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Developments in MRI radiomics research for vascular cognitive impairment.

Chen X, Luo X, Chen L, Liu H, Yin X, Chen Z

pubmed logopapersJul 1 2025
Vascular cognitive impairment (VCI) is an umbrella term for diseases associated with cognitive decline induced by substantive brain damage following pathological changes in the cerebrovascular system. The primary clinical manifestations include behavioral abnormalities and diminished learning and memory cognitive functions. If the location and extent of brain injury are not identified early and therapeutic interventions are not promptly administered, it may lead to irreversible cognitive impairment. Therefore, the early diagnosis of VCI is crucial for its prevention and treatment. Prior to the onset of cognitive impairment in VCI, magnetic resonance imaging (MRI) radiomics can be utilized for early assessment and diagnosis, thereby guiding clinicians in providing precise treatment for patients, which holds significant potential for development. This article reviews the classification of VCI, the concept of radiomics, the application of MRI radiomics in VCI, and the limitations of radiomics in the context of advancements in its application within the central nervous system. CRITICAL RELEVANCE STATEMENT: This article explores how MRI radiomics can be used to detect VCI early, enhancing clinical radiology practice by offering a reliable method for prediction, diagnosis, and identification, which also promotes standardization in research and integration of disciplines. KEY POINTS: MRI radiomics can predict VCI early. MRI radiomics can diagnose VCI. MRI radiomics distinguishes VCI from Alzheimer's disease.

Deep learning model for grading carcinoma with Gini-based feature selection and linear production-inspired feature fusion.

Kundu S, Mukhopadhyay S, Talukdar R, Kaplun D, Voznesensky A, Sarkar R

pubmed logopapersJul 1 2025
The most common types of kidneys and liver cancer are renal cell carcinoma (RCC) and hepatic cell carcinoma (HCC), respectively. Accurate grading of these carcinomas is essential for determining the most appropriate treatment strategies, including surgery or pharmacological interventions. Traditional deep learning methods often struggle with the intricate and complex patterns seen in histopathology images of RCC and HCC, leading to inaccuracies in classification. To enhance the grading accuracy for liver and renal cell carcinoma, this research introduces a novel feature selection and fusion framework inspired by economic theories, incorporating attention mechanisms into three Convolutional Neural Network (CNN) architectures-MobileNetV2, DenseNet121, and InceptionV3-as foundational models. The attention mechanisms dynamically identify crucial image regions, leveraging each CNN's unique strengths. Additionally, a Gini-based feature selection method is implemented to prioritize the most discriminative features, and the extracted features from each network are optimally combined using a fusion technique modeled after a linear production function, maximizing each model's contribution to the final prediction. Experimental evaluations demonstrate that this proposed approach outperforms existing state-of-the-art models, achieving high accuracies of 93.04% for RCC and 98.24% for LCC. This underscores the method's robustness and effectiveness in accurately grading these types of cancers. The code of our method is publicly available in https://github.com/GHOSTCALL983/GRADE-CLASSIFICATION .

A Contrast-Enhanced Ultrasound Cine-Based Deep Learning Model for Predicting the Response of Advanced Hepatocellular Carcinoma to Hepatic Arterial Infusion Chemotherapy Combined With Systemic Therapies.

Han X, Peng C, Ruan SM, Li L, He M, Shi M, Huang B, Luo Y, Liu J, Wen H, Wang W, Zhou J, Lu M, Chen X, Zou R, Liu Z

