Cognitive decline is common in End-Stage Renal Disease (ESRD) patients, yet its neural mechanisms are poorly understood. This study investigates structural and functional brain network reconfiguration in ESRD patients transitioning to Mild Cognitive Impairment (MCI) and evaluates its potential for predicting MCI risk. We enrolled 90 ESRD patients with 2-year follow-up, categorized as MCI converters (MCI_C, n=48) and non-converters (MCI_NC, n=42). Brain networks were constructed using baseline rs-fMRI and high angular resolution diffusion imaging, focusing on regional structural-functional coupling (SFC). A Support Vector Machine (SVM) model was used to identify brain regions associated with cognitive decline. Mediation analysis was conducted to explore the relationship between kidney function, brain network reconfiguration, and cognition. MCI_C patients showed decreased network efficiency in the structural network and compensatory changes in the functional network. Machine learning models using multimodal network features predicted MCI with high accuracy (AUC=0.928 for training set, AUC=0.903 for test set). SHAP analysis indicated that reduced hippocampal SFC was the most significant predictor of MCI_C. Mediation analysis revealed that altered brain network topology, particularly hippocampal SFC, mediated the relationship between kidney dysfunction and cognitive decline. This study provides new insights into the link between kidney function and cognition, offering potential clinical applications for structural and functional MRI biomarkers.

In this study, the authors aimed to establish a supervised machine learning (ML) model based on multiple tree-based algorithms to predict long-term biochemical outcomes and intervention-free survival (IFS) after endonasal transsphenoidal surgery (ETS) in patients with Cushing's disease (CD). The medical records of patients who underwent ETS for CD between 2013 and 2023 were reviewed. Data were collected on the patient's baseline characteristics, intervention details, histopathology, surgical outcomes, and postoperative endocrine functions. The study's primary outcome was IFS, and the therapeutic outcomes were labeled as "under control" or "treatment failure," depending on whether additional therapeutic interventions after primary ETS were required. The decision tree and random forest classifiers were trained and tested to predict long-term IFS based on unseen data, using an 80/20 cohort split. Data from 150 patients, with a median follow-up period of 56 months, were extracted. In the cohort, 42 (28%) patients required additional intervention for persistent or recurrent CD. Consequently, the IFS rates following ETS alone were 83% at 3 years and 78% at 5 years. Multivariable Cox proportional hazards analysis demonstrated that a smaller tumor diameter that could be detected by MRI (hazard ratio 0.95, 95% CI 0.90-0.99; p = 0.047) was significantly associated with greater IFS. However, the lack of tumor detection on MRI was a poor predictor. The ML-based model using a decision tree model displayed 91% accuracy (95% CI 0.70-0.94, sensitivity 87.0%, specificity 89.0%) in predicting IFS in the unseen test dataset. Random forest analysis revealed that tumor size (mean minimal depth 1.67), Knosp grade (1.75), patient age (1.80), and BMI (1.99) were the four most significant predictors of long-term IFS. The ML algorithm could predict long-term postoperative endocrinological remission in CD with high accuracy, indicating that prognosis may vary not only with previously reported factors such as tumor size, Knosp grade, gross-total resection, and patient age but also with BMI. The decision tree flowchart could potentially stratify patients with CD before ETS, allowing for the selection of personalized treatment options and thereby assisting in determining treatment plans for these patients. This ML model may lead to a deeper understanding of the complex mechanisms of CD by uncovering patterns embedded within the data.

