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Research on a deep learning-based model for measurement of X-ray imaging parameters of atlantoaxial joint.

Wu Y, Zheng Y, Zhu J, Chen X, Dong F, He L, Zhu J, Cheng G, Wang P, Zhou S

pubmed logopapersJul 10 2025
To construct a deep learning-based SCNet model, in order to automatically measure X-ray imaging parameters related to atlantoaxial subluxation (AAS) in cervical open-mouth view radiographs, and the accuracy and reliability of the model were evaluated. A total of 1973 cervical open-mouth view radiographs were collected from picture archiving and communication system (PACS) of two hospitals(Hospitals A and B). Among them, 365 images of Hospital A were randomly selected as the internal test dataset for evaluating the model's performance, and the remaining 1364 images of Hospital A were used as the training dataset and validation dataset for constructing the model and tuning the model hyperparameters, respectively. The 244 images of Hospital B were used as an external test dataset to evaluate the robustness and generalizability of our model. The model identified and marked landmarks in the images for the parameters of the lateral atlanto-dental space (LADS), atlas lateral mass inclination (ALI), lateral mass width (LW), axis spinous process deviation distance (ASDD). The measured results of landmarks on the internal test dataset and external test dataset were compared with the mean values of manual measurement by three radiologists as the reference standard. Percentage of correct key-points (PCK), intra-class correlation coefficient (ICC), mean absolute error (MAE), Pearson correlation coefficient (r), mean square error (MSE), root mean square error (RMSE) and Bland-Altman plot were used to evaluate the performance of the SCNet model. (1) Within the 2 mm distance threshold, the PCK of the SCNet model predicted landmarks in internal test dataset images was 98.6-99.7%, and the PCK in the external test dataset images was 98-100%. (2) In the internal test dataset, for the parameters LADS, ALI, LW, and ASDD, there were strong correlation and consistency between the SCNet model predictions and the manual measurements (ICC = 0.80-0.96, r = 0.86-0.96, MAE = 0.47-2.39 mm/°, MSE = 0.38-8.55 mm<sup>2</sup>/°<sup>2</sup>, RMSE = 0.62-2.92 mm/°). (3) The same four parameters also showed strong correlation and consistency between SCNet and manual measurements in the external test dataset (ICC = 0.81-0.91, r = 0.82-0.91, MAE = 0.46-2.29 mm/°, MSE = 0.29-8.23mm<sup>2</sup>/°<sup>2</sup>, RMSE = 0.54-2.87 mm/°). The SCNet model constructed based on deep learning algorithm in this study can accurately identify atlantoaxial vertebral landmarks in cervical open-mouth view radiographs and automatically measure the AAS-related imaging parameters. Furthermore, the independent external test set demonstrates that the model exhibits a certain degree of robustness and generalization capability under meet radiographic standards.

A deep learning-based clinical decision support system for glioma grading using ensemble learning and knowledge distillation.

Liu Y, Shi Z, Xiao C, Wang B

pubmed logopapersJul 10 2025
Gliomas are the most common malignant primary brain tumors, and grading their severity, particularly the diagnosis of low-grade gliomas, remains a challenging task for clinicians and radiologists. With advancements in deep learning and medical image processing technologies, the development of Clinical Decision Support Systems (CDSS) for glioma grading offers significant benefits for clinical treatment. This study proposes a CDSS for glioma grading, integrating a novel feature extraction framework. The method is based on combining ensemble learning and knowledge distillation: teacher models were constructed through ensemble learning, while uncertainty-weighted ensemble averaging is applied during student model training to refine knowledge transfer. This approach bridges the teacher-student performance gap, enhancing grading accuracy, reliability, and clinical applicability with lightweight deployment. Experimental results show 85.96 % Accuracy (5.2 % improvement over baseline), with Precision (83.90 %), Recall (87.40 %), and F1-score (83.90 %) increasing by 7.5 %, 5.1 %, and 5.1 % respectively. The teacher-student performance gap is reduced to 3.2 %, confirming effectiveness. Furthermore, the developed CDSS not only ensures rapid and accurate glioma grading but also includes critical features influencing the grading results, seamlessly integrating a methodology for generating comprehensive diagnostic reports. Consequently, the glioma grading CDSS represents a practical clinical decision support tool capable of delivering accurate and efficient auxiliary diagnostic decisions for physicians and patients.

PediMS: A Pediatric Multiple Sclerosis Lesion Segmentation Dataset.

