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Page 136 of 1981980 results

Real-time brain tumor detection in intraoperative ultrasound: From model training to deployment in the operating room.

Cepeda S, Esteban-Sinovas O, Romero R, Singh V, Shett P, Moiyadi A, Zemmoura I, Giammalva GR, Del Bene M, Barbotti A, DiMeco F, West TR, Nahed BV, Arrese I, Hornero R, Sarabia R

pubmed logopapersMay 30 2025
Intraoperative ultrasound (ioUS) is a valuable tool in brain tumor surgery due to its versatility, affordability, and seamless integration into the surgical workflow. However, its adoption remains limited, primarily because of the challenges associated with image interpretation and the steep learning curve required for effective use. This study aimed to enhance the interpretability of ioUS images by developing a real-time brain tumor detection system deployable in the operating room. We collected 2D ioUS images from the BraTioUS and ReMIND datasets, annotated with expert-refined tumor labels. Using the YOLO11 architecture and its variants, we trained object detection models to identify brain tumors. The dataset included 1732 images from 192 patients, divided into training, validation, and test sets. Data augmentation expanded the training set to 11,570 images. In the test dataset, YOLO11s achieved the best balance of precision and computational efficiency, with a mAP@50 of 0.95, mAP@50-95 of 0.65, and a processing speed of 34.16 frames per second. The proposed solution was prospectively validated in a cohort of 20 consecutively operated patients diagnosed with brain tumors. Neurosurgeons confirmed its seamless integration into the surgical workflow, with real-time predictions accurately delineating tumor regions. These findings highlight the potential of real-time object detection algorithms to enhance ioUS-guided brain tumor surgery, addressing key challenges in interpretation and providing a foundation for future development of computer vision-based tools for neuro-oncological surgery.

Using Deep learning to Predict Cardiovascular Magnetic Resonance Findings from Echocardiography Videos.

Sahashi Y, Vukadinovic M, Duffy G, Li D, Cheng S, Berman DS, Ouyang D, Kwan AC

pubmed logopapersMay 30 2025
Echocardiography is the most common modality for assessing cardiac structure and function. While cardiac magnetic resonance (CMR) imaging is less accessible, CMR can provide unique tissue characterization including late gadolinium enhancement (LGE), T1 and T2 mapping, and extracellular volume (ECV) which are associated with tissue fibrosis, infiltration, and inflammation. Deep learning has been shown to uncover findings not recognized by clinicians, however it is unknown whether CMR-based tissue characteristics can be derived from echocardiography videos using deep learning. To assess the performance of a deep learning model applied to echocardiography to detect CMR-specific parameters including LGE presence, and abnormal T1, T2 or ECV. In a retrospective single-center study, adult patients with CMRs and echocardiography studies within 30 days were included. A video-based convolutional neural network was trained on echocardiography videos to predict CMR-derived labels including LGE presence, and abnormal T1, T2 or ECV across echocardiography views. The model was also trained to predict presence/absence of wall motion abnormality (WMA) as a positive control for model function. The model performance was evaluated in a held-out test dataset not used for training. The study population included 1,453 adult patients (mean age 56±18 years, 42% female) with 2,556 paired echocardiography studies occurring at a median of 2 days after CMR (interquartile range 2 days prior to 6 days after). The model had high predictive capability for presence of WMA (AUC 0.873 [95%CI 0.816-0.922]) which was used for positive control. However, the model was unable to reliably detect the presence of LGE (AUC 0.699 [0.613-0.780]), abnormal native T1 (AUC 0.614 [0.500-0.715]), T2 0.553 [0.420-0.692], or ECV 0.564 [0.455-0.691]). Deep learning applied to echocardiography accurately identified CMR-based WMA, but was unable to predict tissue characteristics, suggesting that signal for these tissue characteristics may not be present within ultrasound videos, and that the use of CMR for tissue characterization remains essential within cardiology.

The Impact of Model-based Deep-learning Reconstruction Compared with that of Compressed Sensing-Sensitivity Encoding on the Image Quality and Precision of Cine Cardiac MR in Evaluating Left-ventricular Volume and Strain: A Study on Healthy Volunteers.

