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"AI tumor delineation for all breathing phases in early-stage NSCLC".

DelaO-Arevalo LR, Sijtsema NM, van Dijk LV, Langendijk JA, Wijsman R, van Ooijen PMA

pubmed logopapersAug 9 2025
Accurate delineation of the Gross Tumor Volume (GTV) and the Internal Target Volume (ITV) in early-stage lung tumors is crucial in Stereotactic Body Radiation Therapy (SBRT). Traditionally, the ITVs, which account for breathing motion, are generated by manually contouring GTVs across all breathing phases (BPs), a time-consuming process. This research aims to streamline this workflow by developing a deep learning algorithm to automatically delineate GTVs in all four-dimensional computed tomography (4D-CT) BPs for early-stage Non-Small Cell Lung Cancer Patients (NSCLC). A dataset of 214 early-stage NSCLC patients treated with SBRT was used. Each patient had a 4D-CT scan containing ten reconstructed BPs. The data were divided into a training set (75 %) and a testing set (25 %). Three models SwinUNetR and Dynamic UNet (DynUnet), and a hybrid model combining both (Swin + Dyn)were trained and evaluated using the Dice Similarity Coefficient (DSC), 3 mm Surface Dice Similarity Coefficient (SDSC), and the 95<sup>th</sup> percentile Hausdorff distance (HD95). The best performing model was used to delineate GTVs in all test set BPs, creating the ITVs using two methods: all 10 phases and the maximum inspiration/expiration phases. The ITVs were compared to the ground truth ITVs. The Swin + Dyn model achieved the highest performance, with a test set SDSC of 0.79 ± 0.14 for GTV 50 %. For the ITVs, the SDSC was 0.79 ± 0.16 using all 10 BPs and 0.77 ± 0.14 using 2 BPs. At the voxel level, the Swin + DynNet network achieved a sensitivity of 0.75 ± 0.14 and precision of 0.84 ± 0.10 for the ITV 2 breathing phases, and a sensitivity of 0.79 ± 0.12 and precision of 0.80 ± 0.11 for the 10 breathing phases. The Swin + Dyn Net algorithm, trained on the maximum expiration CT-scan effectively delineated gross tumor volumes in all breathing phases and the resulting ITV showed a good agreement with the ground truth (surface DSC = 0.79 ± 0.16 using all 10 BPs and 0.77 ± 0.14 using 2 BPs.). The proposed approach could reduce delineation time and inter-performer variability in the tumor contouring process for NSCLC SBRT workflows.

Quantitative radiomic analysis of computed tomography scans using machine and deep learning techniques accurately predicts histological subtypes of non-small cell lung cancer: A retrospective analysis.

Panchawagh S, Halder A, Haldule S, Sanker V, Lalwani D, Sequeria R, Naik H, Desai A

pubmed logopapersAug 9 2025
Non-small cell lung cancer (NSCLC) histological subtypes impact treatment decisions. While pre-surgical histopathological examination is ideal, it's not always possible. CT radiomic analysis shows promise in predicting NSCLC histological subtypes. To predict NSCLC histological subtypes using machine learning and deep learning models using Radiomic features. 422 lung CT scans from The Cancer Imaging Archive (TCIA) were analyzed. Primary neoplasms were segmented by expert radiologists. Using PyRadiomics, 2446 radiomic features were extracted; post-selection, 179 features remained. Machine learning models like logistic regression (LR), Support vector machine (SVM), Random Forest (RF), XGBoost, LightGBM, and CatBoost were employed, alongside a deep neural network (DNN) model. RF demonstrated the highest accuracy at 78 % (95 % CI: 70 %-84 %) and AUC-ROC at 94 % (95 % CI: 90 %-96 %). LightGBM, XGBoost, and CatBoost had AUC-ROC values of 95 %, 93 %, and 93 % respectively. The DNN's AUC was 94.4 % (95 % CI: 94.1 %-94.6 %). Logistic regression had the least efficacy. For histological subtype prediction, random forest, boosting models, and DNN were superior. Quantitative radiomic analysis with machine learning can accurately determine NSCLC histological subtypes. Random forest, ensemble models, and DNNs show significant promise for pre-operative NSCLC classification, which can streamline therapy decisions.

Deep Learning Chest X-Ray Age, Epigenetic Aging Clocks and Associations with Age-Related Subclinical Disease in the Project Baseline Health Study.

