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Refined Myocardium Segmentation from CT Using a Hybrid-Fusion Transformer

November 11, 2025biorxiv logopreprint

Authors

Qin, S.,Xing, F.,Cho, J.,Park, J.,Liu, X.,Rouhollahi, A.,Bou Farhat, E. J.,Javadikasgari, H.,Sabe, A.,Nezami, F. R.,Woo, J.,Aganj, I.

Affiliations (1)

  • BOSTON UNIVERSITY, Massachusetts General Hospital

Abstract

Accurate segmentation of the left ventricle (LV) in cardiac CT images is crucial for assessing ventricular function and diagnosing cardiovascular diseases. Creating a sufficiently large training set with accurate manual labels of LV can be cumbersome. More efficient semi-automatic segmentation, however, often includes unwanted structures, such as papillary muscles, due to low contrast between the LV wall and surrounding tissues. This study introduces a two-input-channel method within a Hybrid-Fusion Transformer deep-learning framework to produce refined LV labels from a combination of CT images and semi-automatic rough labels, effectively removing papillary muscles. By leveraging the efficiency of semi-automatic LV segmentation, we train an automatic refined segmentation model on a small set of images with both refined manual and rough semi-automatic labels. Evaluated through quantitative cross-validation, our method outperformed models that used only either CT images or rough masks as input.

Topics

bioengineering

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