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CARDIAC-FM: A Multimodal Foundation Model for Cardiovascular Risk Prediction Using ECG and Cardiac MRI

March 18, 2026medrxiv logopreprint

Authors

Li, F.,Li, S.,Qian, Y.,Chen, B.,Brody, J. A.,Yogeswaran, V.,Wiggins, K. L.,Sitlani, C. M.,Bis, J. C.,Shojaie, A.,Longstreth, W. T.,Psaty, B. M.,Tison, G. H.,Du, S.,Floyd, J. S.,Ye, T.

Affiliations (1)

  • Department of Biostatistics, University of Washington, Seattle, WA, USA

Abstract

Atrial fibrillation and heart failure impose substantial health burdens worldwide, yet existing prediction models lack sufficient accuracy and generalizability. We developed CARDIAC-FM, a multimodal foundation model that learns joint representations of 12-lead electrocardiogram (ECG) and cardiac magnetic resonance imaging (MRI) through contrastive learning. We trained CARDIAC-FM on 57,609 paired ECG-cardiac MRI samples from UK Biobank and evaluated it in two external cohorts: the Cardiovascular Health Study (CHS) and the Multi-Ethnic Study of Atherosclerosis (MESA). CARDIAC-FM consistently outperformed unimodal models across all cohorts, and jointly incorporating ECG features with established clinical risk scores yielded additive gains in discrimination, indicating that ECG and traditional risk factors capture complementary dimensions of cardiovascular risk. The learned representations improved prediction across a range of cardiovascular outcomes with minimal task-specific fine-tuning, reflecting real-world settings where many diseases have limited positive samples and lack dedicated risk models. Although trained on paired ECG and MRI data, CARDIAC-FM generates predictions using ECG alone or ECG combined with established risk scores, enabling broad clinical deployment without MRI. These findings demonstrate the promise of multimodal pre-training for generalizable cardiovascular risk prediction.

Topics

cardiovascular medicine

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