Popa M, Vișa GA, Șofariu CR

pubmed logopapersJul 10 2025
Multiple Sclerosis (MS) is a chronic autoimmune disease that primarily affects the central nervous system and is predominantly diagnosed in adults, making pediatric cases rare and underrepresented in medical research. This paper introduces the first publicly available MRI dataset specifically dedicated to pediatric multiple sclerosis lesion segmentation. The dataset comprises longitudinal MRI scans from 9 pediatric patients, each with between one and six timepoints, with a total of 28 MRI scans. It includes T1-weighted (MPRAGE), T2-weighted, and FLAIR sequences. Additionally, it provides clinical data and initial symptoms for each patient, offering valuable insights into disease progression. Lesion segmentation was performed by senior experts, ensuring high-quality annotations. To demonstrate the dataset's reliability and utility, we evaluated two deep learning models, achieving competitive segmentation performance. This dataset aims to advance research in pediatric MS, improve lesion segmentation models, and contribute to federated learning approaches.

MRI-based interpretable clinicoradiological and radiomics machine learning model for preoperative prediction of pituitary macroadenomas consistency: a dual-center study.

Liang M, Wang F, Yang Y, Wen L, Wang S, Zhang D

pubmed logopapersJul 9 2025
To establish an interpretable and non-invasive machine learning (ML) model using clinicoradiological predictors and magnetic resonance imaging (MRI) radiomics features to predict the consistency of pituitary macroadenomas (PMAs) preoperatively. Total 350 patients with PMA (272 from Xinqiao Hospital of Army Medical University and 78 from Daping Hospital of Army Medical University) were stratified and randomly divided into training and test cohorts in a 7:3 ratio. The tumor consistency was classified as soft or firm. Clinicoradiological predictors were examined utilizing univariate and multivariate regression analyses. Radiomics features were selected employing the minimum redundancy maximum relevance (mRMR) and least absolute shrinkage and selection operator (LASSO) algorithms. Logistic regression (LR) and random forest (RF) classifiers were applied to construct the models. Receiver operating characteristic (ROC) curves and decision curve analyses (DCA) were performed to compare and validate the predictive capacities of the models. A comparative study of the area under the curve (AUC), accuracy (ACC), sensitivity (SEN), and specificity (SPE) was performed. The Shapley additive explanation (SHAP) was applied to investigate the optimal model's interpretability. The combined model predicted the PMAs' consistency more effectively than the clinicoradiological and radiomics models. Specifically, the LR-combined model displayed optimal prediction performance (test cohort: AUC = 0.913; ACC = 0.840). The SHAP-based explanation of the LR-combined model suggests that the wavelet-transformed and Laplacian of Gaussian (LoG) filter features extracted from T<sub>2</sub>WI and CE-T<sub>1</sub>WI occupy a dominant position. Meanwhile, the skewness of the original first-order features extracted from T<sub>2</sub>WI (T<sub>2</sub>WI_original_first-order_Skewness) demonstrated the most substantial contribution. An interpretable machine learning model incorporating clinicoradiological predictors and multiparametric MRI (mpMRI)-based radiomics features may predict PMAs consistency, enabling tailored and precise therapies for patients with PMA.

Altered hemispheric lateralization of cortico-basal ganglia-thalamic network associated with gene expression and neurotransmitter profiles as potential biomarkers for panic disorder.

Han Y, Yan H, Shan X, Li H, Liu F, Li P, Yuan Y, Lv D, Guo W

pubmed logopapersJul 9 2025
Functional brain lateralization, a key feature of the human brain that shows alterations in various mental disorders, remains poorly understood in panic disorder (PD), and its investigation may provide valuable insights into the neurobiological underpinnings of psychiatric conditions. This study investigates hemispheric lateralization in drug-naive patients with PD before and after treatment, explores its associations with gene expression and neurotransmitter profiles, and examines its utility for diagnosis and treatment outcome prediction. Fifty-eight patients and 85 healthy controls (HCs) were enrolled. Clinical assessments and resting-state functional magnetic resonance imaging scans were conducted before and after a 4-week paroxetine monotherapy. Intra-hemispheric functional connectivity strength (FCS), inter-hemispheric FCS, and parameter of asymmetry (PAS) were calculated. Imaging-transcriptomic and imaging-neurotransmitter correlation analyses were conducted. PAS was used in machine learning models for classification and treatment outcome prediction. Compared with HCs, patients exhibited enhanced intra-hemispheric FCS and decreased PAS in the caudate nucleus/pallidum and thalamus, with associated genes, dopamine and serotonin receptor densities, and vesicular acetylcholine transporter densities linking these lateralization alterations to neural signaling and synaptic function. FCS and PAS results were consistent across different correlation thresholds (0.15, 0.2, and 0.25). No significant changes in FCS or PAS were observed following treatment. PAS demonstrated excellent performance in classification (accuracy = 75.52 %) and treatment outcomes prediction (r = 0.763). Hemispheric lateralization in the cortico-basal ganglia-thalamic network was significantly altered in patients with PD, with these changes linked to disruptions in genes and neurotransmitter profiles which are associated with neural signal transduction and synaptic function. PAS shows promise as a biomarker for PD diagnosis and treatment outcome prediction.