Alzheimer's Disease (AD) poses a significant global health challenge, necessitating early and accurate diagnosis to enable timely interventions. AD is a progressive neurodegenerative disorder that affects millions worldwide and is one of the leading causes of cognitive impairment in older adults. Early diagnosis is critical for enabling effective treatment strategies, slowing disease progression, and improving the quality of life for patients. Existing diagnostic methods often struggle with limited sensitivity, overfitting, and reduced reliability due to inadequate feature extraction, imbalanced datasets, and suboptimal model architectures. This study addresses these gaps by introducing an innovative methodology that combines SVM with Deep Learning (DL) to improve the classification performance of AD. Deep learning models extract high-level imaging features which are then concatenated with SVM kernels in a late-fusion ensemble. This hybrid design leverages deep representations for pattern recognition and SVM's robustness on small sample sets. This study provides a necessary tool for early-stage identification of possible cases, so enhancing the management and treatment options. This is attained by precisely classifying the disease from neuroimaging data. The approach integrates advanced data pre-processing, dynamic feature optimization, and attention-driven learning mechanisms to enhance interpretability and robustness. The research leverages a dataset of MRI and PET imaging, integrating novel fusion techniques to extract key biomarkers indicative of cognitive decline. Unlike prior approaches, this method effectively mitigates the challenges of data sparsity and dimensionality reduction while improving generalization across diverse datasets. Comparative analysis highlights a 15% improvement in accuracy, a 12% reduction in false positives, and a 10% increase in F1-score against state-of-the-art models such as HNC and MFNNC. The proposed method significantly outperforms existing techniques across metrics like accuracy, sensitivity, specificity, and computational efficiency, achieving an overall accuracy of 98.5%.

Clinical data warehouses, which have arisen over the last decade, bring together the medical data of millions of patients and offer the potential to train and validate machine learning models in real-world scenarios. The quality of MRIs collected in clinical data warehouses differs significantly from that generally observed in research datasets, reflecting the variability inherent to clinical practice. Consequently, the use of clinical data requires the implementation of robust quality control tools. By using a substantial number of pre-existing manually labelled T1-weighted MR images (5,500) alongside a smaller set of newly labelled FLAIR images (926), we present a novel semi-supervised adversarial domain adaptation architecture designed to exploit shared representations between MRI sequences thanks to a shared feature extractor, while taking into account the specificities of the FLAIR thanks to a specific classification head for each sequence. This architecture thus consists of a common invariant feature extractor, a domain classifier and two classification heads specific to the source and target, all designed to effectively deal with potential class distribution shifts between the source and target data classes. The primary objectives of this paper were: (1) to identify images which are not proper 3D FLAIR brain MRIs; (2) to rate the overall image quality. For the first objective, our approach demonstrated excellent results, with a balanced accuracy of 89%, comparable to that of human raters. For the second objective, our approach achieved good performance, although lower than that of human raters. Nevertheless, the automatic approach accurately identified bad quality images (balanced accuracy >79%). In conclusion, our proposed approach overcomes the initial barrier of heterogeneous image quality in clinical data warehouses, thereby facilitating the development of new research using clinical routine 3D FLAIR brain images.

Embolic protection devices (EPDs) used during carotid artery stenting (CAS) are crucial in reducing ischemic complications. Although minimizing the filter-type EPD movement is considered important, limited research has demonstrated this practice. We used an artificial intelligence (AI)-based device recognition technology to investigate the correlation between filter movements and ischemic complications. We retrospectively studied 28 consecutive patients who underwent CAS using FilterWire EZ (Boston Scientific, Marlborough, MA, USA) from April 2022 to September 2023. Clinical data, procedural videos, and postoperative magnetic resonance imaging were collected. An AI-based device detection function in the Neuro-Vascular Assist (iMed Technologies, Tokyo, Japan) was used to quantify the filter movement. Multivariate proportional odds model analysis was performed to explore the correlations between postoperative diffusion-weighted imaging (DWI) hyperintense lesions and potential ischemic risk factors, including filter movement. In total, 23 patients had sufficient information and were eligible for quantitative analysis. Fourteen patients (60.9 %) showed postoperative DWI hyperintense lesions. Multivariate analysis revealed significant associations between filter movement distance (odds ratio, 1.01; 95 % confidence interval, 1.00-1.02; p = 0.003) and high-intensity signals in time-of-flight magnetic resonance angiography with DWI hyperintense lesions. Age, symptomatic status, and operative time were not significantly correlated. Increased filter movement during CAS was correlated with a higher incidence of postoperative DWI hyperintense lesions. AI-based quantitative evaluation of endovascular techniques may enable demonstration of previously unproven recommendations. To the best of our knowledge, this is the first study to use an AI system for quantitative evaluation to address real-world clinical issues.

