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Accelerated deep learning-based function assessment in cardiovascular magnetic resonance.

De Santis D, Fanelli F, Pugliese L, Bona GG, Polidori T, Santangeli C, Polici M, Del Gaudio A, Tremamunno G, Zerunian M, Laghi A, Caruso D

pubmed logopapersMay 17 2025
To evaluate diagnostic accuracy and image quality of deep learning (DL) cine sequences for LV and RV parameters compared to conventional balanced steady-state free precession (bSSFP) cine sequences in cardiovascular magnetic resonance (CMR). From January to April 2024, patients with clinically indicated CMR were prospectively included. LV and RV were segmented from short-axis bSSFP and DL cine sequences. LV and RV end-diastolic volume (EDV), end-systolic volume (EDV), stroke volume (SV), ejection fraction, and LV end-diastolic mass were calculated. The acquisition time of both sequences was registered. Results were compared with paired-samples t test or Wilcoxon signed-rank test. Agreement between DL cine and bSSFP was assessed using Bland-Altman plots. Image quality was graded by two readers based on blood-to-myocardium contrast, endocardial edge definition, and motion artifacts, using a 5-point Likert scale (1 = insufficient quality; 5 = excellent quality). Sixty-two patients were included (mean age: 47 ± 17 years, 41 men). No significant differences between DL cine and bSSFP were found for all LV and RV parameters (P ≥ .176). DL cine was significantly faster (1.35 ± .55 m vs 2.83 ± .79 m; P < .001). The agreement between DL cine and bSSFP was strong, with bias ranging from 45 to 1.75% for LV and from - 0.38 to 2.43% for RV. Among LV parameters, the highest agreement was obtained for ESV and SV, which fell within the acceptable limit of agreement (LOA) in 84% of cases. EDV obtained the highest agreement among RV parameters, falling within the acceptable LOA in 90% of cases. Overall image quality was comparable (median: 5, IQR: 4-5; P = .330), while endocardial edge definition of DL cine (median: 4, IQR: 4-5) was lower than bSSFP (median: 5, IQR: 4-5; P = .002). DL cine allows fast and accurate quantification of LV and RV parameters and comparable image quality with conventional bSSFP.

Computer-aided assessment for enlarged fetal heart with deep learning model.

Nurmaini S, Sapitri AI, Roseno MT, Rachmatullah MN, Mirani P, Bernolian N, Darmawahyuni A, Tutuko B, Firdaus F, Islami A, Arum AW, Bastian R

pubmed logopapersMay 16 2025
Enlarged fetal heart conditions may indicate congenital heart diseases or other complications, making early detection through prenatal ultrasound essential. However, manual assessments by sonographers are often subjective, time-consuming, and inconsistent. This paper proposes a deep learning approach using the You Only Look Once (YOLO) architecture to automate fetal heart enlargement assessment. Using a set of ultrasound videos, YOLOv8 with a CBAM module demonstrated superior performance compared to YOLOv11 with self-attention. Incorporating the ResNeXtBlock-a residual network with cardinality-additionally enhanced accuracy and prediction consistency. The model exhibits strong capability in detecting fetal heart enlargement, offering a reliable computer-aided tool for sonographers during prenatal screenings. Further validation is required to confirm its clinical applicability. By improving early and accurate detection, this approach has the potential to enhance prenatal care, facilitate timely interventions, and contribute to better neonatal health outcomes.

Pretrained hybrid transformer for generalizable cardiac substructures segmentation from contrast and non-contrast CTs in lung and breast cancers

Aneesh Rangnekar, Nikhil Mankuzhy, Jonas Willmann, Chloe Choi, Abraham Wu, Maria Thor, Andreas Rimner, Harini Veeraraghavan

