Atrial Positioning System is fully automatic, accurate, robust to anatomic variation, and has flexible visualization for mapping data in the left atrium. This provides a framework for comparing regional LA surface data values in both follow-up and cohort studies.

Development and validation of a CT-based radiomics machine learning model for differentiating immune-related interstitial pneumonia.

Luo T, Guo J, Xi J, Luo X, Fu Z, Chen W, Huang D, Chen K, Xiao Q, Wei S, Wang Y, Du H, Liu L, Cai S, Dong H

pubmed logopapersMay 27 2025
Immune checkpoint inhibitor-related interstitial pneumonia (CIP) poses a diagnostic challenge due to its radiographic similarity to other pneumonias. We developed a non-invasive model using CT imaging to differentiate CIP from other pneumonias (OTP). We analyzed CIP and OTP patients after the immunotherapy from five medical centers between 2020 and 2023, and randomly divided into training and validation in 7:3. A radiomics model was developed using random forest analysis. A new model was then built by combining independent risk factors for CIP. The models were evaluated using ROC, calibration, and decision curve analysis. A total of 238 patients with pneumonia following immunotherapy were included, with 116 CIP and 122 OTP. After random allocation, the training cohort included 166 patients, and the validation included 72 patients. A radiomics model composed of 11 radiomic features was established using the random forest method, with an AUC of 0.833 for the training cohort and 0.821 for the validation. Univariate and multivariate logistic regression analysis revealed significant differences in smoking history, radiotherapy history, and radiomics score between CIP and OTP (p < 0.05). A new model was constructed based on these three factors and a nomogram was drawn. This model showed good calibration and net benefit in both the training and validation cohorts, with AUCs of 0.872 and 0.860, respectively. Using the random forest method of machine learning, we successfully constructed a CT-based radiomics CIP differential diagnostic model that can accurately, non-invasively, and rapidly provide clinicians with etiological support for pneumonia diagnosis.

Quantitative computed tomography imaging classification of cement dust-exposed patients-based Kolmogorov-Arnold networks.

Chau NK, Kim WJ, Lee CH, Chae KJ, Jin GY, Choi S

pubmed logopapersMay 27 2025
Occupational health assessment is critical for detecting respiratory issues caused by harmful exposures, such as cement dust. Quantitative computed tomography (QCT) imaging provides detailed insights into lung structure and function, enhancing the diagnosis of lung diseases. However, its high dimensionality poses challenges for traditional machine learning methods. In this study, Kolmogorov-Arnold networks (KANs) were used for the binary classification of QCT imaging data to assess respiratory conditions associated with cement dust exposure. The dataset comprised QCT images from 609 individuals, including 311 subjects exposed to cement dust and 298 healthy controls. We derived 141 QCT-based variables and employed KANs with two hidden layers of 15 and 8 neurons. The network parameters, including grid intervals, polynomial order, learning rate, and penalty strengths, were carefully fine-tuned. The performance of the model was assessed through various metrics, including accuracy, precision, recall, F1 score, specificity, and the Matthews Correlation Coefficient (MCC). A five-fold cross-validation was employed to enhance the robustness of the evaluation. SHAP analysis was applied to interpret the sensitive QCT features. The KAN model demonstrated consistently high performance across all metrics, with an average accuracy of 98.03 %, precision of 97.35 %, recall of 98.70 %, F1 score of 98.01 %, and specificity of 97.40 %. The MCC value further confirmed the robustness of the model in managing imbalanced datasets. The comparative analysis demonstrated that the KAN model outperformed traditional methods and other deep learning approaches, such as TabPFN, ANN, FT-Transformer, VGG19, MobileNets, ResNet101, XGBoost, SVM, random forest, and decision tree. SHAP analysis highlighted structural and functional lung features, such as airway geometry, wall thickness, and lung volume, as key predictors. KANs significantly improved the classification of QCT imaging data, enhancing early detection of cement dust-induced respiratory conditions. SHAP analysis supported model interpretability, enhancing its potential for clinical translation in occupational health assessments.

Advancing Limited-Angle CT Reconstruction Through Diffusion-Based Sinogram Completion

Jiaqi Guo, Santiago Lopez-Tapia, Aggelos K. Katsaggelos

arxiv logopreprintMay 26 2025
Limited Angle Computed Tomography (LACT) often faces significant challenges due to missing angular information. Unlike previous methods that operate in the image domain, we propose a new method that focuses on sinogram inpainting. We leverage MR-SDEs, a variant of diffusion models that characterize the diffusion process with mean-reverting stochastic differential equations, to fill in missing angular data at the projection level. Furthermore, by combining distillation with constraining the output of the model using the pseudo-inverse of the inpainting matrix, the diffusion process is accelerated and done in a step, enabling efficient and accurate sinogram completion. A subsequent post-processing module back-projects the inpainted sinogram into the image domain and further refines the reconstruction, effectively suppressing artifacts while preserving critical structural details. Quantitative experimental results demonstrate that the proposed method achieves state-of-the-art performance in both perceptual and fidelity quality, offering a promising solution for LACT reconstruction in scientific and clinical applications.

The extent of Skeletal muscle wasting in prolonged critical illness and its association with survival: insights from a retrospective single-center study.

Kolck J, Hosse C, Fehrenbach U, Beetz NL, Auer TA, Pille C, Geisel D

pubmed logopapersMay 26 2025
Muscle wasting in critically ill patients, particularly those with prolonged hospitalization, poses a significant challenge to recovery and long-term outcomes. The aim of this study was to characterize long-term muscle wasting trajectories in ICU patients with acute respiratory distress syndrome (ARDS) due to COVID-19 and acute pancreatitis (AP), to evaluate correlations between muscle wasting and patient outcomes, and to identify clinically feasible thresholds that have the potential to enhance patient care strategies. A collective of 154 ICU patients (100 AP and 54 COVID-19 ARDS) with a minimum ICU stay of 10 days and at least three abdominal CT scans were retrospectively analyzed. AI-driven segmentation of CT scans quantified changes in psoas muscle area (PMA). A mixed model analysis was used to assess the correlation between mortality and muscle wasting, Cox regression was applied to identify potential predictors of survival. Muscle loss rates, survival thresholds and outcome correlations were assessed using Kaplan-Meier and receiver operating characteristic (ROC) analyses. Muscle loss in ICU patients was most pronounced in the first two weeks, peaking at -2.42% and - 2.39% psoas muscle area (PMA) loss per day in weeks 1 and 2, respectively, followed by a progressive decline. The median total PMA loss was 48.3%, with significantly greater losses in non-survivors. Mixed model analysis confirmed correlation of muscle wasting with mortality. Cox regression identified visceral adipose tissue (VAT), sequential organ failure assessment (SOFA) score and muscle wasting as significant risk factors, while increased skeletal muscle area (SMA) was protective. ROC and Kaplan-Meier analyses showed strong correlations between PMA loss thresholds and survival, with daily loss > 4% predicting the worst survival (39.7%). To our knowledge, This is the first study to highlight the substantial progression of muscle wasting in prolonged hospitalized ICU patients. The mortality-related thresholds for muscle wasting rates identified in this study may provide a basis for clinical risk stratification. Future research should validate these findings in larger cohorts and explore strategies to mitigate muscle loss. Not applicable.
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