pubmed logopapersJul 1 2025
Recently, a hepatic arterial infusion chemotherapy (HAIC)-associated combination therapeutic regimen, comprising HAIC and systemic therapies (molecular targeted therapy plus immunotherapy), referred to as HAIC combination therapy, has demonstrated promising anticancer effects. Identifying individuals who may potentially benefit from HAIC combination therapy could contribute to improved treatment decision-making for patients with advanced hepatocellular carcinoma (HCC). This dual-center study was a retrospective analysis of prospectively collected data with advanced HCC patients who underwent HAIC combination therapy and pretreatment contrast-enhanced ultrasound (CEUS) evaluations from March 2019 to March 2023. Two deep learning models, AE-3DNet and 3DNet, along with a time-intensity curve-based model, were developed for predicting therapeutic responses from pretreatment CEUS cine images. Diagnostic metrics, including the area under the receiver-operating-characteristic curve (AUC), were calculated to compare the performance of the models. Survival analysis was used to assess the relationship between predicted responses and prognostic outcomes. The model of AE-3DNet was constructed on the top of 3DNet, with innovative incorporation of spatiotemporal attention modules to enhance the capacity for dynamic feature extraction. 326 patients were included, 243 of whom formed the internal validation cohort, which was utilized for model development and fivefold cross-validation, while the rest formed the external validation cohort. Objective response (OR) or non-objective response (non-OR) were observed in 63% (206/326) and 37% (120/326) of the participants, respectively. Among the three efficacy prediction models assessed, AE-3DNet performed superiorly with AUC values of 0.84 and 0.85 in the internal and external validation cohorts, respectively. AE-3DNet's predicted response survival curves closely resembled actual clinical outcomes. The deep learning model of AE-3DNet developed based on pretreatment CEUS cine performed satisfactorily in predicting the responses of advanced HCC to HAIC combination therapy, which may serve as a promising tool for guiding combined therapy and individualized treatment strategies. Trial Registration: NCT02973685.

Multi-modal and Multi-view Cervical Spondylosis Imaging Dataset.

Yu QS, Shan JY, Ma J, Gao G, Tao BZ, Qiao GY, Zhang JN, Wang T, Zhao YF, Qin XL, Yin YH

pubmed logopapersJul 1 2025
Multi-modal and multi-view imaging is essential for diagnosis and assessment of cervical spondylosis. Deep learning has increasingly been developed to assist in diagnosis and assessment, which can help improve clinical management and provide new ideas for clinical research. To support the development and testing of deep learning models for cervical spondylosis, we have publicly shared a multi-modal and multi-view imaging dataset of cervical spondylosis, named MMCSD. This dataset comprises MRI and CT images from 250 patients. It includes axial bone and soft tissue window CT scans, sagittal T1-weighted and T2-weighted MRI, as well as axial T2-weighted MRI. Neck pain is one of the most common symptoms of cervical spondylosis. We use the MMCSD to develop a deep learning model for predicting postoperative neck pain in patients with cervical spondylosis, thereby validating its usability. We hope that the MMCSD will contribute to the advancement of neural network models for cervical spondylosis and neck pain, further optimizing clinical diagnostic assessments and treatment decision-making for these conditions.

Synthetic Versus Classic Data Augmentation: Impacts on Breast Ultrasound Image Classification.

Medghalchi Y, Zakariaei N, Rahmim A, Hacihaliloglu I

pubmed logopapersJul 1 2025
The effectiveness of deep neural networks (DNNs) for the ultrasound image analysis depends on the availability and accuracy of the training data. However, the large-scale data collection and annotation, particularly in medical fields, is often costly and time consuming, especially when healthcare professionals are already burdened with their clinical responsibilities. Ensuring that a model remains robust across different imaging conditions-such as variations in ultrasound devices and manual transducer operation-is crucial in the ultrasound image analysis. The data augmentation is a widely used solution, as it increases both the size and diversity of datasets, thereby enhancing the generalization performance of DNNs. With the advent of generative networks such as generative adversarial networks (GANs) and diffusion-based models, the synthetic data generation has emerged as a promising augmentation technique. However, comprehensive studies comparing classic and generative method-based augmentation methods are lacking, particularly in ultrasound-based breast cancer imaging, where variability in breast density, tumor morphology, and operator skill poses significant challenges. This study aims to compare the effectiveness of classic and generative network-based data augmentation techniques in improving the performance and robustness of breast ultrasound image classification models. Specifically, we seek to determine whether the computational intensity of generative networks is justified in data augmentation. This analysis will provide valuable insights into the role and benefits of each technique in enhancing the diagnostic accuracy of DNN for breast cancer diagnosis. The code for this work will be available at: ht.tps://github.com/yasamin-med/SCDA.git.

A Deep Learning Approach for Nerve Injury Classification in Brachial Plexopathies Using Magnetic Resonance Neurography with Modified Hiking Optimization Algorithm.