Chandra J, Short S, Rodriguez F, Maron DJ, Pagidipati N, Hernandez AF, Mahaffey KW, Shah SH, Kiel DP, Lu MT, Raghu VK

pubmed logopapersAug 8 2025
Chronological age is an important component of medical risk scores and decision-making. However, there is considerable variability in how individuals age. We recently published an open-source deep learning model to assess biological age from chest radiographs (CXR-Age), which predicts all-cause and cardiovascular mortality better than chronological age. Here, we compare CXR-Age to two established epigenetic aging clocks (First generation-Horvath Age; Second generation-DNAm PhenoAge) to test which is more strongly associated with cardiopulmonary disease and frailty. Our cohort consisted of 2,097 participants from the Project Baseline Health Study, a prospective cohort study of individuals from four US sites. We compared the association between the different aging clocks and measures of cardiopulmonary disease, frailty, and protein abundance collected at the participant's first annual visit using linear regression models adjusted for common confounders. We found that CXR-Age was associated with coronary calcium, cardiovascular risk factors, worsening pulmonary function, increased frailty, and abundance in plasma of two proteins implicated in neuroinflammation and aging. Associations with DNAm PhenoAge were weaker for pulmonary function and all metrics in middle-age adults. We identified thirteen proteins that were associated with DNAm PhenoAge, one (CDH13) of which was also associated with CXR-Age. No associations were found with Horvath Age. These results suggest that CXR-Age may serve as a better metric of cardiopulmonary aging than epigenetic aging clocks, especially in midlife adults.

Medical application driven content based medical image retrieval system for enhanced analysis of X-ray images.

Saranya E, Chinnadurai M

pubmed logopapersAug 8 2025
By carefully analyzing latent image properties, content-based image retrieval (CBIR) systems are able to recover pertinent images without relying on text descriptions, natural language tags, or keywords related to the image. This search procedure makes it quite easy to automatically retrieve images in huge, well-balanced datasets. However, in the medical field, such datasets are usually not available. This study proposed an advanced DL technique to enhance the accuracy of image retrieval in complex medical datasets. The proposed model can be integrated into five stages, namely pre-processing, decomposing the images, feature extraction, dimensionality reduction, and classification with an image retrieval mechanism. The hybridized Wavelet-Hadamard Transform (HWHT) was utilized to obtain both low and high frequency detail for analysis. In order to extract the main characteristics, the Gray Level Co-occurrence Matrix (GLCM) was employed. Furthermore, to minimize feature complexity, Sine chaos based artificial rabbit optimization (SCARO) was utilized. By employing the Bhattacharyya Coefficient for improved similarity matching, the Bhattacharya Context performance aware global attention-based Transformer (BCGAT) improves classification accuracy. The experimental results proved that the COVID-19 Chest X-ray image dataset attained higher accuracy, precision, recall, and F1-Score of 99.5%, 97.1%, 97.1%, and 97.1%, 97.1%, respectively. However, the chest x-ray image (pneumonia) dataset has attained higher accuracy, precision, recall, and F1-score values of 98.60%, 98.49%, 97.40%, and 98.50%, respectively. For the NIH chest X-ray dataset, the accuracy value is 99.67%.

Development and validation of a transformer-based deep learning model for predicting distant metastasis in non-small cell lung cancer using <sup>18</sup>FDG PET/CT images.

Hu N, Luo Y, Tang M, Yan G, Yuan S, Li F, Lei P

pubmed logopapersAug 8 2025
This study aimed to develop and validate a hybrid deep learning (DL) model that integrates convolutional neural network (CNN) and vision transformer (ViT) architectures to predict distant metastasis (DM) in patients with non-small cell lung cancer (NSCLC) using <sup>18</sup>F-FDG PET/CT images. A retrospective analysis was conducted on a cohort of consecutively registered patients who were newly diagnosed and untreated for NSCLC. A total of 167 patients with available PET/CT images were included in the analysis. DL features were extracted using a combination of CNN and ViT architectures, followed by feature selection, model construction, and evaluation of model performance using the receiver operating characteristic (ROC) and the area under the curve (AUC). The ViT-based DL model exhibited strong predictive capabilities in both the training and validation cohorts, achieving AUCs of 0.824 and 0.830 for CT features, and 0.602 and 0.694 for PET features, respectively. Notably, the model that integrated both PET and CT features demonstrated a notable AUC of 0.882 in the validation cohort, outperforming models that utilized either PET or CT features alone. Furthermore, this model outperformed the CNN model (ResNet 50), which achieved an AUC of 0.752 [95% CI 0.613, 0.890], p < 0.05. Decision curve analysis further supported the efficacy of the ViT-based DL model. The ViT-based DL developed in this study demonstrates considerable potential in predicting DM in patients with NSCLC, potentially informing the creation of personalized treatment strategies. Future validation through prospective studies with larger cohorts is necessary.

A Cohort Study of Pediatric Severe Community-Acquired Pneumonia Involving AI-Based CT Image Parameters and Electronic Health Record Data.

