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Spatial Prior-Guided Dual-Path Network for Thyroid Nodule Segmentation.

Pang C, Miao H, Zhang R, Liu Q, Lyu L

pubmed logopapersAug 12 2025
Accurate segmentation of thyroid nodules in ultrasound images is critical for clinical diagnosis but remains challenging due to low contrast and complex anatomical structures. Existing deep learning methods often rely solely on local nodule features, lacking anatomical prior knowledge of the thyroid region, which can result in misclassification of non-thyroid tissues, especially in low-quality scans. To address these issues, we propose a Spatial Prior-Guided Dual-Path Network that integrates a prior-aware encoder to model thyroid anatomical structures and a low-cost heterogeneous encoder to preserve fine-grained multi-scale features, enhancing both spatial detail and contextual awareness. To capture the diverse and irregular appearances of nodules, we design a CrossBlock module, which combines an efficient cross-attention mechanism with mixed-scale convolutional operations to enable global context modeling and local feature extraction. The network further employs a dual-decoder architecture, where one decoder learns thyroid region priors and the other focuses on accurate nodule segmentation. Gland-specific features are hierarchically refined and injected into the nodule decoder to enhance boundary delineation through anatomical guidance. Extensive experiments on the TN3K and MTNS datasets demonstrate that our method consistently outperforms state-of-the-art approaches, particularly in boundary precision and localization accuracy, offering practical value for preoperative planning and clinical decision-making.

Comparative analysis of tumor and mesorectum radiomics in predicting neoadjuvant chemoradiotherapy response in locally advanced rectal cancer.

Cantürk A, Yarol RC, Tasak AS, Gülmez H, Kadirli K, Bişgin T, Manoğlu B, Sökmen S, Öztop İ, Görken Bilkay İ, Sağol Ö, Sarıoğlu S, Barlık F

pubmed logopapersAug 12 2025
Neoadjuvant chemoradiotherapy (CRT) is known to increase sphincter preservation rates and decrease the risk of postoperative recurrence in patients with locally advanced rectal tumors. However, the response to CRT in patients with locally advanced rectal cancer (LARC) varies significantly. The objective of this study was to compare the performance of models based on radiomics features of the tumor alone, the mesorectum alone, and a combination of both in predicting tumor response to neoadjuvant CRT in LARC. This retrospective study included 101 patients with LARC. Patients were categorized as responders (modified Ryan score 0-1) and non-responders (modified Ryan score 2-3). Pre-CRT magnetic resonance imaging evaluations included tumor-T2 weighted imaging (T2WI), tumor-diffusion weighted imaging (DWI), tumor-apparent diffusion coefficient (ADC) maps, and mesorectum-T2WI. The first radiologist segmented the tumor and mesorectum from T2-weighted images, and the second radiologist performed tumor segmentation using DWI and ADC maps. Feature reproducibility was assessed by calculating the intraclass correlation coefficient (ICC) using a two-way mixed-effects model with absolute agreement for single measurements [ICC(3,1)]. Radiomic features with ICC values <0.60 were excluded from further analysis. Subsequently, the least absolute shrinkage and selection operator method was applied to select the most relevant radiomic features. The top five features with the highest coefficients were selected for model training. To address class imbalance between groups, the synthetic minority over-sampling technique was applied exclusively to the training folds during cross-validation. Thereafter, classification learner models were developed using 10-fold cross-validation to achieve the highest performance. The performance metrics of the final models, including accuracy, precision, recall, F1-score, and area under the receiver operating characteristic curve (AUC), were calculated to evaluate the classification performance. Among the 101 patients, 36 were classified as responders and 65 as non-responders. A total of 25 radiomic features from the tumor and 20 from the mesorectum were found to be statistically significant (<i>P</i> < 0.05). The AUC values for predicting treatment response were 0.781 for the tumor-only model (random forest), 0.726 for the mesorectum-only model (logistic regression), and 0.837 for the combined model (logistic regression). Radiomic features derived from both the tumor and mesorectum demonstrated complementary prognostic value in predicting treatment response. The inclusion of mesorectal features substantially improved model performance, with the combined model achieving the highest AUC value. These findings highlight the added predictive contribution of the mesorectum as a key peritumoral structure in radiomics-based assessment. Currently, the response of locally advanced rectal tumors to neoadjuvant therapy cannot be reliably predicted using conventional methods. Recently, the significance of the mesorectum in predicting treatment response has gained attention, although the number of studies focusing on this area remains limited. In our study, we performed radiomics analyses of both the tumor tissue and the mesorectum to predict neoadjuvant treatment response.

Results of the 9th Scientific Workshop of the European Crohn's and Colitis Organisation (ECCO): Artificial Intelligence in Endoscopy, Radiology and Histology in IBD Diagnostics.