Dahou A, Elaziz MA, Khattap MG, Hassan HGEMA

pubmed logopapersJul 1 2025
Brachial plexopathies (BPs) encompass a complex spectrum of nerve injuries affecting motor and sensory function in the upper extremities. Diagnosis is challenging due to the intricate anatomy and symptom overlap with other neuropathies. Magnetic Resonance Neurography (MRN) provides advanced imaging but requires specialized interpretation. This study proposes an AI-based framework that combines deep learning (DL) with the modified Hiking Optimization Algorithm (MHOA) enhanced by a Comprehensive Learning (CL) technique to improve the classification of nerve injuries (neuropraxia, axonotmesis, neurotmesis) using MRN data. The framework utilizes MobileNetV4 for feature extraction and MHOA for optimized feature selection across different MRI sequences (STIR, T2, T1, and DWI). A dataset of 39 patients diagnosed with BP was used. The framework classifies injuries based on Seddon's criteria, distinguishing between normal and abnormal conditions as well as injury severity. The model achieved excellent performance, with 1.0000 accuracy in distinguishing normal from abnormal conditions using STIR and T2 sequences. For injury severity classification, accuracy was 0.9820 in STIR, outperforming the original HOA and other metaheuristic algorithms. Additionally, high classification accuracy (0.9667) was observed in DWI. The proposed framework outperformed traditional methods and demonstrated high sensitivity and specificity. The proposed AI-based framework significantly improves the diagnosis of BP by accurately classifying nerve injury types. By integrating DL and optimization techniques, it reduces diagnostic variability, making it a valuable tool for clinical settings with limited specialized neuroimaging expertise. This framework has the potential to enhance clinical decision-making and optimize patient outcomes through precise and timely diagnoses.

Machine Learning-Based Diagnostic Prediction Model Using T1-Weighted Striatal Magnetic Resonance Imaging for Early-Stage Parkinson's Disease Detection.

Accioly ARM, Menezes VO, Calixto LH, Bispo DPCF, Lachmann M, Mourato FA, Machado MAD, Diniz PRB

pubmed logopapersJul 1 2025
Diagnosing Parkinson's disease (PD) typically relies on clinical evaluations, often detecting it in advanced stages. Recently, artificial intelligence has increasingly been applied to imaging for neurodegenerative disorders. This study aims to develop a diagnostic prediction model using T1-weighted magnetic resonance imaging (T1-MRI) data from the caudate and putamen in individuals with early-stage PD. This retrospective case-control study included 69 early-stage PD patients and 22 controls, recruited through the Parkinson's Progression Markers Initiative. T1-MRI scans were acquired using a 3-tesla system. 432 radiomic features were extracted from images of the segmented caudate and putâmen in an automated way. Feature selection was performed using Pearson's correlation and recursive feature elimination to identify the most relevant variables. Three machine learning algorithms-random forest (RF), support vector machine and logistic regression-were evaluated for diagnostic prediction effectiveness using a cross-validation method. The Shapley Additive Explanations technique identified the most significant features distinguishing between the groups. The metrics used to evaluate the performance were discrimination, expressed in area under the ROC curve (AUC), sensitivity and specificity; and calibration, expressed as accuracy. The RF algorithm showed superior performance with an average accuracy of 92.85%, precision of 100.00%, sensitivity of 86.66%, specificity of 96.65% and AUC of 0.93. The three most influential features were contrast, elongation, and gray-level non-uniformity, all from the putamen. Machine learning-based models can differentiate early-stage PD from controls using T1-weighted MRI radiomic features.

Effects of Renal Function on the Multimodal Brain Networks Affecting Mild Cognitive Impairment Converters in End-Stage Renal Disease.

