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The Role of Computed Tomography and Artificial Intelligence in Evaluating the Comorbidities of Chronic Obstructive Pulmonary Disease: A One-Stop CT Scanning for Lung Cancer Screening.

Lin X, Zhang Z, Zhou T, Li J, Jin Q, Li Y, Guan Y, Xia Y, Zhou X, Fan L

pubmed logopapersJan 1 2025
Chronic obstructive pulmonary disease (COPD) is a major cause of morbidity and mortality worldwide. Comorbidities in patients with COPD significantly increase morbidity, mortality, and healthcare costs, posing a significant burden on the management of COPD. Given the complex clinical manifestations and varying severity of COPD comorbidities, accurate diagnosis and evaluation are particularly important in selecting appropriate treatment options. With the development of medical imaging technology, AI-based chest CT, as a noninvasive imaging modality, provides a detailed assessment of COPD comorbidities. Recent studies have shown that certain radiographic features on chest CT can be used as alternative markers of comorbidities in COPD patients. CT-based radiomics features provided incremental predictive value than clinical risk factors only, predicting an AUC of 0.73 for COPD combined with CVD. However, AI has inherent limitations such as lack of interpretability, and further research is needed to improve them. This review evaluates the progress of AI technology combined with chest CT imaging in COPD comorbidities, including lung cancer, cardiovascular disease, osteoporosis, sarcopenia, excess adipose depots, and pulmonary hypertension, with the aim of improving the understanding of imaging and the management of COPD comorbidities for the purpose of improving disease screening, efficacy assessment, and prognostic evaluation.

Refining CT image analysis: Exploring adaptive fusion in U-nets for enhanced brain tissue segmentation.

Chen BC, Shen CY, Chai JW, Hwang RH, Chiang WC, Chou CH, Liu WM

pubmed logopapersJan 1 2025
Non-contrast Computed Tomography (NCCT) quickly diagnoses acute cerebral hemorrhage or infarction. However, Deep-Learning (DL) algorithms often generate false alarms (FA) beyond the cerebral region. We introduce an enhanced brain tissue segmentation method for infarction lesion segmentation (ILS). This method integrates an adaptive result fusion strategy to confine the search operation within cerebral tissue, effectively reducing FAs. By leveraging fused brain masks, DL-based ILS algorithms focus on pertinent radiomic correlations. Various U-Net models underwent rigorous training, with exploration of diverse fusion strategies. Further refinement entailed applying a 9x9 Gaussian filter with unit standard deviation followed by binarization to mitigate false positives. Performance evaluation utilized Intersection over Union (IoU) and Hausdorff Distance (HD) metrics, complemented by external validation on a subset of the COCO dataset. Our study comprised 20 ischemic stroke patients (14 males, 4 females) with an average age of 68.9 ± 11.7 years. Fusion with UNet2+ and UNet3 + yielded an IoU of 0.955 and an HD of 1.33, while fusion with U-net, UNet2 + , and UNet3 + resulted in an IoU of 0.952 and an HD of 1.61. Evaluation on the COCO dataset demonstrated an IoU of 0.463 and an HD of 584.1 for fusion with UNet2+ and UNet3 + , and an IoU of 0.453 and an HD of 728.0 for fusion with U-net, UNet2 + , and UNet3 + . Our adaptive fusion strategy significantly diminishes FAs and enhances the training efficacy of DL-based ILS algorithms, surpassing individual U-Net models. This methodology holds promise as a versatile, data-independent approach for cerebral lesion segmentation.

Volumetric atlas of the rat inner ear from microCT and iDISCO+ cleared temporal bones.

Cossellu D, Vivado E, Batti L, Gantar I, Pizzala R, Perin P

pubmed logopapersJan 1 2025
Volumetric atlases are an invaluable tool in neuroscience and otolaryngology, greatly aiding experiment planning and surgical interventions, as well as the interpretation of experimental and clinical data. The rat is a major animal model for hearing and balance studies, and a detailed volumetric atlas for the rat central auditory system (Waxholm) is available. However, the Waxholm rat atlas only contains a low-resolution inner ear featuring five structures. In the present work, we segmented and annotated 34 structures in the rat inner ear, yielding a detailed volumetric inner ear atlas which can be integrated with the Waxholm rat brain atlas. We performed iodine-enhanced microCT and iDISCO+-based clearing and fluorescence lightsheet microscopy imaging on a sample of rat temporal bones. Image stacks were segmented in a semiautomated way, and 34 inner ear volumes were reconstructed from five samples. Using geometrical morphometry, high-resolution segmentations obtained from lightsheet and microCT stacks were registered into the coordinate system of the Waxholm rat atlas. Cleared sample autofluorescence was used for the reconstruction of most inner ear structures, including fluid-filled compartments, nerves and sensory epithelia, blood vessels, and connective tissue structures. Image resolution allowed reconstruction of thin ducts (reuniting, saccular and endolymphatic), and the utriculoendolymphatic valve. The vestibulocochlear artery coursing through bone was found to be associated to the reuniting duct, and to be visible both in cleared and microCT samples, thus allowing to infer duct location from microCT scans. Cleared labyrinths showed minimal shape distortions, as shown by alignment with microCT and Waxholm labyrinths. However, membranous labyrinths could display variable collapse of the superior division, especially the roof of canal ampullae, whereas the inferior division (saccule and cochlea) was well preserved, with the exception of Reissner's membrane that could display ruptures in the second cochlear turn. As an example of atlas use, the volumes reconstructed from segmentations were used to separate macrophage populations from the spiral ganglion, auditory neuron dendrites, and Organ of Corti. We have reconstructed 34 structures from the rat temporal bone, which are available as both image stacks and printable 3D objects in a shared repository for download. These can be used for teaching, localizing cells or other features within the ear, modeling auditory and vestibular sensory physiology and training of automated segmentation machine learning tools.
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