Mookhoek A, Sinonque P, Allocca M, Carter D, Ensari A, Iacucci M, Kopylov U, Verstockt B, Baumgart DC, Noor NM, El-Hussuna A, Sahnan K, Marigorta UM, Noviello D, Bossuyt P, Pellino G, Soriano A, de Laffolie J, Daperno M, Raine T, Cleynen I, Sebastian S

pubmed logopapersAug 12 2025
In this review, a comprehensive overview of the current state of artificial intelligence (AI) research in Inflammatory Bowel Disease (IBD) diagnostics in the domains of endoscopy, radiology and histology is presented. Moreover, key considerations for development of AI algorithms in medical image analysis are discussed. AI presents a potential breakthrough in real-time, objective and rapid endoscopic assessment, with implications for predicting disease progression. It is anticipated that, by harmonising multimodal data, AI will transform patient care through early diagnosis, accurate patient profiling and therapeutic response prediction. The ability of AI in cross-sectional medical imaging to improve diagnostic accuracy, automate and enable objective assessment of disease activity and predict clinical outcomes highlights its transformative potential. AI models have consistently outperformed traditional methods of image interpretation, particularly in complex areas such as differentiating IBD subtypes, identifying disease progression and complications. The use of AI in histology is a particularly dynamic research field. Implementation of AI algorithms in clinical practice is still lagging, a major hurdle being the lack of a digital workflow in many pathology institutes. Adoption is likely to start with implementation of automatic disease activity scoring. Beyond matching pathologist performance, algorithms may teach us more about IBD pathophysiology. While AI is set to substantially advance IBD diagnostics, various challenges such as heterogeneous datasets, retrospective designs and assessment of different endpoints must be addressed. Implementation of novel standards of reporting may drive an increase in research quality and overcome these obstacles.

CRCFound: A Colorectal Cancer CT Image Foundation Model Based on Self-Supervised Learning.

Yang J, Cai D, Liu J, Zhuang Z, Zhao Y, Wang FA, Li C, Hu C, Gai B, Chen Y, Li Y, Wang L, Gao F, Wu X

pubmed logopapersAug 12 2025
Accurate risk stratification is crucial for determining the optimal treatment plan for patients with colorectal cancer (CRC). However, existing deep learning models perform poorly in the preoperative diagnosis of CRC and exhibit limited generalizability, primarily due to insufficient annotated data. To address these issues, CRCFound, a self-supervised learning-based CT image foundation model for CRC is proposed. After pretraining on 5137 unlabeled CRC CT images, CRCFound can learn universal feature representations and provide efficient and reliable adaptability for various clinical applications. Comprehensive benchmark tests are conducted on six different diagnostic tasks and two prognosis tasks to validate the performance of the pretrained model. Experimental results demonstrate that CRCFound can easily transfer to most CRC tasks and exhibit outstanding performance and generalization ability. Overall, CRCFound can solve the problem of insufficient annotated data and perform well in a wide range of downstream tasks of CRC, making it a promising solution for accurate diagnosis and personalized treatment of CRC patients.

MRI-derived quantification of hepatic vessel-to-volume ratios in chronic liver disease using a deep learning approach.

Herold A, Sobotka D, Beer L, Bastati N, Poetter-Lang S, Weber M, Reiberger T, Mandorfer M, Semmler G, Simbrunner B, Wichtmann BD, Ba-Ssalamah SA, Trauner M, Ba-Ssalamah A, Langs G

pubmed logopapersAug 12 2025
We aimed to quantify hepatic vessel volumes across chronic liver disease stages and healthy controls using deep learning-based magnetic resonance imaging (MRI) analysis, and assess correlations with biomarkers for liver (dys)function and fibrosis/portal hypertension. We assessed retrospectively healthy controls, non-advanced and advanced chronic liver disease (ACLD) patients using a 3D U-Net model for hepatic vessel segmentation on portal venous phase gadoxetic acid-enhanced 3-T MRI. Total (TVVR), hepatic (HVVR), and intrahepatic portal vein-to-volume ratios (PVVR) were compared between groups and correlated with: albumin-bilirubin (ALBI) and "model for end-stage liver disease-sodium" (MELD-Na) score) and fibrosis/portal hypertension (Fibrosis-4 (FIB-4) Score, liver stiffness measurement (LSM), hepatic venous pressure gradient (HVPG), platelet count (PLT), and spleen volume. We included 197 subjects, aged 54.9 ± 13.8 years (mean ± standard deviation), 111 males (56.3%): 35 healthy controls, 44 non-ACLD, and 118 ACLD patients. TVVR and HVVR were highest in controls (3.9; 2.1), intermediate in non-ACLD (2.8; 1.7), and lowest in ACLD patients (2.3; 1.0) (p ≤ 0.001). PVVR was reduced in both non-ACLD and ACLD patients (both 1.2) compared to controls (1.7) (p ≤ 0.001), but showed no difference between CLD groups (p = 0.999). HVVR significantly correlated indirectly with FIB-4, ALBI, MELD-Na, LSM, and spleen volume (ρ ranging from -0.27 to -0.40), and directly with PLT (ρ = 0.36). TVVR and PVVR showed similar but weaker correlations. Deep learning-based hepatic vessel volumetry demonstrated differences between healthy liver and chronic liver disease stages and shows correlations with established markers of disease severity. Hepatic vessel volumetry demonstrates differences between healthy liver and chronic liver disease stages, potentially serving as a non-invasive imaging biomarker. Deep learning-based vessel analysis can provide automated quantification of hepatic vascular changes across healthy liver and chronic liver disease stages. Automated quantification of hepatic vasculature shows significantly reduced hepatic vascular volume in advanced chronic liver disease compared to non-advanced disease and healthy liver. Decreased hepatic vascular volume, particularly in the hepatic venous system, correlates with markers of liver dysfunction, fibrosis, and portal hypertension.

