Accurate prediction of skeletal changes during orthodontic treatment in growing patients remains challenging due to significant individual variability in craniofacial growth and treatment responses. Conventional methods, such as support vector regression and multilayer perceptrons, require multiple sequential radiographs to achieve acceptable accuracy. However, they are limited by increased radiation exposure, susceptibility to landmark identification errors, and the lack of visually interpretable predictions. To overcome these limitations, this study explored advanced generative approaches, including denoising diffusion probabilistic models (DDPMs), latent diffusion models (LDMs), and ControlNet, to predict future cephalometric radiographs using minimal input data. We evaluated three diffusion-based models-a DDPM utilizing three sequential cephalometric images (3-input DDPM), a single-image DDPM (1-input DDPM), and a single-image LDM-and a vision-based generative model, ControlNet, conditioned on patient-specific attributes such as age, sex, and orthodontic treatment type. Quantitative evaluations demonstrated that the 3-input DDPM achieved the highest numerical accuracy, whereas the single-image LDM delivered comparable predictive performance with significantly reduced clinical requirements. ControlNet also exhibited competitive accuracy, highlighting its potential effectiveness in clinical scenarios. These findings indicate that the single-image LDM and ControlNet offer practical solutions for personalized orthodontic treatment planning, reducing patient visits and radiation exposure while maintaining robust predictive accuracy.

Medical image-language pre-training aims to align medical images with clinically relevant text to improve model performance on various downstream tasks. However, existing models often struggle with the variability and ambiguity inherent in medical data, limiting their ability to capture nuanced clinical information and uncertainty. This work introduces an uncertainty-aware medical image-text pre-training model that enhances generalization capabilities in medical image analysis. Building on previous methods and focusing on Chest X-Rays, our approach utilizes structured text reports generated by a large language model (LLM) to augment image data with clinically relevant context. These reports begin with a definition of the disease, followed by the `appearance' section to highlight critical regions of interest, and finally `observations' and `verdicts' that ground model predictions in clinical semantics. By modeling both inter- and intra-modal uncertainty, our framework captures the inherent ambiguity in medical images and text, yielding improved representations and performance on downstream tasks. Our model demonstrates significant advances in medical image-text pre-training, obtaining state-of-the-art performance on multiple downstream tasks.

Brain aging synthesis is a critical task with broad applications in clinical and computational neuroscience. The ability to predict the future structural evolution of a subject's brain from an earlier MRI scan provides valuable insights into aging trajectories. Yet, the high-dimensionality of data, subtle changes of structure across ages, and subject-specific patterns constitute challenges in the synthesis of the aging brain. To overcome these challenges, we propose NeuroAR, a novel brain aging simulation model based on generative autoregressive transformers. NeuroAR synthesizes the aging brain by autoregressively estimating the discrete token maps of a future scan from a convenient space of concatenated token embeddings of a previous and future scan. To guide the generation, it concatenates into each scale the subject's previous scan, and uses its acquisition age and the target age at each block via cross-attention. We evaluate our approach on both the elderly population and adolescent subjects, demonstrating superior performance over state-of-the-art generative models, including latent diffusion models (LDM) and generative adversarial networks, in terms of image fidelity. Furthermore, we employ a pre-trained age predictor to further validate the consistency and realism of the synthesized images with respect to expected aging patterns. NeuroAR significantly outperforms key models, including LDM, demonstrating its ability to model subject-specific brain aging trajectories with high fidelity.

Ultrasound is widely used in clinical care, yet standard deep learning methods often struggle with full video analysis due to non-standardized acquisition and operator bias. We offer a new perspective on ultrasound video analysis through implicit neural representations (INRs). We build on Functa, an INR framework in which each image is represented by a modulation vector that conditions a shared neural network. However, its extension to the temporal domain of medical videos remains unexplored. To address this gap, we propose VidFuncta, a novel framework that leverages Functa to encode variable-length ultrasound videos into compact, time-resolved representations. VidFuncta disentangles each video into a static video-specific vector and a sequence of time-dependent modulation vectors, capturing both temporal dynamics and dataset-level redundancies. Our method outperforms 2D and 3D baselines on video reconstruction and enables downstream tasks to directly operate on the learned 1D modulation vectors. We validate VidFuncta on three public ultrasound video datasets -- cardiac, lung, and breast -- and evaluate its downstream performance on ejection fraction prediction, B-line detection, and breast lesion classification. These results highlight the potential of VidFuncta as a generalizable and efficient representation framework for ultrasound videos. Our code is publicly available under https://github.com/JuliaWolleb/VidFuncta_public.