arxiv logopreprintMay 16 2025
AI automated segmentations for radiation treatment planning (RTP) can deteriorate when applied in clinical cases with different characteristics than training dataset. Hence, we refined a pretrained transformer into a hybrid transformer convolutional network (HTN) to segment cardiac substructures lung and breast cancer patients acquired with varying imaging contrasts and patient scan positions. Cohort I, consisting of 56 contrast-enhanced (CECT) and 124 non-contrast CT (NCCT) scans from patients with non-small cell lung cancers acquired in supine position, was used to create oracle with all 180 training cases and balanced (CECT: 32, NCCT: 32 training) HTN models. Models were evaluated on a held-out validation set of 60 cohort I patients and 66 patients with breast cancer from cohort II acquired in supine (n=45) and prone (n=21) positions. Accuracy was measured using DSC, HD95, and dose metrics. Publicly available TotalSegmentator served as the benchmark. The oracle and balanced models were similarly accurate (DSC Cohort I: 0.80 \pm 0.10 versus 0.81 \pm 0.10; Cohort II: 0.77 \pm 0.13 versus 0.80 \pm 0.12), outperforming TotalSegmentator. The balanced model, using half the training cases as oracle, produced similar dose metrics as manual delineations for all cardiac substructures. This model was robust to CT contrast in 6 out of 8 substructures and patient scan position variations in 5 out of 8 substructures and showed low correlations of accuracy to patient size and age. A HTN demonstrated robustly accurate (geometric and dose metrics) cardiac substructures segmentation from CTs with varying imaging and patient characteristics, one key requirement for clinical use. Moreover, the model combining pretraining with balanced distribution of NCCT and CECT scans was able to provide reliably accurate segmentations under varied conditions with far fewer labeled datasets compared to an oracle model.

Patient-Specific Dynamic Digital-Physical Twin for Coronary Intervention Training: An Integrated Mixed Reality Approach

Shuo Wang, Tong Ren, Nan Cheng, Rong Wang, Li Zhang

arxiv logopreprintMay 16 2025
Background and Objective: Precise preoperative planning and effective physician training for coronary interventions are increasingly important. Despite advances in medical imaging technologies, transforming static or limited dynamic imaging data into comprehensive dynamic cardiac models remains challenging. Existing training systems lack accurate simulation of cardiac physiological dynamics. This study develops a comprehensive dynamic cardiac model research framework based on 4D-CTA, integrating digital twin technology, computer vision, and physical model manufacturing to provide precise, personalized tools for interventional cardiology. Methods: Using 4D-CTA data from a 60-year-old female with three-vessel coronary stenosis, we segmented cardiac chambers and coronary arteries, constructed dynamic models, and implemented skeletal skinning weight computation to simulate vessel deformation across 20 cardiac phases. Transparent vascular physical models were manufactured using medical-grade silicone. We developed cardiac output analysis and virtual angiography systems, implemented guidewire 3D reconstruction using binocular stereo vision, and evaluated the system through angiography validation and CABG training applications. Results: Morphological consistency between virtual and real angiography reached 80.9%. Dice similarity coefficients for guidewire motion ranged from 0.741-0.812, with mean trajectory errors below 1.1 mm. The transparent model demonstrated advantages in CABG training, allowing direct visualization while simulating beating heart challenges. Conclusion: Our patient-specific digital-physical twin approach effectively reproduces both anatomical structures and dynamic characteristics of coronary vasculature, offering a dynamic environment with visual and tactile feedback valuable for education and clinical planning.

Texture-based probability mapping for automatic assessment of myocardial injury in late gadolinium enhancement images after revascularized STEMI.

Frøysa V, Berg GJ, Singsaas E, Eftestøl T, Woie L, Ørn S

pubmed logopapersMay 15 2025
Late Gadolinium-enhancement in cardiac magnetic resonance imaging (LGE-CMR) is the gold standard for assessing myocardial infarction (MI) size. Texture-based probability mapping (TPM) is a novel machine learning-based analysis of LGE images of myocardial injury. The ability of TPM to assess acute myocardial injury has not been determined. This proof-of-concept study aimed to determine how TPM responds to the dynamic changes in myocardial injury during one-year follow-up after a first-time revascularized acute MI. 41 patients with first-time acute ST-elevation MI and single-vessel occlusion underwent successful PCI. LGE-CMR images were obtained 2 days, 1 week, 2 months, and 1 year following MI. TPM size was compared with manual LGE-CMR based MI size, LV remodeling, and biomarkers. TPM size remained larger than MI by LGE-CMR at all time points, decreasing from 2 days to 2 months (p < 0.001) but increasing from 2 months to 1 year (p < 0.01). TPM correlated strongly with peak Troponin T (p < 0.001) and NT-proBNP (p < 0.001). At 1 week, 2 months, and 1 year, TPM showed a stronger correlation with NT-proBNP than MI size by LGE-CMR. Analyzing all collected pixels from 2 months to 1 year revealed a general increase in pixel scar probability in both the infarcted and non-infarcted regions. This proof-of-concept study suggests that TPM may offer additional insights into myocardial alterations in both infarcted and non-infarcted regions following acute MI. These findings indicate a potential role for TPM in assessing the overall myocardial response to infarction and the subsequent healing and remodeling process.