Tsuneta S, Aono S, Kimura R, Kwon J, Fujima N, Ishizaka K, Nishioka N, Yoneyama M, Kato F, Minowa K, Kudo K

pubmed logopapersMay 30 2025
To evaluate the effect of model-based deep-learning reconstruction (DLR) compared with that of compressed sensing-sensitivity encoding (CS) on cine cardiac magnetic resonance (CMR). Cine CMR images of 10 healthy volunteers were obtained with reduction factors of 2, 4, 6, and 8 and reconstructed using CS and DLR. The visual image quality scores assessed sharpness, image noise, and artifacts. Left-ventricular (LV) end-diastolic volume (EDV), end-systolic volume (ESV), stroke volume (SV), and ejection fraction (EF) were manually measured. LV global circumferential strain (GCS) was automatically measured using the software. The precision of EDV, ESV, SV, EF, and GCS measurements was compared between CS and DLR using Bland-Altman analysis with full-sampling data as the gold standard. Compared with CS, DLR significantly improved image quality with reduction factors of 6 and 8. The precision of EDV and ESV with a reduction factor of 8, and GCS with reduction factors of 6 and 8 measurements improved with DLR compared with CS, whereas those of SV and EF measurements were not different between DLR and CS. The effect of DLR on cine CMR's image quality and precision in evaluating quantitative volume and strain was equal or superior to that of CS. DLR may replace CS for cine CMR.

Combining structural equation modeling analysis with machine learning for early malignancy detection in Bethesda Category III thyroid nodules.

Kasap ZA, Kurt B, Güner A, Özsağır E, Ercin ME

pubmed logopapersMay 30 2025
Atypia of Undetermined Significance (AUS), classified as Category III in the Bethesda Thyroid Cytopathology Reporting System, presents significant diagnostic challenges for clinicians. This study aims to develop a clinical decision support system that integrates structural equation modeling (SEM) and machine learning to predict malignancy in AUS thyroid nodules. The model integrates preoperative clinical data, ultrasonography (USG) findings, and cytopathological and morphometric variables. This retrospective cohort study was conducted between 2011 and 2019 at Karadeniz Technical University (KTU) Farabi Hospital. The dataset included 56 variables derived from 204 thyroid nodules diagnosed via ultrasound-guided fine-needle aspiration biopsy (FNAB) in 183 patients over 18 years. Logistic regression (LR) and SEM were used to identify risk factors for early thyroid cancer detection. Subsequently, machine learning algorithms-including Support Vector Machines (SVM), Naive Bayes (NB), and Decision Trees (DT) were used to construct decision support models. After feature selection with SEM, the SVM model achieved the highest performance, with an accuracy of 82 %, a specificity of 97 %, and an AUC value of 84 %. Additional models were developed for different scenarios, and their performance metrics were compared. Accurate preoperative prediction of malignancy in thyroid nodules is crucial for avoiding unnecessary surgeries. The proposed model supports more informed clinical decision-making by effectively identifying benign cases, thereby reducing surgical risk and improving patient care.

Evaluation of uncertainty estimation methods in medical image segmentation: Exploring the usage of uncertainty in clinical deployment.

Li S, Yuan M, Dai X, Zhang C

pubmed logopapersMay 30 2025
Uncertainty estimation methods are essential for the application of artificial intelligence (AI) models in medical image segmentation, particularly in addressing reliability and feasibility challenges in clinical deployment. Despite their significance, the adoption of uncertainty estimation methods in clinical practice remains limited due to the lack of a comprehensive evaluation framework tailored to their clinical usage. To address this gap, a simulation of uncertainty-assisted clinical workflows is conducted, highlighting the roles of uncertainty in model selection, sample screening, and risk visualization. Furthermore, uncertainty evaluation is extended to pixel, sample, and model levels to enable a more thorough assessment. At the pixel level, the Uncertainty Confusion Metric (UCM) is proposed, utilizing density curves to improve robustness against variability in uncertainty distributions and to assess the ability of pixel uncertainty to identify potential errors. At the sample level, the Expected Segmentation Calibration Error (ESCE) is introduced to provide more accurate calibration aligned with Dice, enabling more effective identification of low-quality samples. At the model level, the Harmonic Dice (HDice) metric is developed to integrate uncertainty and accuracy, mitigating the influence of dataset biases and offering a more robust evaluation of model performance on unseen data. Using this systematic evaluation framework, five mainstream uncertainty estimation methods are compared on organ and tumor datasets, providing new insights into their clinical applicability. Extensive experimental analyses validated the practicality and effectiveness of the proposed metrics. This study offers clear guidance for selecting appropriate uncertainty estimation methods in clinical settings, facilitating their integration into clinical workflows and ultimately improving diagnostic efficiency and patient outcomes.

Classification of biomedical lung cancer images using optimized binary bat technique by constructing oblique decision trees.