Increasing evidence suggests that primary trigeminal neuralgia (TN), including classical TN (CTN) and idiopathic TN (ITN), share biological, neuropsychological, and clinical features, despite differing diagnostic criteria. Neuroimaging studies have shown neurovascular compression (NVC) differences in these disorders. However, changes in brain dynamics across these two TN subtypes remain unknown. The authors aimed to examine the functional connectivity differences in CTN, ITN, and pain-free controls. A total of 93 subjects, 50 TN patients and 43 pain-free controls, underwent resting-state functional magnetic resonance imaging (rs-fMRI). All TN patients underwent surgery, and the NVC type was verified. Functional connectivity and spontaneous brain activity were analyzed, and the significant alterations in rs-fMRI indices were selected to train classification models. The patients with TN showed increased connectivity between several brain regions, such as the medial prefrontal cortex (mPFC) and left planum temporale and decreased connectivity between the mPFC and left superior frontal gyrus. CTN patients exhibited a further reduction in connectivity between the left insular lobe and left occipital pole. Compared to controls, TN patients had heightened neural activity in the frontal regions. The CTN patients showed reduced activity in the right temporal pole compared to that in the ITN patients. These patterns effectively distinguished TN patients from controls, with an accuracy of 74.19% and an area under the receiver operating characteristic curve of 0.80. This study revealed alterations in rs-fMRI metrics in TN patients compared to those in controls and is the first to show differences between CTN and ITN. The support vector machine model of rs-fMRI indices exhibited moderate performance on discriminating TN patients from controls. These findings have unveiled potential biomarkers for TN and its subtypes, which can be used for additional investigation of the pathophysiology of the disease.

Deformable registration is essential in medical image analysis, especially for handling various multi- and mono-modal registration tasks in neuroimaging. Existing studies lack exploration of brain MR-CT registration, and face challenges in both accuracy and efficiency improvements of learning-based methods. To enlarge the practice of multi-modal registration in brain, we present SR-Reg, a new benchmark dataset comprising 180 volumetric paired MR-CT images and annotated anatomical regions. Building on this foundation, we introduce MambaMorph, a novel deformable registration network based on an efficient state space model Mamba for global feature learning, with a fine-grained feature extractor for low-level embedding. Experimental results demonstrate that MambaMorph surpasses advanced ConvNet-based and Transformer-based networks across several multi- and mono-modal tasks, showcasing impressive enhancements of efficacy and efficiency. Code and dataset are available at https://github.com/mileswyn/MambaMorph.

To compare clinical ratings and signal-to-noise ratio (SNR) measures of a commercially available Deep Learning-based MRI reconstruction method (T2_(DR)) against conventional T2- turbo spin echo brain MRI (T2_(CN)). 100 consecutive patients with various neurological conditions underwent both T2_(DR) and T2_(CN) on a Siemens Vida 3 T scanner with a 64-channel head coil in the same examination. Acquisition times were 3.33 min for T2_(CN) and 1.04 min for T2_(DR). Four neuroradiologists evaluated overall image quality (OIQ), diagnostic safety (DS), and image artifacts (IA), blinded to the acquisition mode. SNR and SNR_eff (adjusted for acquisition time) were calculated for air, grey- and white matter, and cerebrospinal fluid. The mean patient age was 43.6 years (SD 20.3), with 54 females. The distribution of non-diagnostic ratings did not differ significantly between T2_(CN) and T2_(DR) (IA p = 0.108; OIQ: p = 0.700 and DS: p = 0.652). However, when considering the full spectrum of ratings, significant differences favouring T2_(CN) emerged in OIQ (p = 0.003) and IA (p < 0.001). T2_(CN) had higher SNR (157.9, SD 123.4) than T2_(DR) (112.8, SD 82.7), p < 0.001, but T2_(DR) demonstrated superior SNR_eff (14.1, SD 10.3) compared to T2_(CN) (10.8, SD 8.5), p < 0.001. Our results suggest that while T2_(DR) may be clinically applicable for a diagnostic setting, it does not fully match the quality of high-standard conventional T2_(CN), MRI acquisitions.