Data-Agnostic Augmentations for Unknown Variations: Out-of-Distribution Generalisation in MRI Segmentation

Puru Vaish, Felix Meister, Tobias Heimann, Christoph Brune, Jelmer M. Wolterink

arxiv logopreprintMay 15 2025
Medical image segmentation models are often trained on curated datasets, leading to performance degradation when deployed in real-world clinical settings due to mismatches between training and test distributions. While data augmentation techniques are widely used to address these challenges, traditional visually consistent augmentation strategies lack the robustness needed for diverse real-world scenarios. In this work, we systematically evaluate alternative augmentation strategies, focusing on MixUp and Auxiliary Fourier Augmentation. These methods mitigate the effects of multiple variations without explicitly targeting specific sources of distribution shifts. We demonstrate how these techniques significantly improve out-of-distribution generalization and robustness to imaging variations across a wide range of transformations in cardiac cine MRI and prostate MRI segmentation. We quantitatively find that these augmentation methods enhance learned feature representations by promoting separability and compactness. Additionally, we highlight how their integration into nnU-Net training pipelines provides an easy-to-implement, effective solution for enhancing the reliability of medical segmentation models in real-world applications.

Using Foundation Models as Pseudo-Label Generators for Pre-Clinical 4D Cardiac CT Segmentation

Anne-Marie Rickmann, Stephanie L. Thorn, Shawn S. Ahn, Supum Lee, Selen Uman, Taras Lysyy, Rachel Burns, Nicole Guerrera, Francis G. Spinale, Jason A. Burdick, Albert J. Sinusas, James S. Duncan

arxiv logopreprintMay 14 2025
Cardiac image segmentation is an important step in many cardiac image analysis and modeling tasks such as motion tracking or simulations of cardiac mechanics. While deep learning has greatly advanced segmentation in clinical settings, there is limited work on pre-clinical imaging, notably in porcine models, which are often used due to their anatomical and physiological similarity to humans. However, differences between species create a domain shift that complicates direct model transfer from human to pig data. Recently, foundation models trained on large human datasets have shown promise for robust medical image segmentation; yet their applicability to porcine data remains largely unexplored. In this work, we investigate whether foundation models can generate sufficiently accurate pseudo-labels for pig cardiac CT and propose a simple self-training approach to iteratively refine these labels. Our method requires no manually annotated pig data, relying instead on iterative updates to improve segmentation quality. We demonstrate that this self-training process not only enhances segmentation accuracy but also smooths out temporal inconsistencies across consecutive frames. Although our results are encouraging, there remains room for improvement, for example by incorporating more sophisticated self-training strategies and by exploring additional foundation models and other cardiac imaging technologies.

Single View Echocardiographic Analysis for Left Ventricular Outflow Tract Obstruction Prediction in Hypertrophic Cardiomyopathy: A Deep Learning Approach

Kim, J., Park, J., Jeon, J., Yoon, Y. E., Jang, Y., Jeong, H., Lee, S.-A., Choi, H.-M., Hwang, I.-C., Cho, G.-Y., Chang, H.-J.