Graph Neural Networks for Realistic Bleeding Prediction in Surgical Simulators.

Kakdas YC, De S, Demirel D

pubmed logopapersAug 12 2025
This study presents a novel approach using graph neural networks to predict the risk of internal bleeding using vessel maps derived from patient CT and MRI scans, aimed at enhancing the realism of surgical simulators for emergency scenarios such as trauma, where rapid detection of internal bleeding can be lifesaving. First, medical images are segmented and converted into graph representations of the vasculature, where nodes represent vessel branching points with spatial coordinates and edges encode vessel features such as length and radius. Due to no existing dataset directly labeling bleeding risks, we calculate the bleeding probability for each vessel node using a physics-based heuristic, peripheral vascular resistance via the Hagen-Poiseuille equation. A graph attention network is then trained to regress these probabilities, effectively learning to predict hemorrhage risk from the graph-structured imaging data. The model is trained using a tenfold cross-validation on a combined dataset of 1708 vessel graphs extracted from four public image datasets (MSD, KiTS, AbdomenCT, CT-ORG) with optimization via the Adam optimizer, mean squared error loss, early stopping, and L2 regularization. Our model achieves a mean R-squared of 0.86, reaching up to 0.9188 in optimal configurations and low mean training and validation losses of 0.0069 and 0.0074, respectively, in predicting bleeding risk, with higher performance on well-connected vascular graphs. Finally, we integrate the trained model into an immersive virtual reality environment to simulate intra-abdominal bleeding scenarios for immersive surgical training. The model demonstrates robust predictive performance despite the inherent sparsity of real-life datasets.

A Deep Learning-Based Automatic Recognition Model for Polycystic Ovary Ultrasound Images.

Zhao B, Wen L, Huang Y, Fu Y, Zhou S, Liu J, Liu M, Li Y

pubmed logopapersAug 11 2025
Polycystic ovary syndrome (PCOS) has a significant impact on endocrine metabolism, reproductive function, and mental health in women of reproductive age. Ultrasound remains an essential diagnostic tool for PCOS, particularly in individuals presenting with oligomenorrhea or ovulatory dysfunction accompanied by polycystic ovaries, as well as hyperandrogenism associated with polycystic ovaries. However, the accuracy of ultrasound in identifying polycystic ovarian morphology remains variable. To develop a deep learning model capable of rapidly and accurately identifying PCOS using ovarian ultrasound images. Prospective diagnostic accuracy study. This prospective study included data from 1,751 women with suspected PCOS who presented at two affiliated hospitals at Central South University, with clinical and ultrasound information collected and archived. Patients from center 1 were randomly divided into a training set and an internal validation set in a 7:3 ratio, while patients from center 2 served as the external validation set. Using the YOLOv11 deep learning framework, an automated recognition model for ovarian ultrasound images in PCOS cases was constructed, and its diagnostic performance was evaluated. Ultrasound images from 933 patients (781 from center 1 and 152 from center 2) were analyzed. The mean average precision of the YOLOv11 model in detecting the target ovary was 95.7%, 97.6%, and 97.8% for the training, internal validation, and external validation sets, respectively. For diagnostic classification, the model achieved an F1 score of 95.0% in the training set and 96.9% in both validation sets. The area under the curve values were 0.953, 0.973, and 0.967 for the training, internal validation, and external validation sets respectively. The model also demonstrated significantly faster evaluation of a single ovary compared to clinicians (doctor, 5.0 seconds; model, 0.1 seconds; <i>p</i> < 0.01). The YOLOv11-based automatic recognition model for PCOS ovarian ultrasound images exhibits strong target detection and diagnostic performance. This approach can streamline the follicle counting process in conventional ultrasound and enhance the efficiency and generalizability of ultrasound-based PCOS assessment.