He M, Yuan J, Liu A, Pu R, Yu W, Wang Y, Wang L, Nie X, Yi J, Xue H, Xie J

pubmed logopapersAug 8 2025
Community-acquired pneumonia (CAP) is a significant concern for children worldwide and is associated with a high morbidity and mortality. To improve patient outcomes, early intervention and accurate diagnosis are essential. Artificial intelligence (AI) can mine and label imaging data and thus may contribute to precision research and personalized clinical management. The baseline characteristics of 230 children with severe CAP hospitalized from January 2023 to October 2024 were retrospectively analyzed. The patients were divided into two groups according to the presence of respiratory failure. The predictive ability of AI-derived chest CT (computed tomography) indices alone for respiratory failure was assessed via logistic regression analysis. ROC (receiver operating characteristic) curves were plotted for these regression models. After adjusting for age, white blood cell count, neutrophils, lymphocytes, creatinine, wheezing, and fever > 5 days, a greater number of involved lung lobes [odds ratio 1.347, 95% confidence interval (95% CI) 1.036-1.750, P = 0.026] and bilateral lung involvement (odds ratio 2.734, 95% CI 1.084-6.893, P = 0.033) were significantly associated with respiratory failure. The discriminatory power (as measured by the area under curve) of Model 2 and Model 3, which included electronic health record data and the accuracy of CT imaging features, was better than that of Model 0 and Model 1, which contained only the chest CT parameters. The sensitivity and specificity of Model 2 at the optimal critical value (0.441) were 84.3% and 59.8%, respectively. The sensitivity and specificity of Model 3 at the optimal critical value (0.446) were 68.6% and 76.0%, respectively. The use of AI-derived chest CT indices may achieve high diagnostic accuracy and guide precise interventions for patients with severe CAP. However, clinical, laboratory, and AI-derived chest CT indices should be included to accurately predict and treat severe CAP.

Explainable Cryobiopsy AI Model, CRAI, to Predict Disease Progression for Transbronchial Lung Cryobiopsies with Interstitial Pneumonia

Uegami, W., Okoshi, E. N., Lami, K., Nei, Y., Ozasa, M., Kataoka, K., Kitamura, Y., Kohashi, Y., Cooper, L. A. D., Sakanashi, H., Saito, Y., Kondoh, Y., the study group on CRYOSOLUTION,, Fukuoka, J.

medrxiv logopreprintAug 8 2025
BackgroundInterstitial lung disease (ILD) encompasses diverse pulmonary disorders with varied prognoses. Current pathological diagnoses suffer from inter-observer variability,necessitating more standardized approaches. We developed an ensemble model AI for cryobiopsy, CRAI, an artificial intelligence model to analyze transbronchial lung cryobiopsy (TBLC) specimens and predict patient outcomes. MethodsWe developed an explainable AI model, CRAI, to analyze TBLC. CRAI comprises seven modules for detecting histological features, generating 19 pathologically significant findings. A downstream XGBoost classifier was developed to predict disease progression using these findings. The models performance was evaluated using respiratory function changes and survival analysis in cross-validation and external test cohorts. FindingsIn the internal cross-validation (135 cases), the model predicted 105 cases without disease progression and 30 with disease progression. The annual {Delta}%FVC was -1.293 in the non-progressive group versus -5.198 in the progressive group, outperforming most pathologists diagnoses. In the external test cohort (48 cases), the model predicted 38 non-progressive and 10 progressive cases. Survival analysis demonstrated significantly shorter survival times in the progressive group (p=0.034). InterpretationCRAI provides a comprehensive, interpretable approach to analyzing TBLC specimens, offering potential for standardizing ILD diagnosis and predicting disease progression. The model could facilitate early identification of progressive cases and guide personalized therapeutic interventions. FundingNew Energy and Industrial Technology Development Organization (NEDO) and Japanese Ministry of Health, Labor, and Welfare.

GPT-4 vs. Radiologists: who advances mediastinal tumor classification better across report quality levels? A cohort study.

Wen R, Li X, Chen K, Sun M, Zhu C, Xu P, Chen F, Ji C, Mi P, Li X, Deng X, Yang Q, Song W, Shang Y, Huang S, Zhou M, Wang J, Zhou C, Chen W, Liu C