medrxiv logopreprintMay 14 2025
BackgroundAccurate left ventricular outflow tract obstruction (LVOTO) assessment is crucial for hypertrophic cardiomyopathy (HCM) management and prognosis. Traditional methods, requiring multiple views, Doppler, and provocation, is often infeasible, especially where resources are limited. This study aimed to develop and validate a deep learning (DL) model capable of predicting severe LVOTO in HCM patients using only the parasternal long-axis (PLAX) view from transthoracic echocardiography (TTE). MethodsA DL model was trained on PLAX videos extracted from TTE examinations (developmental dataset, n=1,007) to capture both morphological and dynamic motion features, generating a DL index for LVOTO (DLi-LVOTO, range 0-100). Performance was evaluated in an internal test dataset (ITDS, n=87) and externally validated in the distinct hospital dataset (DHDS, n=1,334) and the LVOTO reduction treatment dataset (n=156). ResultsThe model achieved high accuracy in detecting severe LVOTO (pressure gradient[&ge;] 50mmHg), with area under the receiver operating characteristics curve (AUROC) of 0.97 (95% confidence interval: 0.92-1.00) in ITDS and 0.93 (0.92-0.95) in DHDS. At a DLi-LVOTO threshold of 70, the model demonstrated a specificity of 97.3% and negative predictive value (NPV) of 96.1% in ITDS. In DHDS, a cutoff of 60 yielded a specificity of 94.6% and NPV of 95.5%. DLi-LVOTO also decreased significantly after surgical myectomy or Mavacamten treatment, correlating with reductions in peak pressure gradient (p<0.001 for all). ConclusionsOur DL-based approach predicts severe LVOTO using only the PLAX view from TTE, serving as a complementary tool, particularly in resource-limited settings or when Doppler is unavailable, and for monitoring treatment response.

Congenital Heart Disease recognition using Deep Learning/Transformer models

Aidar Amangeldi, Vladislav Yarovenko, Angsar Taigonyrov

arxiv logopreprintMay 13 2025
Congenital Heart Disease (CHD) remains a leading cause of infant morbidity and mortality, yet non-invasive screening methods often yield false negatives. Deep learning models, with their ability to automatically extract features, can assist doctors in detecting CHD more effectively. In this work, we investigate the use of dual-modality (sound and image) deep learning methods for CHD diagnosis. We achieve 73.9% accuracy on the ZCHSound dataset and 80.72% accuracy on the DICOM Chest X-ray dataset.

Deep Learning-Derived Cardiac Chamber Volumes and Mass From PET/CT Attenuation Scans: Associations With Myocardial Flow Reserve and Heart Failure.

Hijazi W, Shanbhag A, Miller RJH, Kavanagh PB, Killekar A, Lemley M, Wopperer S, Knight S, Le VT, Mason S, Acampa W, Rosamond T, Dey D, Berman DS, Chareonthaitawee P, Di Carli MF, Slomka PJ

pubmed logopapersMay 13 2025
Computed tomography (CT) attenuation correction scans are an intrinsic part of positron emission tomography (PET) myocardial perfusion imaging using PET/CT, but anatomic information is rarely derived from these ultralow-dose CT scans. We aimed to assess the association between deep learning-derived cardiac chamber volumes (right atrial, right ventricular, left ventricular, and left atrial) and mass (left ventricular) from these scans with myocardial flow reserve and heart failure hospitalization. We included 18 079 patients with consecutive cardiac PET/CT from 6 sites. A deep learning model estimated cardiac chamber volumes and left ventricular mass from computed tomography attenuation correction imaging. Associations between deep learning-derived CT mass and volumes with heart failure hospitalization and reduced myocardial flow reserve were assessed in a multivariable analysis. During a median follow-up of 4.3 years, 1721 (9.5%) patients experienced heart failure hospitalization. Patients with 3 or 4 abnormal chamber volumes were 7× more likely to be hospitalized for heart failure compared with patients with normal volumes. In adjusted analyses, left atrial volume (hazard ratio [HR], 1.25 [95% CI, 1.19-1.30]), right atrial volume (HR, 1.29 [95% CI, 1.23-1.35]), right ventricular volume (HR, 1.25 [95% CI, 1.20-1.31]), left ventricular volume (HR, 1.27 [95% CI, 1.23-1.35]), and left ventricular mass (HR, 1.25 [95% CI, 1.18-1.32]) were independently associated with heart failure hospitalization. In multivariable analyses, left atrial volume (odds ratio, 1.14 [95% CI, 1.0-1.19]) and ventricular mass (odds ratio, 1.12 [95% CI, 1.6-1.17]) were independent predictors of reduced myocardial flow reserve. Deep learning-derived chamber volumes and left ventricular mass from computed tomography attenuation correction were predictive of heart failure hospitalization and reduced myocardial flow reserve in patients undergoing cardiac PET perfusion imaging. This anatomic data can be routinely reported along with other PET/CT parameters to improve risk prediction.
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