Immunotherapy, in particular checkpoint blockade, has revolutionized the treatment of many advanced cancers. Imaging plays a critical role in assessing both treatment response and the development of immune toxicities. Both conventional imaging and molecular imaging techniques can be used to evaluate multisystemic immune related adverse events (irAEs), including thoracic, abdominal and neurologic irAEs. As artificial intelligence (AI) proliferates in medical imaging, radiologic assessment of irAEs will become more efficient, improving the diagnosis, prognosis, and management of patients affected by immune-related toxicities. This review addresses some of the advancements in medical imaging including the potential future role of radiomics in evaluating irAEs, which may facilitate clinical decision-making and improvements in patient care.

Currently, there is no guidance for personalized choice of induction chemotherapy (IC) regimens (TPF, docetaxel + cisplatin + 5-Fu; or GP, gemcitabine + cisplatin) for locoregionally advanced nasopharyngeal carcinoma (LA-NPC). This study aimed to develop deep learning models for IC response prediction in LA-NPC. For 1438 LA-NPC patients, pretreatment magnetic resonance imaging (MRI) scans and complete biological response (cBR) information after 3 cycles of IC were collected from two centers. All models were trained in 969 patients (TPF: 548, GP: 421), and internally validated in 243 patients (TPF: 138, GP: 105), then tested on an internal dataset of 226 patients (TPF: 125, GP: 101). MRI models for the TPF and GP cohorts were constructed to predict cBR from MRI using radiomics and graph convolutional network (GCN). The MRI-Clinical models were built based on both MRI and clinical parameters. The MRI models and MRI-Clinical models achieved high discriminative accuracy in both TPF cohorts (MRI model: AUC, 0.835; MRI-Clinical model: AUC, 0.838) and GP cohorts (MRI model: AUC, 0.764; MRI-Clinical model: AUC, 0.777). The MRI-Clinical models also showed good performance in the risk stratification. The survival curve revealed that the 3-year disease-free survival of the high-sensitivity group was better than that of the low-sensitivity group in both the TPF and GP cohorts. An online tool guiding personalized choice of IC regimen was developed based on MRI-Clinical models. Our radiomics and GCN-based IC response prediction tool has robust predictive performance and may provide guidance for personalized treatment.

This study aimed to develop an interpretable machine learning model integrating delayed-phase contrast-enhanced CT radiomics with clinical features for noninvasive prediction of pathological grading in appendiceal pseudomyxoma peritonei (PMP), using Shapley Additive Explanations (SHAP) for model interpretation. This retrospective study analyzed 158 pathologically confirmed PMP cases (85 low-grade, 73 high-grade) from January 4, 2015 to April 30, 2024. Comprehensive clinical data including demographic characteristics, serum tumor markers (CEA, CA19-9, CA125, D-dimer, CA-724, CA-242), and CT-peritoneal cancer index (CT-PCI) were collected. Radiomics features were extracted from preoperative contrast-enhanced CT scans using standardized protocols. After rigorous feature selection and five-fold cross-validation, we developed three predictive models: clinical-only, radiomics-only, and a combined clinical-radiomics model using logistic regression. Model performance was evaluated through ROC analysis (AUC), Delong test, decision curve analysis (DCA), and Brier score, with SHAP values providing interpretability. The combined model demonstrated superior performance, achieving AUCs of 0.91 (95%CI:0.86-0.95) and 0.88 (95%CI:0.82-0.93) in training and testing sets respectively, significantly outperforming standalone models (P < 0.05). DCA confirmed greater clinical utility across most threshold probabilities, with favorable Brier scores (training:0.124; testing:0.142) indicating excellent calibration. SHAP analysis identified the top predictive features: wavelet-LHH_glcm_InverseVariance (radiomics), original_shape_Elongation (radiomics), and CA-199 (clinical). Our SHAP-interpretable combined model provides an accurate, noninvasive tool for PMP grading, facilitating personalized treatment decisions. The integration of radiomics and clinical data demonstrates superior predictive performance compared to conventional approaches, with potential to improve patient outcomes.