pubmed logopapersAug 8 2025
Accurate mediastinal tumor classification is crucial for treatment planning, but diagnostic performance varies with radiologists' experience and report quality. To evaluate GPT-4's diagnostic accuracy in classifying mediastinal tumors from radiological reports compared to radiologists of different experience levels using radiological reports of varying quality. We conducted a retrospective study of 1,494 patients from five tertiary hospitals with mediastinal tumors diagnosed via chest CT and pathology. Radiological reports were categorized into low-, medium-, and high-quality based on predefined criteria assessed by experienced radiologists. Six radiologists (two residents, two attending radiologists, and two associate senior radiologists) and GPT-4 evaluated the chest CT reports. Diagnostic performance was analyzed overall, by report quality, and by tumor type using Wald χ2 tests and 95% CIs calculated via the Wilson method. GPT-4 achieved an overall diagnostic accuracy of 73.3% (95% CI: 71.0-75.5), comparable to associate senior radiologists (74.3%, 95% CI: 72.0-76.5; p >0.05). For low-quality reports, GPT-4 outperformed associate senior radiologists (60.8% vs. 51.1%, p<0.001). In high-quality reports, GPT-4 was comparable to attending radiologists (80.6% vs.79.4%, p>0.05). Diagnostic performance varied by tumor type: GPT-4 was comparable to radiology residents for neurogenic tumors (44.9% vs. 50.3%, p>0.05), similar to associate senior radiologists for teratomas (68.1% vs. 65.9%, p>0.05), and superior in diagnosing lymphoma (75.4% vs. 60.4%, p<0.001). GPT-4 demonstrated interpretation accuracy comparable to Associate Senior Radiologists, excelling in low-quality reports and outperforming them in diagnosing lymphoma. These findings underscore GPT-4's potential to enhance diagnostic performance in challenging diagnostic scenarios.

BM3D filtering with Ensemble Hilbert-Huang Transform and spiking neural networks for cardiomegaly detection in chest radiographs.

Patel RK

pubmed logopapersAug 8 2025
Cardiomyopathy is a life-threatening condition associated with heart failure, arrhythmias, thromboembolism, and sudden cardiac death, posing a significant contribution to worldwide morbidity and mortality. Cardiomegaly, which is usually the initial radiologic sign, may reflect the progression of an underlying heart disease or an underlying undiagnosed cardiac condition. Chest radiography is the most frequently used imaging method for detecting heart enlargement. Prompt and accurate diagnosis is essential for prompt intervention and appropriate treatment planning to prevent disease progression and improve patient outcomes. The current work provides a new methodology for automated cardiomegaly diagnosis using X-ray images through the fusion of Block-Matching and 3D Filtering (BM3D) within the Ensemble Hilbert-Huang Transform (EHHT), convolutional neural networks like Pretrained VGG16, ResNet50, InceptionV3, DenseNet169, and Spiking Neural Networks (SNN), and Classifiers. BM3D is first used for image edge retention and noise reduction, and then EHHT is applied to obtain informative features from X-ray images. The features that have been extracted are then processed using an SNN that simulates neural processes at a biological level and offers a biologically possible classification solution. Gradient-weighted Class Activation Mapping (GradCAM) emphasized important areas that affected model predictions. The SNN performed the best among all the models tested, with 97.6 % accuracy, 96.3 % sensitivity, and 98.2 % specificity. These findings show the SNN's high potential for facilitating accurate and efficient cardiomyopathy diagnosis, leading to enhanced clinical decision-making and patient outcomes.

Vision-Language Model-Based Semantic-Guided Imaging Biomarker for Lung Nodule Malignancy Prediction.

Zhuang L, Tabatabaei SMH, Salehi-Rad R, Tran LM, Aberle DR, Prosper AE, Hsu W

pubmed logopapersAug 8 2025
Machine learning models have utilized semantic features, deep features, or both to assess lung nodule malignancy. However, their reliance on manual annotation during inference, limited interpretability, and sensitivity to imaging variations hinder their application in real-world clinical settings. Thus, this research aims to integrate semantic features derived from radiologists' assessments of nodules, guiding the model to learn clinically relevant, robust, and explainable imaging features for predicting lung cancer. We obtained 938 low-dose CT scans from the National Lung Screening Trial (NLST) with 1,246 nodules and semantic features. Additionally, the Lung Image Database Consortium dataset contains 1,018 CT scans, with 2,625 lesions annotated for nodule characteristics. Three external datasets were obtained from UCLA Health, the LUNGx Challenge, and the Duke Lung Cancer Screening. We fine-tuned a pretrained Contrastive Language-Image Pretraining (CLIP) model with a parameter-efficient fine-tuning approach to align imaging and semantic text features and predict the one-year lung cancer diagnosis. Our model outperformed state-of-the-art (SOTA) models in the NLST test set with an AUROC of 0.901 and AUPRC of 0.776. It also showed robust results in external datasets. Using CLIP, we also obtained predictions on semantic features through zero-shot inference, such as nodule margin (AUROC: 0.812), nodule consistency (0.812), and pleural attachment (0.840). Our approach surpasses the SOTA models in predicting lung cancer across datasets collected from diverse clinical settings, providing explainable outputs, aiding clinicians in comprehending the underlying meaning of model predictions. This approach also prevents the model from learning shortcuts and generalizes across clinical settings. The code is available at https://github.com/luotingzhuang/CLIP_nodule.
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