Machine learning techniques for stroke prediction: A systematic review of algorithms, datasets, and regional gaps.

Soladoye AA, Aderinto N, Popoola MR, Adeyanju IA, Osonuga A, Olawade DB

pubmed logopapersJul 9 2025
Stroke is a leading cause of mortality and disability worldwide, with approximately 15 million people suffering strokes annually. Machine learning (ML) techniques have emerged as powerful tools for stroke prediction, enabling early identification of risk factors through data-driven approaches. However, the clinical utility and performance characteristics of these approaches require systematic evaluation. To systematically review and analyze ML techniques used for stroke prediction, systematically synthesize performance metrics across different prediction targets and data sources, evaluate their clinical applicability, and identify research trends focusing on patient population characteristics and stroke prevalence patterns. A systematic review was conducted following PRISMA guidelines. Five databases (Google Scholar, Lens, PubMed, ResearchGate, and Semantic Scholar) were searched for open-access publications on ML-based stroke prediction published between January 2013 and December 2024. Data were extracted on publication characteristics, datasets, ML methodologies, evaluation metrics, prediction targets (stroke occurrence vs. outcomes), data sources (EHR, imaging, biosignals), patient demographics, and stroke prevalence. Descriptive synthesis was performed due to substantial heterogeneity precluding quantitative meta-analysis. Fifty-eight studies were included, with peak publication output in 2021 (21 articles). Studies targeted three main prediction objectives: stroke occurrence prediction (n = 52, 62.7 %), stroke outcome prediction (n = 19, 22.9 %), and stroke type classification (n = 12, 14.4 %). Data sources included electronic health records (n = 48, 57.8 %), medical imaging (n = 21, 25.3 %), and biosignals (n = 14, 16.9 %). Systematic analysis revealed ensemble methods consistently achieved highest accuracies for stroke occurrence prediction (range: 90.4-97.8 %), while deep learning excelled in imaging-based applications. African populations, despite highest stroke mortality rates globally, were represented in fewer than 4 studies. ML techniques show promising results for stroke prediction. However, significant gaps exist in representation of high-risk populations and real-world clinical validation. Future research should prioritize population-specific model development and clinical implementation frameworks.

CTV-MIND: A cortical thickness-volume integrated individualized morphological network model to explore disease progression in temporal lobe epilepsy.

Liu X, Han J, Zhang X, Wei B, Xu L, Zhou Q, Wang Y, Lin Y, Zhang J

pubmed logopapersJul 9 2025
Temporal lobe epilepsy (TLE) is a progressive brain network disorder. Elucidating network reorganization and identifying disease progression-associated biomarkers are crucial for understanding pathological mechanisms, quantifying disease burden, and optimizing clinical strategies. This study aimed to investigate progressive changes in TLE by constructing a novel individualized morphological brain network based on T1-weighted structural magnetic resonance imaging (MRI). MRI data were collected from 34 postoperative seizure-free TLE patients and 28 age- and sex-matched healthy controls (HC), with patients divided into LONG-TERM and SHORT-TERM groups. Individualized morphological networks were constructed using the Morphometric INverse Divergence (MIND) framework by integrating cortical thickness and volume features (CTV-MIND). Network properties were then calculated and compared across groups to identify features potentially associated with disease progression. Results revealed progressive hub-node reorganization in CTV-MIND networks, with the LONG-TERM group showing increased connectivity in the lesion-side temporal lobe compared to SHORT-TERM and HC groups. The altered network node properties showed a significant correlation with local cortical atrophy. Incorporating identified network features into a machine learning-based brain age prediction model further revealed significantly elevated brain age in TLE. Notably, duration-related brain regions exerted a more significant and specific impact on premature brain aging in TLE than other regional combinations. Thus, prolonged duration may serve as an important contributor to the pathological aging observed in TLE. Our findings could help clinicians better identify abnormal brain trajectories in TLE and have the potential to facilitate the optimization of personalized treatment strategies.

Deep Brain Net: An Optimized Deep Learning Model for Brain tumor Detection in MRI Images Using EfficientNetB0 and ResNet50 with Transfer Learning

Daniel Onah, Ravish Desai

arxiv logopreprintJul 9 2025
In recent years, deep learning has shown great promise in the automated detection and classification of brain tumors from MRI images. However, achieving high accuracy and computational efficiency remains a challenge. In this research, we propose Deep Brain Net, a novel deep learning system designed to optimize performance in the detection of brain tumors. The model integrates the strengths of two advanced neural network architectures which are EfficientNetB0 and ResNet50, combined with transfer learning to improve generalization and reduce training time. The EfficientNetB0 architecture enhances model efficiency by utilizing mobile inverted bottleneck blocks, which incorporate depth wise separable convolutions. This design significantly reduces the number of parameters and computational cost while preserving the ability of models to learn complex feature representations. The ResNet50 architecture, pre trained on large scale datasets like ImageNet, is fine tuned for brain tumor classification. Its use of residual connections allows for training deeper networks by mitigating the vanishing gradient problem and avoiding performance degradation. The integration of these components ensures that the proposed system is both computationally efficient and highly accurate. Extensive experiments performed on publicly available MRI datasets demonstrate that Deep Brain Net consistently outperforms existing state of the art methods in terms of classification accuracy, precision, recall, and computational efficiency. The result is an accuracy of 88 percent, a weighted F1 score of 88.75 percent, and a macro AUC ROC score of 98.17 percent which demonstrates the robustness and clinical potential of Deep Brain Net in assisting radiologists with brain tumor diagnosis.