Yu Z, Du Y, Pang H, Li X, Liu Y, Bu S, Wang J, Zhao M, Ren Z, Li X, Yao L

pubmed logopapersJul 1 2025
Cognitive decline is common in End-Stage Renal Disease (ESRD) patients, yet its neural mechanisms are poorly understood. This study investigates structural and functional brain network reconfiguration in ESRD patients transitioning to Mild Cognitive Impairment (MCI) and evaluates its potential for predicting MCI risk. We enrolled 90 ESRD patients with 2-year follow-up, categorized as MCI converters (MCI_C, n=48) and non-converters (MCI_NC, n=42). Brain networks were constructed using baseline rs-fMRI and high angular resolution diffusion imaging, focusing on regional structural-functional coupling (SFC). A Support Vector Machine (SVM) model was used to identify brain regions associated with cognitive decline. Mediation analysis was conducted to explore the relationship between kidney function, brain network reconfiguration, and cognition. MCI_C patients showed decreased network efficiency in the structural network and compensatory changes in the functional network. Machine learning models using multimodal network features predicted MCI with high accuracy (AUC=0.928 for training set, AUC=0.903 for test set). SHAP analysis indicated that reduced hippocampal SFC was the most significant predictor of MCI_C. Mediation analysis revealed that altered brain network topology, particularly hippocampal SFC, mediated the relationship between kidney dysfunction and cognitive decline. This study provides new insights into the link between kidney function and cognition, offering potential clinical applications for structural and functional MRI biomarkers.

Photoacoustic-Integrated Multimodal Approach for Colorectal Cancer Diagnosis.

Biswas S, Chohan DP, Wankhede M, Rodrigues J, Bhat G, Mathew S, Mahato KK

pubmed logopapersJul 1 2025
Colorectal cancer remains a major global health challenge, emphasizing the need for advanced diagnostic tools that enable early and accurate detection. Photoacoustic (PA) spectroscopy, a hybrid technique combining optical absorption with acoustic resolution, is emerging as a powerful tool in cancer diagnostics. It detects biochemical changes in biomolecules within the tumor microenvironment, aiding early identification of malignancies. Integration with modalities, such as ultrasound (US), photoacoustic microscopy (PAM), and nanoparticle-enhanced imaging, enables detailed mapping of tissue structure, vascularity, and molecular markers. When combined with endoscopy and machine learning (ML) for data analysis, PA technology offers real-time, minimally invasive, and highly accurate detection of colorectal tumors. This approach supports tumor classification, therapy monitoring, and detecting features like hypoxia and tumor-associated bacteria. Recent studies integrating machine learning with PA imaging have demonstrated high diagnostic accuracy, achieving area under the curve (AUC) values up to 0.96 and classification accuracies exceeding 89%, highlighting its potential for precise, noninvasive colorectal cancer detection. Continued advancements in nanoparticle design, molecular targeting, and ML analytics position PA as a key tool for personalized colorectal cancer management.

Interpretable Machine Learning Radiomics Model Predicts 5-year Recurrence-Free Survival in Non-metastatic Clear Cell Renal Cell Carcinoma: A Multicenter and Retrospective Cohort Study.

Zhang J, Huang W, Li Y, Zhang X, Chen Y, Chen S, Ming Q, Jiang Q, Xv Y

pubmed logopapersJul 1 2025
To develop and validate a computed tomography (CT) radiomics-based interpretable machine learning (ML) model for predicting 5-year recurrence-free survival (RFS) in non-metastatic clear cell renal cell carcinoma (ccRCC). 559 patients with non-metastatic ccRCCs were retrospectively enrolled from eight independent institutes between March 2013 and January 2019, and were assigned to the primary set (n=271), external test set 1 (n=216), and external test set 2 (n=72). 1316 Radiomics features were extracted via "Pyradiomics." The least absolute shrinkage and selection operator algorithm was used for feature selection and Rad-Score construction. Patients were stratified into low and high 5-year recurrence risk groups based on Rad-Score, followed by Kaplan-Meier analyses. Five ML models integrating Rad-Score and clinicopathological risk factors were compared. Models' performances were evaluated via the discrimination, calibration, and decision curve analysis. The most robust ML model was interpreted using the SHapley Additive exPlanation (SHAP) method. 13 radiomic features were filtered to produce the Rad-Score, which predicted 5-year RFS with area under the receiver operating characteristic curve (AUCs) of 0.734-0.836. Kaplan-Meier analysis showed significant survival differences based on Rad-Score (all Log-Rank p values <0.05). The random forest model outperformed other models, obtaining AUCs of 0.826 [95% confidential interval (CI): 0.766-0.879] and 0.799 (95% CI: 0.670-0.899) in the external test set 1 and 2, respectively. The SHAP analysis suggested positive associations between contributing factors and 5-year RFS status in non-metastatic ccRCC. CT radiomics-based interpretable ML model can effectively predict 5-year RFS in non-metastatic ccRCC patients, distinguishing between low and high 5-year recurrence risks.
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