Aswal S, Ahuja NJ, Mehra R

pubmed logopapersMay 29 2025
Due to imbalanced data values and high-dimensional features of lung cancer from CT scans images creates significant challenges in clinical research. The improper classification of these images leads towards higher complexity in classification process. These critical issues compromise the extraction of biomedical traits and also design incomplete classification of lung cancer. As the conventional approaches are partially successful in dealing with the complex nature of high-dimensional and imbalanced biomedical data for lung cancer classification. Thus, there is a crucial need to develop a robust classification technique which can address these major concerns in the classification of lung cancer images. In this paper, we propose a novel structural formation of the oblique decision tree (OBT) using a swarm intelligence technique, namely, the Binary Bat Swarm Algorithm (BBSA). The application of BBSA enables a competitive recognition rate to make structural reforms while building OBT. Such integration improves the ability of the machine learning swarm classifier (MLSC) to handle high-dimensional features and imbalanced biomedical datasets. The adaptive feature selection using BBSA allows for the exploration and selection of relevant features required for classification from ODT. The ODT classifier introduces flexibility in decision boundaries, which enables it to capture complex linkages between biomedical data. The proposed MLSC model effectively handles high-dimensional, imbalanced lung cancer datasets using TCGA_LUSC_2016 and TCGA_LUAD_2016 modalities, achieving superior precision, recall, F-measure, and execution efficiency. The experiments are conducted in Python to evaluate the performance metrics that consistently demonstrate enhanced classification accuracy and reduced misclassification rates compared to existing methods. The MLSC is assessed in terms of both qualitative and quantitative measurements to study the capability of the proposed MLSC in classifying the instances more effectively than the conventional state-of-the-art methods.

Deep learning enables fast and accurate quantification of MRI-guided near-infrared spectral tomography for breast cancer diagnosis.

Feng J, Tang Y, Lin S, Jiang S, Xu J, Zhang W, Geng M, Dang Y, Wei C, Li Z, Sun Z, Jia K, Pogue BW, Paulsen KD

pubmed logopapersMay 29 2025
The utilization of magnetic resonance (MR) im-aging to guide near-infrared spectral tomography (NIRST) shows significant potential for improving the specificity and sensitivity of breast cancer diagnosis. However, the ef-ficiency and accuracy of NIRST image reconstruction have been limited by the complexities of light propagation mod-eling and MRI image segmentation. To address these chal-lenges, we developed and evaluated a deep learning-based approach for MR-guided 3D NIRST image reconstruction (DL-MRg-NIRST). Using a network trained on synthetic data, the DL-MRg-NIRST system reconstructed images from data acquired during 38 clinical imaging exams of pa-tients with breast abnormalities. Statistical analysis of the results demonstrated a sensitivity of 87.5%, a specificity of 92.9%, and a diagnostic accuracy of 89.5% in distinguishing pathologically defined benign from malignant lesions. Ad-ditionally, the combined use of MRI and DL-MRg-NIRST di-agnoses achieved an area under the receiver operating characteristic (ROC) curve of 0.98. Remarkably, the DL-MRg-NIRST image reconstruction process required only 1.4 seconds, significantly faster than state-of-the-art MR-guided NIRST methods.

Manual and automated facial de-identification techniques for patient imaging with preservation of sinonasal anatomy.

Ding AS, Nagururu NV, Seo S, Liu GS, Sahu M, Taylor RH, Creighton FX

pubmed logopapersMay 29 2025
Facial recognition of reconstructed computed tomography (CT) scans poses patient privacy risks, necessitating reliable facial de-identification methods. Current methods obscure sinuses, turbinates, and other anatomy relevant for otolaryngology. We present a facial de-identification method that preserves these structures, along with two automated workflows for large-volume datasets. A total of 20 adult head CTs from the New Mexico Decedent Image Database were included. Using 3D Slicer, a seed-growing technique was performed to label the skin around the face. This label was dilated bidirectionally to form a 6-mm mask that obscures facial features. This technique was then automated using: (1) segmentation propagation that deforms an atlas head CT and corresponding mask to match other scans and (2) a deep learning model (nnU-Net). Accuracy of these methods against manually generated masks was evaluated with Dice scores and modified Hausdorff distances (mHDs). Manual de-identification resulted in facial match rates of 45.0% (zero-fill), 37.5% (deletion), and 32.5% (re-face). Dice scores for automated face masks using segmentation propagation and nnU-Net were 0.667 ± 0.109 and 0.860 ± 0.029, respectively, with mHDs of 4.31 ± 3.04 mm and 1.55 ± 0.71 mm. Match rates after de-identification using segmentation propagation (zero-fill: 42.5%; deletion: 40.0%; re-face: 35.0%) and nnU-Net (zero-fill: 42.5%; deletion: 35.0%; re-face: 30.0%) were comparable to manual masks. We present a simple facial de-identification approach for head CTs, as well as automated methods for large-scale implementation. These techniques show promise for preventing patient identification while preserving underlying sinonasal anatomy, but further studies using live patient photographs are necessary to fully validate its effectiveness.
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