Reconstructive flap surgery aims to restore the substance and function losses associated with tumor resection. Automatic flap segmentation could allow quantification of flap volume and correlations with functional outcomes after surgery or post-operative RT (poRT). Flaps being ectopic tissues of various components (fat, skin, fascia, muscle, bone) of various volume, shape and texture, the anatomical modifications, inflammation and edema of the postoperative bed make the segmentation task challenging. We built a artificial intelligence-enabled automatic soft-tissue flap segmentation method from CT scans of Head and Neck Cancer (HNC) patients. Ground-truth flap segmentation masks were delineated by two experts on postoperative CT scans of 148 HNC patients undergoing poRT. All CTs and flaps (free or pedicled, soft tissue only or bone) were kept, including those with artefacts, to ensure generalizability. A deep-learning nnUNetv2 framework was built using Hounsfield Units (HU) windowing to mimic radiological assessment. A transformer-based 2D "Segment Anything Model" (MedSAM) was also built and fine-tuned to medical CTs. Models were compared with the Dice Similarity Coefficient (DSC) and Hausdorff Distance 95th percentile (HD95) metrics. Flaps were in the oral cavity (N = 102), oropharynx (N = 26) or larynx/hypopharynx (N = 20). There were free flaps (N = 137), pedicled flaps (N = 11), of soft tissue flap-only (N = 92), reconstructed bone (N = 42), or bone resected without reconstruction (N = 40). The nnUNet-windowing model outperformed the nnUNetv2 and MedSam models. It achieved mean DSCs of 0.69 and HD95 of 25.6 mm using 5-fold cross-validation. Segmentation performed better in the absence of artifacts, and rare situations such as pedicled flaps, laryngeal primaries and resected bone without bone reconstruction (p < 0.01). Automatic flap segmentation demonstrates clinical performances that allow to quantify spontaneous and radiation-induced volume shrinkage of flaps. Free flaps achieved excellent performances; rare situations will be addressed by fine-tuning the network.

AI-driven scan time reduction is rapidly transforming medical imaging with benefits such as improved patient comfort and enhanced efficiency. A Dual Contrastive Learning Generative Adversarial Network (DCLGAN) was developed to predict full-time PET scans from shorter, noisier scans, improving challenges in imaging patients with movement disorders. 18F FP-CIT PET/CT data from 391 patients with suspected Parkinsonism were used [250 training/validation, 141 testing (hospital A)]. Ground truth (GT) images were reconstructed from 15-minute scans, while denoised images (DIs) were generated from 1-, 3-, 5-, and 10-minute scans. Image quality was assessed using normalized root mean square error (NRMSE), peak signal-to-noise ratio (PSNR), structural similarity index measure (SSIM), visual analysis, and clinical metrics like BPND and ISR for diagnosis of non-neurodegenerative Parkinson disease (NPD), idiopathic PD (IPD), and atypical PD (APD). External validation used data from 2 hospitals with different scanners (hospital B: 1-, 3-, 5-, and 10-min; hospital C: 1-, 3-, and 5-min). In addition, motion artifact reduction was evaluated using the Dice similarity coefficient (DSC). In hospital A, NRMSE, PSNR, and SSIM values improved with scan duration, with the 5-minute DIs achieving optimal quality (NRMSE 0.008, PSNR 42.13, SSIM 0.98). Visual analysis rated DIs from scans ≥3 minutes as adequate or higher. The mean BPND differences (95% CI) for each DIs were 0.19 (-0.01, 0.40), 0.11 (-0.02, 0.24), 0.08 (-0.03, 0.18), and 0.01 (-0.06, 0.07), with the CIs significantly decreasing. ISRs with the highest effect sizes for differentiating NPD, IPD, and APD (PP/AP, PP/VS, PC/VP) remained stable post-denoising. External validation showed 10-minute DIs (hospital B) and 1-minute DIs (hospital C) reached benchmarks of hospital A's image quality metrics, with similar trends in visual analysis and BPND CIs. Furthermore, motion artifact correction in 9 patients yielded DSC improvements from 0.89 to 0.95 in striatal regions. The DL-model is capable of generating high-quality 18F FP-CIT PET images from shorter scans to enhance patient comfort, minimize motion artifacts, and maintain diagnostic precision. Furthermore, our study plays an important role in providing insights into how imaging quality assessment metrics can be used to determine the appropriate scan duration for different scanners with varying sensitivities.