Ratio of visceral-to-subcutaneous fat area improves long-term mortality prediction over either measure alone: automated CT-based AI measures with longitudinal follow-up in a large adult cohort.

Liu D, Kuchnia AJ, Blake GM, Lee MH, Garrett JW, Pickhardt PJ

pubmed logopapersAug 11 2025
Fully automated AI-based algorithms can quantify adipose tissue on abdominal CT images. The aim of this study was to investigate the clinical value of these biomarkers by determining the association between adipose tissue measures and all-cause mortality. This retrospective study included 151,141 patients who underwent abdominal CT for any reason between 2000 and 2021. A validated AI-based algorithm quantified subcutaneous (SAT) and visceral (VAT) adipose tissue cross-sectional area. A visceral-to-subcutaneous adipose tissue area ratio (VSR) was calculated. Clinical data (age at the time of CT, sex, date of death, date of last contact) was obtained from a database search of the electronic health record. Hazard ratios (HR) and Kaplan-Meier curves assessed the relationship between adipose tissue measures and mortality. The endpoint of interest was all-cause mortality, with additional subgroup analysis including age and gender. 138,169 patients were included in the final analysis. Higher VSR was associated with increased mortality; this association was strongest in younger women (highest compared to lowest risk quartile HR 3.32 in 18-39y). Lower SAT was associated with increased mortality regardless of sex or age group (HR up to 1.63 in 18-39y). Higher VAT was associated with increased mortality in younger age groups, with the trend weakening and reversing with age; this association was stronger in women. AI-based CT measures of SAT, VAT, and VSR are predictive of mortality, with VSR being the highest performing fat area biomarker overall. These metrics tended to perform better for women and younger patients. Incorporating AI tools can augment patient assessment and management, improving outcome.

Using Machine Learning to Improve the Contrast-Enhanced Ultrasound Liver Imaging Reporting and Data System Diagnosis of Hepatocellular Carcinoma in Indeterminate Liver Nodules.

Hoopes JR, Lyshchik A, Xiao TS, Berzigotti A, Fetzer DT, Forsberg F, Sidhu PS, Wessner CE, Wilson SR, Keith SW

pubmed logopapersAug 11 2025
Liver cancer ranks among the most lethal cancers. Hepatocellular carcinoma (HCC) is the most common type of primary liver cancer and better diagnostic tools are needed to diagnose patients at risk. The aim is to develop a machine learning algorithm that enhances the sensitivity and specificity of the Contrast-Enhanced Ultrasound Liver Imaging Reporting and Data System (CEUS-LIRADS) in classifying indeterminate at-risk liver nodules (LR-M, LR-3, LR-4) as HCC or non-HCC. Our study includes patients at risk for HCC with untreated indeterminate focal liver observations detected on US or contrast-enhanced CT or MRI performed as part of their clinical standard of care from January 2018 to November 2022. Recursive partitioning was used to improve HCC diagnosis in indeterminate at-risk nodules. Demographics, blood biomarkers, and CEUS imaging features were evaluated as potential predictors for the algorithm to classify nodules as HCC or non-HCC. We evaluated 244 indeterminate liver nodules from 224 patients (mean age 62.9 y). Of the nodules, 73.2% (164/224) were from males. The algorithm was trained on a random 2/3 partition of 163 liver nodules and correctly reclassified more than half of the HCC liver nodules previously categorized as indeterminate in the independent 1/3 test partition of 81 liver nodules, achieving a sensitivity of 56.3% (95% CI: 42.0%, 70.2%) and specificity of 93.9% (95% CI: 84.4%, 100.0%). Machine learning was applied to the multicenter, multinational study of CEUS LI-RADS indeterminate at-risk liver nodules and correctly diagnosed HCC in more than half of the HCC nodules.

Enhanced Liver Tumor Detection in CT Images Using 3D U-Net and Bat Algorithm for Hyperparameter Optimization

Nastaran Ghorbani, Bitasadat Jamshidi, Mohsen Rostamy-Malkhalifeh

arxiv logopreprintAug 11 2025
Liver cancer is one of the most prevalent and lethal forms of cancer, making early detection crucial for effective treatment. This paper introduces a novel approach for automated liver tumor segmentation in computed tomography (CT) images by integrating a 3D U-Net architecture with the Bat Algorithm for hyperparameter optimization. The method enhances segmentation accuracy and robustness by intelligently optimizing key parameters like the learning rate and batch size. Evaluated on a publicly available dataset, our model demonstrates a strong ability to balance precision and recall, with a high F1-score at lower prediction thresholds. This is particularly valuable for clinical diagnostics, where ensuring no potential tumors are missed is paramount. Our work contributes to the field of medical image analysis by demonstrating that the synergy between a robust deep learning architecture and a metaheuristic optimization algorithm can yield a highly effective solution for complex segmentation tasks.
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