Magnetic resonance imaging (MRI) is a cornerstone of neuroimaging, providing unparalleled soft-tissue contrast. However, its clinical utility is often limited by long acquisition times, which contribute to motion artifacts, patient discomfort, and increased costs. Although traditional acceleration techniques, such as parallel imaging and compressed sensing help reduce scan times, they may reduce signal-to-noise ratio (SNR) and introduce artifacts. The advent of deep learning-based image reconstruction (DLBIR) may help in several ways to reduce scan times while preserving or improving image quality. Various DLBIR techniques are currently available through different vendors, with claimed reductions in gradient times up to 85% while maintaining or enhancing lesion conspicuity, improved noise suppression and diagnostic accuracy. The evolution of DLBIR from 2D to 3D acquisitions, coupled with advancements in self-supervised learning, further expands its capabilities and clinical applicability. Despite these advancements, challenges persist in generalizability across scanners and imaging conditions, susceptibility to artifacts and potential alterations in pathology representation. Additionally, limited data on training, underlying algorithms and clinical validation of these vendor-specific closed-source algorithms pose barriers to end-user trust and widespread adoption. This review explores the current applications of DLBIR in neuroimaging, vendor-driven implementations, and emerging trends that may impact accelerated MRI acquisitions.ABBREVIATIONS: PI＝ parallel imaging; CS＝ compressed sensing; DLBIR = deep learning-based image reconstruction; AI= artificial intelligence; DR =. Deep resolve; ACS = Artificial-intelligence-assisted compressed sensing.

Background: Manual extraction of pancreatic cystic lesion (PCL) features from radiology reports is labor-intensive, limiting large-scale studies needed to advance PCL research. Purpose: To develop and evaluate large language models (LLMs) that automatically extract PCL features from MRI/CT reports and assign risk categories based on guidelines. Materials and Methods: We curated a training dataset of 6,000 abdominal MRI/CT reports (2005-2024) from 5,134 patients that described PCLs. Labels were generated by GPT-4o using chain-of-thought (CoT) prompting to extract PCL and main pancreatic duct features. Two open-source LLMs were fine-tuned using QLoRA on GPT-4o-generated CoT data. Features were mapped to risk categories per institutional guideline based on the 2017 ACR White Paper. Evaluation was performed on 285 held-out human-annotated reports. Model outputs for 100 cases were independently reviewed by three radiologists. Feature extraction was evaluated using exact match accuracy, risk categorization with macro-averaged F1 score, and radiologist-model agreement with Fleiss' Kappa. Results: CoT fine-tuning improved feature extraction accuracy for LLaMA (80% to 97%) and DeepSeek (79% to 98%), matching GPT-4o (97%). Risk categorization F1 scores also improved (LLaMA: 0.95; DeepSeek: 0.94), closely matching GPT-4o (0.97), with no statistically significant differences. Radiologist inter-reader agreement was high (Fleiss' Kappa = 0.888) and showed no statistically significant difference with the addition of DeepSeek-FT-CoT (Fleiss' Kappa = 0.893) or GPT-CoT (Fleiss' Kappa = 0.897), indicating that both models achieved agreement levels on par with radiologists. Conclusion: Fine-tuned open-source LLMs with CoT supervision enable accurate, interpretable, and efficient phenotyping for large-scale PCL research, achieving performance comparable to GPT-4o.

All-in-one medical image restoration (MedIR) aims to address multiple MedIR tasks using a unified model, concurrently recovering various high-quality (HQ) medical images (e.g., MRI, CT, and PET) from low-quality (LQ) counterparts. However, all-in-one MedIR presents significant challenges due to the heterogeneity across different tasks. Each task involves distinct degradations, leading to diverse information losses in LQ images. Existing methods struggle to handle these diverse information losses associated with different tasks. To address these challenges, we propose a latent diffusion-enhanced vector-quantized codebook prior and develop \textbf{DiffCode}, a novel framework leveraging this prior for all-in-one MedIR. Specifically, to compensate for diverse information losses associated with different tasks, DiffCode constructs a task-adaptive codebook bank to integrate task-specific HQ prior features across tasks, capturing a comprehensive prior. Furthermore, to enhance prior retrieval from the codebook bank, DiffCode introduces a latent diffusion strategy that utilizes the diffusion model's powerful mapping capabilities to iteratively refine the latent feature distribution, estimating more accurate HQ prior features during restoration. With the help of the task-adaptive codebook bank and latent diffusion strategy, DiffCode achieves superior performance in both quantitative metrics and visual quality across three MedIR tasks: MRI super-resolution, CT denoising, and PET synthesis.