Evolution of CT perfusion software in stroke imaging: from deconvolution to artificial intelligence.

Gragnano E, Cocozza S, Rizzuti M, Buono G, Elefante A, Guida A, Marseglia M, Tarantino M, Manganelli F, Tortora F, Briganti F

pubmed logopapersJul 9 2025
Computed tomography perfusion (CTP) represents one of the main determinants in the decision-making strategy of stroke patients, being very useful in triaging these patients. The aim of this review is to describe the current knowledge and the future applications of AI in CTP. This review contains a short technical description of the CTP technique and how perfusion parameters are currently estimated and applied in clinical practice. We then provided a comprehensive literature review on the performance of CTP analysis software aimed at understanding whether possible differences between commercially available software might have a direct implication on neuroradiological patient stratification, and therefore on their clinical outcomes. An overview of past, present, and future of software used for CTP estimation, with an emphasis on those AI-based, is provided. Finally, future challenges regarding technical aspects and ethical considerations are discussed. In the current state, most of the use of AI in CTP estimation is limited to some technical steps of the processing pipeline, and especially in the correction of motion artifacts, with deconvolution methods that are still widely used to generate CTP-derived variables. Major drawbacks in AI implementation are still present, especially regarding the "black-box" nature of some models, technical workflow implementations, and the economic costs. In the future, the integration of AI with all the information available in clinical practice should fulfill the aim of developing patient-specific CTP maps, which will overcome the current limitations of threshold-based decision-making processes and will lead physicians to better patient selection and earlier and more efficient treatments. KEY POINTS: Question AI is a widely investigated field in neuroradiology, yet no comprehensive review is yet available on its role in CT perfusion (CTP) in stroke patients. Findings AI in CTP is mainly used for motion correction; future integration with clinical data could enable personalized stroke treatment, despite ethical and economic challenges. Clinical relevance To date, AI in CTP mainly finds applications in image motion correction; although some ethical, technical, and vendor standardization issues remain, integrating AI with clinical data in stroke patients promises a possible improvement in patient outcomes.

A machine learning model reveals invisible microscopic variation in acute ischaemic stroke (≤ 6 h) with non-contrast computed tomography.

Tan J, Xiao M, Wang Z, Wu S, Han K, Wang H, Huang Y

pubmed logopapersJul 9 2025
In most medical centers, particularly in primary hospitals, non-contrast computed tomography (NCCT) serves as the primary imaging modality for diagnosing acute ischemic stroke. However, due to the small density difference between the infarct and the surrounding normal brain tissue on NCCT images within the initial 6 h post-onset, it poses significant challenges in promptly and accurately positioning and quantifying the infarct at the early stage. To investigate whether a radiomics-based model using NCCT could effectively assess the risk of acute ischemic stroke (AIS). This study proposed a machine learning (ML) for infarct detection, enabling automated quantitative assessment of AIS lesions on NCCT images. In this retrospective study, NCCT images from 228 patients with AIS (< 6 h from onset) were included, and paired with MRI-diffusion-weighted imaging (DWI) images (attained within 1 to 7 days of onset). NCCT and DWI images were co-registered using the Elastix toolbox. The internal dataset (153 AIS patients) included 179 AIS VOIs and 153 non-AIS VOIs as the training and validation groups. Subsequent cases (75 patients) after 2021 served as the independent test set, comprising 94 AIS VOIs and 75 non-AIS VOIs. The random forest (RF) model demonstrated robust diagnostic performance across the training, validation, and independent test sets. The areas under the receiver operating characteristic (ROC) curves were 0.858 (95% CI: 0.808-0.908), 0.829 (95% CI: 0.748-0.910), and 0.789 (95% CI: 0.717-0.860), respectively. Accuracies were 79.399%, 77.778%, and 73.965%, while sensitivities were 81.679%, 77.083%, and 68.085%. Specificities were 76.471%, 78.431%, and 81.333%, respectively. NCCT-based radiomics combined with a machine learning model could discriminate between AIS and non-AIS patients within less than 6 h of onset. This approach holds promise for improving early stroke diagnosis and patient outcomes. Not applicable.
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